RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
GARNL3-210ENST00000453030 SPATA31E1Q6ZUB1 1445 aa17.49■□□□□ 0.39
GARNL3-210ENST00000453030 SOS2Q07890 1332 aaPredicted RBP17.48■□□□□ 0.39
GARNL3-210ENST00000453030 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
GARNL3-210ENST00000453030 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
GARNL3-210ENST00000453030 STK26Q9P289 416 aa17.46■□□□□ 0.39
GARNL3-210ENST00000453030 PXDNQ92626 1479 aa17.45■□□□□ 0.38
GARNL3-210ENST00000453030 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
GARNL3-210ENST00000453030 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
GARNL3-210ENST00000453030 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
GARNL3-210ENST00000453030 TECPR2O15040 1411 aa17.45■□□□□ 0.38
GARNL3-210ENST00000453030 PIK3C2GO75747 1445 aa17.45■□□□□ 0.38
GARNL3-210ENST00000453030 ANKRD30BQ9BXX2 1392 aa17.44■□□□□ 0.38
GARNL3-210ENST00000453030 RBM6P78332 1123 aaKnown RBP17.44■□□□□ 0.38
GARNL3-210ENST00000453030 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
GARNL3-210ENST00000453030 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
GARNL3-210ENST00000453030 MYOM2P54296 1465 aa17.44■□□□□ 0.38
GARNL3-210ENST00000453030 KIF1AQ12756 1690 aa17.43■□□□□ 0.38
GARNL3-210ENST00000453030 NUTM2FA1L443 756 aa17.43■□□□□ 0.38
GARNL3-210ENST00000453030 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
GARNL3-210ENST00000453030 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
GARNL3-210ENST00000453030 PLEKHH1Q9ULM0 1364 aa17.42■□□□□ 0.38
GARNL3-210ENST00000453030 EP400Q96L91 3159 aa17.42■□□□□ 0.38
GARNL3-210ENST00000453030 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
GARNL3-210ENST00000453030 WAPLQ7Z5K2 1190 aa17.42■□□□□ 0.38
GARNL3-210ENST00000453030 TMEM132EQ6IEE7 984 aa17.41■□□□□ 0.38
GARNL3-210ENST00000453030 YTHDC2Q9H6S0 1430 aaKnown RBP17.4■□□□□ 0.38
GARNL3-210ENST00000453030 USP21Q9UK80 565 aa17.4■□□□□ 0.38
GARNL3-210ENST00000453030 FOXO3O43524 673 aa17.39■□□□□ 0.37
GARNL3-210ENST00000453030 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
GARNL3-210ENST00000453030 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
GARNL3-210ENST00000453030 ATRNO75882 1429 aa17.38■□□□□ 0.37
GARNL3-210ENST00000453030 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
GARNL3-210ENST00000453030 ABCA3Q99758 1704 aa17.35■□□□□ 0.37
GARNL3-210ENST00000453030 NRXN1Q9ULB1 1477 aa17.35■□□□□ 0.37
GARNL3-210ENST00000453030 USP32Q8NFA0 1604 aa17.35■□□□□ 0.37
GARNL3-210ENST00000453030 ATAD2Q6PL18 1390 aa17.34■□□□□ 0.37
GARNL3-210ENST00000453030 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
GARNL3-210ENST00000453030 BCL9LQ86UU0 1499 aa17.32■□□□□ 0.36
GARNL3-210ENST00000453030 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
GARNL3-210ENST00000453030 SRCAPQ6ZRS2 3230 aa17.31■□□□□ 0.36
GARNL3-210ENST00000453030 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
GARNL3-210ENST00000453030 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
GARNL3-210ENST00000453030 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
GARNL3-210ENST00000453030 BRWD3Q6RI45 1802 aa17.3■□□□□ 0.36
GARNL3-210ENST00000453030 TNS3Q68CZ2 1445 aa17.3■□□□□ 0.36
GARNL3-210ENST00000453030 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
GARNL3-210ENST00000453030 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
GARNL3-210ENST00000453030 GLI3P10071 1580 aa17.29■□□□□ 0.36
GARNL3-210ENST00000453030 C14orf93Q9H972 538 aaKnown RBP17.29■□□□□ 0.36
GARNL3-210ENST00000453030 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
GARNL3-210ENST00000453030 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
GARNL3-210ENST00000453030 NWD2Q9ULI1 1742 aa17.27■□□□□ 0.36
GARNL3-210ENST00000453030 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
GARNL3-210ENST00000453030 PRAM1Q96QH2 718 aa17.27■□□□□ 0.36
GARNL3-210ENST00000453030 ADGRB1O14514 1584 aa17.27■□□□□ 0.35
GARNL3-210ENST00000453030 SLIT2O94813 1529 aa17.26■□□□□ 0.35
GARNL3-210ENST00000453030 ACIN1Q9UKV3 1341 aaKnown RBP17.26■□□□□ 0.35
GARNL3-210ENST00000453030 KRT28Q7Z3Y7 464 aa17.26■□□□□ 0.35
GARNL3-210ENST00000453030 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
GARNL3-210ENST00000453030 RALGAPBQ86X10 1494 aa17.25■□□□□ 0.35
GARNL3-210ENST00000453030 TRPM3Q9HCF6 1732 aaPredicted RBP17.25■□□□□ 0.35
GARNL3-210ENST00000453030 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
GARNL3-210ENST00000453030 SIRT1Q96EB6 747 aa17.25■□□□□ 0.35
GARNL3-210ENST00000453030 GJD4Q96KN9 370 aaPredicted RBP17.24■□□□□ 0.35
GARNL3-210ENST00000453030 POGKQ9P215 609 aa17.23■□□□□ 0.35
GARNL3-210ENST00000453030 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
GARNL3-210ENST00000453030 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
GARNL3-210ENST00000453030 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
GARNL3-210ENST00000453030 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
GARNL3-210ENST00000453030 CABLES1Q8TDN4 633 aa17.22■□□□□ 0.35
GARNL3-210ENST00000453030 ALS2Q96Q42 1657 aa17.22■□□□□ 0.35
GARNL3-210ENST00000453030 NRAPQ86VF7 1730 aa17.21■□□□□ 0.35
GARNL3-210ENST00000453030 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
GARNL3-210ENST00000453030 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
GARNL3-210ENST00000453030 PSME1Q06323 249 aa17.2■□□□□ 0.34
GARNL3-210ENST00000453030 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
GARNL3-210ENST00000453030 HIRIP3Q9BW71 556 aaPredicted RBP17.2■□□□□ 0.34
GARNL3-210ENST00000453030 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
GARNL3-210ENST00000453030 TULP4Q9NRJ4 1543 aa17.2■□□□□ 0.34
GARNL3-210ENST00000453030 CRYBG1Q9Y4K1 1723 aa17.19■□□□□ 0.34
GARNL3-210ENST00000453030 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
GARNL3-210ENST00000453030 KDM2AQ9Y2K7 1162 aa17.18■□□□□ 0.34
GARNL3-210ENST00000453030 MINK1Q8N4C8 1332 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-210ENST00000453030 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
GARNL3-210ENST00000453030 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
GARNL3-210ENST00000453030 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
GARNL3-210ENST00000453030 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
GARNL3-210ENST00000453030 PRR36Q9H6K5 1346 aa17.15■□□□□ 0.34
GARNL3-210ENST00000453030 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
GARNL3-210ENST00000453030 VPS72Q15906 364 aa17.13■□□□□ 0.33
GARNL3-210ENST00000453030 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
GARNL3-210ENST00000453030 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
GARNL3-210ENST00000453030 PHRF1Q9P1Y6 1649 aaKnown RBP17.12■□□□□ 0.33
GARNL3-210ENST00000453030 CCDC125Q86Z20 511 aa17.12■□□□□ 0.33
GARNL3-210ENST00000453030 SEPT12Q8IYM1 358 aa17.12■□□□□ 0.33
GARNL3-210ENST00000453030 TOPAZ1Q8N9V7 1692 aa17.12■□□□□ 0.33
GARNL3-210ENST00000453030 ATP7BP35670 1465 aa17.12■□□□□ 0.33
GARNL3-210ENST00000453030 A0A0G2JS52 829 aa17.11■□□□□ 0.33
GARNL3-210ENST00000453030 MYT1Q01538 1121 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms