RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 GPATCH8Q9UKJ3 1502 aaKnown RBP13.55□□□□□ -0.24
RFC3P1-201ENST00000454568 KDM5CP41229 1560 aa13.55□□□□□ -0.24
RFC3P1-201ENST00000454568 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.24
RFC3P1-201ENST00000454568 MFSD10Q14728 455 aa13.55□□□□□ -0.24
RFC3P1-201ENST00000454568 ITSN2Q9NZM3 1697 aa13.55□□□□□ -0.24
RFC3P1-201ENST00000454568 ARHGEF12Q9NZN5 1544 aa13.54□□□□□ -0.24
RFC3P1-201ENST00000454568 FER1L4A9Z1Z3 1794 aa13.54□□□□□ -0.24
RFC3P1-201ENST00000454568 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
RFC3P1-201ENST00000454568 MLH3Q9UHC1 1453 aa13.54□□□□□ -0.24
RFC3P1-201ENST00000454568 PPP1R3GB7ZBB8 358 aa13.52□□□□□ -0.25
RFC3P1-201ENST00000454568 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
RFC3P1-201ENST00000454568 SAMD9LQ8IVG5 1584 aa13.52□□□□□ -0.25
RFC3P1-201ENST00000454568 DIP2CQ9Y2E4 1556 aa13.52□□□□□ -0.25
RFC3P1-201ENST00000454568 EHBP1L1Q8N3D4 1523 aa13.51□□□□□ -0.25
RFC3P1-201ENST00000454568 FBXW7Q969H0 707 aa13.51□□□□□ -0.25
RFC3P1-201ENST00000454568 ABCA6Q8N139 1617 aa13.5□□□□□ -0.25
RFC3P1-201ENST00000454568 SYCP2Q9BX26 1530 aa13.5□□□□□ -0.25
RFC3P1-201ENST00000454568 PLEKHH2Q8IVE3 1493 aa13.5□□□□□ -0.25
RFC3P1-201ENST00000454568 CEBPAP49715 358 aaPredicted RBP13.49□□□□□ -0.25
RFC3P1-201ENST00000454568 RABGEF1Q9UJ41 708 aa13.49□□□□□ -0.25
RFC3P1-201ENST00000454568 KIDINS220Q9ULH0 1771 aa13.48□□□□□ -0.25
RFC3P1-201ENST00000454568 HSPA2P54652 639 aa13.48□□□□□ -0.25
RFC3P1-201ENST00000454568 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
RFC3P1-201ENST00000454568 ZNF644Q9H582 1327 aaPredicted RBP13.47□□□□□ -0.25
RFC3P1-201ENST00000454568 REREQ9P2R6 1566 aa13.47□□□□□ -0.25
RFC3P1-201ENST00000454568 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
RFC3P1-201ENST00000454568 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
RFC3P1-201ENST00000454568 PHF14O94880 888 aa13.46□□□□□ -0.25
RFC3P1-201ENST00000454568 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
RFC3P1-201ENST00000454568 PCDHGA10Q9Y5H3 936 aa13.46□□□□□ -0.25
RFC3P1-201ENST00000454568 VPS8Q8N3P4 1428 aa13.46□□□□□ -0.26
RFC3P1-201ENST00000454568 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
RFC3P1-201ENST00000454568 SUPT6HQ7KZ85 1726 aaKnown RBP13.45□□□□□ -0.26
RFC3P1-201ENST00000454568 A0A0G2JS52 829 aa13.45□□□□□ -0.26
RFC3P1-201ENST00000454568 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
RFC3P1-201ENST00000454568 AGLP35573 1532 aa13.44□□□□□ -0.26
RFC3P1-201ENST00000454568 NCOA2Q15596 1464 aa13.44□□□□□ -0.26
RFC3P1-201ENST00000454568 LAPTM4BQ86VI4 370 aa13.44□□□□□ -0.26
RFC3P1-201ENST00000454568 ATP7AQ04656 1500 aa13.44□□□□□ -0.26
RFC3P1-201ENST00000454568 GGT6Q6P531 493 aa13.41□□□□□ -0.26
RFC3P1-201ENST00000454568 NYAP1Q6ZVC0 841 aa13.41□□□□□ -0.26
RFC3P1-201ENST00000454568 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
RFC3P1-201ENST00000454568 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
RFC3P1-201ENST00000454568 IRX2Q9BZI1 471 aaPredicted RBP13.4□□□□□ -0.26
RFC3P1-201ENST00000454568 A2MP01023 1474 aa13.4□□□□□ -0.26
RFC3P1-201ENST00000454568 LRRC9Q6ZRR7 1453 aa13.4□□□□□ -0.26
RFC3P1-201ENST00000454568 INO80Q9ULG1 1556 aaPredicted RBP13.4□□□□□ -0.26
RFC3P1-201ENST00000454568 PREX1Q8TCU6 1659 aa13.4□□□□□ -0.26
RFC3P1-201ENST00000454568 TSPY4P0CV99 314 aa13.39□□□□□ -0.27
RFC3P1-201ENST00000454568 TSPY10P0CW01 314 aa13.39□□□□□ -0.27
RFC3P1-201ENST00000454568 EPAS1Q99814 870 aa13.39□□□□□ -0.27
RFC3P1-201ENST00000454568 C3P01024 1663 aa13.39□□□□□ -0.27
RFC3P1-201ENST00000454568 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
RFC3P1-201ENST00000454568 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
RFC3P1-201ENST00000454568 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
RFC3P1-201ENST00000454568 CAMSAP2Q08AD1 1489 aa13.38□□□□□ -0.27
RFC3P1-201ENST00000454568 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
RFC3P1-201ENST00000454568 PROX2Q3B8N5 592 aa13.38□□□□□ -0.27
RFC3P1-201ENST00000454568 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
RFC3P1-201ENST00000454568 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
RFC3P1-201ENST00000454568 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
RFC3P1-201ENST00000454568 COL9A1P20849 921 aa13.36□□□□□ -0.27
RFC3P1-201ENST00000454568 RTEL1-TNFRSF6BF6WH68 1400 aa13.36□□□□□ -0.27
RFC3P1-201ENST00000454568 ZMYM3Q14202 1370 aa13.35□□□□□ -0.27
RFC3P1-201ENST00000454568 MAP3K1Q13233 1512 aa13.35□□□□□ -0.27
RFC3P1-201ENST00000454568 ITGBL1O95965 494 aaPredicted RBP13.35□□□□□ -0.27
RFC3P1-201ENST00000454568 SOWAHBA6NEL2 793 aa13.34□□□□□ -0.27
RFC3P1-201ENST00000454568 KIF3BO15066 747 aa13.34□□□□□ -0.27
RFC3P1-201ENST00000454568 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
RFC3P1-201ENST00000454568 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.27
RFC3P1-201ENST00000454568 PLXNC1O60486 1568 aa13.33□□□□□ -0.28
RFC3P1-201ENST00000454568 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
RFC3P1-201ENST00000454568 KIAA1468Q9P260 1216 aa13.33□□□□□ -0.28
RFC3P1-201ENST00000454568 MROH2AA6NES4 1674 aa13.32□□□□□ -0.28
RFC3P1-201ENST00000454568 C6orf132Q5T0Z8 1188 aa13.32□□□□□ -0.28
RFC3P1-201ENST00000454568 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
RFC3P1-201ENST00000454568 FBXO41Q8TF61 875 aa13.31□□□□□ -0.28
RFC3P1-201ENST00000454568 ARHGEF5Q12774 1597 aa13.31□□□□□ -0.28
RFC3P1-201ENST00000454568 MYOM3Q5VTT5 1437 aa13.3□□□□□ -0.28
RFC3P1-201ENST00000454568 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
RFC3P1-201ENST00000454568 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
RFC3P1-201ENST00000454568 BCAMP50895 628 aa13.29□□□□□ -0.28
RFC3P1-201ENST00000454568 WASHC2CQ9Y4E1 1318 aa13.29□□□□□ -0.28
RFC3P1-201ENST00000454568 NPATQ14207 1427 aa13.29□□□□□ -0.28
RFC3P1-201ENST00000454568 TRIM6-TRIM34B2RNG4 842 aa13.26□□□□□ -0.29
RFC3P1-201ENST00000454568 DPYSL4O14531 572 aa13.26□□□□□ -0.29
RFC3P1-201ENST00000454568 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
RFC3P1-201ENST00000454568 STRCQ7RTU9 1775 aa13.26□□□□□ -0.29
RFC3P1-201ENST00000454568 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
RFC3P1-201ENST00000454568 PTPRKQ15262 1439 aa13.25□□□□□ -0.29
RFC3P1-201ENST00000454568 KCNC4Q03721 635 aa13.25□□□□□ -0.29
RFC3P1-201ENST00000454568 FBXO31Q5XUX0 539 aaPredicted RBP13.23□□□□□ -0.29
RFC3P1-201ENST00000454568 SEPT9Q9UHD8 586 aaPredicted RBP13.23□□□□□ -0.29
RFC3P1-201ENST00000454568 CAMSAP1Q5T5Y3 1602 aa13.23□□□□□ -0.29
RFC3P1-201ENST00000454568 MAST1Q9Y2H9 1570 aa13.23□□□□□ -0.29
RFC3P1-201ENST00000454568 PTPN23Q9H3S7 1636 aa13.22□□□□□ -0.29
RFC3P1-201ENST00000454568 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
RFC3P1-201ENST00000454568 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
RFC3P1-201ENST00000454568 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
RFC3P1-201ENST00000454568 KDM5DQ9BY66 1539 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms