RNA–Protein interactions for RNA: ENST00000451104.6

PITRM1-206, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 2 BASIC

Gene PITRM1, Length 3,183 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-206ENST00000451104 CFAP70Q5T0N1 1121 aa18.14■□□□□ 0.49
PITRM1-206ENST00000451104 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
PITRM1-206ENST00000451104 IQGAP1P46940 1657 aa18.14■□□□□ 0.49
PITRM1-206ENST00000451104 MYOM1P52179 1685 aa18.14■□□□□ 0.49
PITRM1-206ENST00000451104 RTEL1-TNFRSF6BF6WH68 1400 aa18.14■□□□□ 0.49
PITRM1-206ENST00000451104 RRP9O43818 475 aaKnown RBP18.14■□□□□ 0.49
PITRM1-206ENST00000451104 RUNDC1Q96C34 613 aa18.14■□□□□ 0.49
PITRM1-206ENST00000451104 MVPQ14764 893 aaKnown RBP18.13■□□□□ 0.49
PITRM1-206ENST00000451104 GAS2L3Q86XJ1 694 aa18.13■□□□□ 0.49
PITRM1-206ENST00000451104 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
PITRM1-206ENST00000451104 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
PITRM1-206ENST00000451104 DDX11L8A8MPP1 907 aa18.12■□□□□ 0.49
PITRM1-206ENST00000451104 TRIM44Q96DX7 344 aaPredicted RBP18.12■□□□□ 0.49
PITRM1-206ENST00000451104 PLXNC1O60486 1568 aa18.12■□□□□ 0.49
PITRM1-206ENST00000451104 AAMPQ13685 434 aa18.11■□□□□ 0.49
PITRM1-206ENST00000451104 FOXD4L1Q9NU39 408 aa18.11■□□□□ 0.49
PITRM1-206ENST00000451104 PREX2Q70Z35 1606 aa18.1■□□□□ 0.49
PITRM1-206ENST00000451104 POLR3AO14802 1390 aaPredicted RBP18.1■□□□□ 0.49
PITRM1-206ENST00000451104 ZMYM3Q14202 1370 aa18.1■□□□□ 0.49
PITRM1-206ENST00000451104 DZIP1LQ8IYY4 767 aaKnown RBP18.1■□□□□ 0.49
PITRM1-206ENST00000451104 TNPO1Q92973 898 aaKnown RBP18.1■□□□□ 0.49
PITRM1-206ENST00000451104 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
PITRM1-206ENST00000451104 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
PITRM1-206ENST00000451104 ZKSCAN2Q63HK3 967 aa18.08■□□□□ 0.49
PITRM1-206ENST00000451104 MAST1Q9Y2H9 1570 aa18.08■□□□□ 0.49
PITRM1-206ENST00000451104 SCAPERQ9BY12 1400 aa18.08■□□□□ 0.48
PITRM1-206ENST00000451104 RIMBP3CA6NJZ7 1639 aa18.08■□□□□ 0.48
PITRM1-206ENST00000451104 RIMBP3BA6NNM3 1639 aa18.08■□□□□ 0.48
PITRM1-206ENST00000451104 RIMBP3Q9UFD9 1639 aa18.08■□□□□ 0.48
PITRM1-206ENST00000451104 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
PITRM1-206ENST00000451104 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
PITRM1-206ENST00000451104 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
PITRM1-206ENST00000451104 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
PITRM1-206ENST00000451104 MTHFSP49914 203 aa18.06■□□□□ 0.48
PITRM1-206ENST00000451104 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
PITRM1-206ENST00000451104 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
PITRM1-206ENST00000451104 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
PITRM1-206ENST00000451104 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
PITRM1-206ENST00000451104 DUOX2Q9NRD8 1548 aa18.05■□□□□ 0.48
PITRM1-206ENST00000451104 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
PITRM1-206ENST00000451104 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
PITRM1-206ENST00000451104 TRIM27P14373 513 aa18.04■□□□□ 0.48
PITRM1-206ENST00000451104 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
PITRM1-206ENST00000451104 DDIT3P35638 169 aa18.04■□□□□ 0.48
PITRM1-206ENST00000451104 ADGRF5Q8IZF2 1346 aa18.04■□□□□ 0.48
PITRM1-206ENST00000451104 U2AF1L5P0DN76 240 aaPredicted RBP18.03■□□□□ 0.48
PITRM1-206ENST00000451104 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.48
PITRM1-206ENST00000451104 LNPKQ9C0E8 428 aa18.02■□□□□ 0.48
PITRM1-206ENST00000451104 CEP152O94986 1710 aa18.02■□□□□ 0.48
PITRM1-206ENST00000451104 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
PITRM1-206ENST00000451104 CD2BP2O95400 341 aaKnown RBP18.01■□□□□ 0.47
PITRM1-206ENST00000451104 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
PITRM1-206ENST00000451104 GBP4Q96PP9 640 aa18.01■□□□□ 0.47
PITRM1-206ENST00000451104 HDAC1Q13547 482 aaPredicted RBP18■□□□□ 0.47
PITRM1-206ENST00000451104 SSH1Q8WYL5 1049 aa18■□□□□ 0.47
PITRM1-206ENST00000451104 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
PITRM1-206ENST00000451104 IQSEC2Q5JU85 1478 aa18■□□□□ 0.47
PITRM1-206ENST00000451104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.47
PITRM1-206ENST00000451104 NCOA3Q9Y6Q9 1424 aa17.99■□□□□ 0.47
PITRM1-206ENST00000451104 SPHKAPQ2M3C7 1700 aa17.99■□□□□ 0.47
PITRM1-206ENST00000451104 RAB3GAP1Q15042 981 aa17.99■□□□□ 0.47
PITRM1-206ENST00000451104 KIAA1211Q6ZU35 1233 aa17.99■□□□□ 0.47
PITRM1-206ENST00000451104 SMC5Q8IY18 1101 aa17.99■□□□□ 0.47
PITRM1-206ENST00000451104 RBM25P49756 843 aaKnown RBP17.98■□□□□ 0.47
PITRM1-206ENST00000451104 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
PITRM1-206ENST00000451104 RBM42Q9BTD8 480 aaKnown RBP17.98■□□□□ 0.47
PITRM1-206ENST00000451104 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
PITRM1-206ENST00000451104 TRAK1Q9UPV9 953 aa17.98■□□□□ 0.47
PITRM1-206ENST00000451104 STAC3Q96MF2 364 aa17.98■□□□□ 0.47
PITRM1-206ENST00000451104 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
PITRM1-206ENST00000451104 CCDC27Q2M243 656 aa17.97■□□□□ 0.47
PITRM1-206ENST00000451104 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
PITRM1-206ENST00000451104 SHPRHQ149N8 1683 aa17.97■□□□□ 0.47
PITRM1-206ENST00000451104 CLTCL1P53675 1640 aa17.97■□□□□ 0.47
PITRM1-206ENST00000451104 SNX21Q969T3 373 aa17.97■□□□□ 0.47
PITRM1-206ENST00000451104 ATF7IPQ6VMQ6 1270 aa17.97■□□□□ 0.47
PITRM1-206ENST00000451104 CFAP53Q96M91 514 aa17.97■□□□□ 0.47
PITRM1-206ENST00000451104 TRPM2O94759 1503 aa17.96■□□□□ 0.47
PITRM1-206ENST00000451104 SSFA2P28290 1259 aa17.96■□□□□ 0.47
PITRM1-206ENST00000451104 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.47
PITRM1-206ENST00000451104 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
PITRM1-206ENST00000451104 KIF2CQ99661 725 aa17.95■□□□□ 0.46
PITRM1-206ENST00000451104 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
PITRM1-206ENST00000451104 TPM2P07951 284 aa17.94■□□□□ 0.46
PITRM1-206ENST00000451104 SKOR2Q2VWA4 1001 aaPredicted RBP17.94■□□□□ 0.46
PITRM1-206ENST00000451104 PTPRTO14522 1441 aa17.94■□□□□ 0.46
PITRM1-206ENST00000451104 CIZ1Q9ULV3 898 aaPredicted RBP17.94■□□□□ 0.46
PITRM1-206ENST00000451104 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
PITRM1-206ENST00000451104 RBM10P98175 930 aaKnown RBP17.93■□□□□ 0.46
PITRM1-206ENST00000451104 ZBTB40Q9NUA8 1239 aa17.93■□□□□ 0.46
PITRM1-206ENST00000451104 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
PITRM1-206ENST00000451104 KANK1Q14678 1352 aa17.93■□□□□ 0.46
PITRM1-206ENST00000451104 PLCH2O75038 1416 aa17.93■□□□□ 0.46
PITRM1-206ENST00000451104 NUCB1Q02818 461 aa17.93■□□□□ 0.46
PITRM1-206ENST00000451104 FAM69CQ0P6D2 419 aa17.93■□□□□ 0.46
PITRM1-206ENST00000451104 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
PITRM1-206ENST00000451104 DDX49Q9Y6V7 483 aaKnown RBP17.92■□□□□ 0.46
PITRM1-206ENST00000451104 UGGT1Q9NYU2 1555 aa17.92■□□□□ 0.46
PITRM1-206ENST00000451104 ZNF518AQ6AHZ1 1483 aa17.92■□□□□ 0.46
PITRM1-206ENST00000451104 CCDC173Q0VFZ6 552 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms