RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
ITGB4-203ENST00000450894 TRIM29Q14134 588 aa16.93■□□□□ 0.3
ITGB4-203ENST00000450894 RNF214Q8ND24 703 aa16.93■□□□□ 0.3
ITGB4-203ENST00000450894 PDCL3Q9H2J4 239 aa16.93■□□□□ 0.3
ITGB4-203ENST00000450894 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
ITGB4-203ENST00000450894 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
ITGB4-203ENST00000450894 PRM3Q9NNZ6 103 aa16.93■□□□□ 0.3
ITGB4-203ENST00000450894 TSPYL1Q9H0U9 437 aa16.93■□□□□ 0.3
ITGB4-203ENST00000450894 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
ITGB4-203ENST00000450894 GNAI1P63096 354 aa16.91■□□□□ 0.3
ITGB4-203ENST00000450894 SYNE3Q6ZMZ3 975 aa16.91■□□□□ 0.3
ITGB4-203ENST00000450894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.91■□□□□ 0.3
ITGB4-203ENST00000450894 K7ELQ4 463 aaPredicted RBP16.9■□□□□ 0.3
ITGB4-203ENST00000450894 HNRNPMP52272 730 aaKnown RBP eCLIP16.9■□□□□ 0.3
ITGB4-203ENST00000450894 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
ITGB4-203ENST00000450894 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
ITGB4-203ENST00000450894 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
ITGB4-203ENST00000450894 MLECQ14165 292 aa16.89■□□□□ 0.29
ITGB4-203ENST00000450894 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.29
ITGB4-203ENST00000450894 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
ITGB4-203ENST00000450894 DIAPH1O60610 1272 aaKnown RBP16.88■□□□□ 0.29
ITGB4-203ENST00000450894 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
ITGB4-203ENST00000450894 ERC2O15083 957 aa16.88■□□□□ 0.29
ITGB4-203ENST00000450894 PDIA4P13667 645 aaKnown RBP16.88■□□□□ 0.29
ITGB4-203ENST00000450894 PDCP20941 246 aa16.88■□□□□ 0.29
ITGB4-203ENST00000450894 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
ITGB4-203ENST00000450894 TDRD9Q8NDG6 1382 aaKnown RBP16.87■□□□□ 0.29
ITGB4-203ENST00000450894 CPLX1O14810 134 aa16.87■□□□□ 0.29
ITGB4-203ENST00000450894 PRPF40AO75400 957 aaKnown RBP16.87■□□□□ 0.29
ITGB4-203ENST00000450894 PSMA5P28066 241 aa16.87■□□□□ 0.29
ITGB4-203ENST00000450894 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
ITGB4-203ENST00000450894 MCM5P33992 734 aa16.86■□□□□ 0.29
ITGB4-203ENST00000450894 OLFM4Q6UX06 510 aa16.86■□□□□ 0.29
ITGB4-203ENST00000450894 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
ITGB4-203ENST00000450894 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
ITGB4-203ENST00000450894 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.86■□□□□ 0.29
ITGB4-203ENST00000450894 RIPK4P57078 832 aa16.86■□□□□ 0.29
ITGB4-203ENST00000450894 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
ITGB4-203ENST00000450894 CAGE1Q8TC20 777 aa16.86■□□□□ 0.29
ITGB4-203ENST00000450894 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
ITGB4-203ENST00000450894 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
ITGB4-203ENST00000450894 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
ITGB4-203ENST00000450894 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-203ENST00000450894 CCDC192P0DO97 292 aa16.85■□□□□ 0.29
ITGB4-203ENST00000450894 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
ITGB4-203ENST00000450894 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
ITGB4-203ENST00000450894 PDILTQ8N807 584 aa16.84■□□□□ 0.29
ITGB4-203ENST00000450894 NAP1L1P55209 391 aaKnown RBP16.83■□□□□ 0.29
ITGB4-203ENST00000450894 USP8P40818 1118 aa16.83■□□□□ 0.29
ITGB4-203ENST00000450894 EFCAB5A4FU69 1503 aa16.83■□□□□ 0.29
ITGB4-203ENST00000450894 HSP90AB3PQ58FF7 597 aa16.83■□□□□ 0.28
ITGB4-203ENST00000450894 VPS53Q5VIR6 699 aa16.83■□□□□ 0.28
ITGB4-203ENST00000450894 IFIT2P09913 472 aaKnown RBP16.83■□□□□ 0.28
ITGB4-203ENST00000450894 KIF3BO15066 747 aa16.82■□□□□ 0.28
ITGB4-203ENST00000450894 CDCA7LQ96GN5 454 aa16.82■□□□□ 0.28
ITGB4-203ENST00000450894 PPP2R1AP30153 589 aa16.82■□□□□ 0.28
ITGB4-203ENST00000450894 KIF2AO00139 706 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-203ENST00000450894 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
ITGB4-203ENST00000450894 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
ITGB4-203ENST00000450894 COG3Q96JB2 828 aa16.81■□□□□ 0.28
ITGB4-203ENST00000450894 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-203ENST00000450894 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
ITGB4-203ENST00000450894 KIAA0754O94854 1291 aa16.81■□□□□ 0.28
ITGB4-203ENST00000450894 NUTM2DQ5VT03 806 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-203ENST00000450894 AXDND1Q5T1B0 1012 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-203ENST00000450894 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
ITGB4-203ENST00000450894 CSB-PGBD3P0DP91 1061 aa16.8■□□□□ 0.28
ITGB4-203ENST00000450894 MYO6Q9UM54 1294 aa16.8■□□□□ 0.28
ITGB4-203ENST00000450894 EIF3JO75822 258 aaKnown RBP16.8■□□□□ 0.28
ITGB4-203ENST00000450894 IGF1RP08069 1367 aa16.8■□□□□ 0.28
ITGB4-203ENST00000450894 SMC2O95347 1197 aa16.79■□□□□ 0.28
ITGB4-203ENST00000450894 DEF6Q9H4E7 631 aa16.79■□□□□ 0.28
ITGB4-203ENST00000450894 HIP1O00291 1037 aa16.79■□□□□ 0.28
ITGB4-203ENST00000450894 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.79■□□□□ 0.28
ITGB4-203ENST00000450894 SDF4Q9BRK5 362 aa16.79■□□□□ 0.28
ITGB4-203ENST00000450894 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
ITGB4-203ENST00000450894 TIAM1Q13009 1591 aa16.78■□□□□ 0.28
ITGB4-203ENST00000450894 C11orf95C9JLR9 678 aaPredicted RBP16.78■□□□□ 0.28
ITGB4-203ENST00000450894 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
ITGB4-203ENST00000450894 ERLIN1O75477 346 aa16.78■□□□□ 0.28
ITGB4-203ENST00000450894 SPC24Q8NBT2 197 aa16.78■□□□□ 0.28
ITGB4-203ENST00000450894 AMPHP49418 695 aa16.78■□□□□ 0.28
ITGB4-203ENST00000450894 KINO60870 393 aaKnown RBP16.77■□□□□ 0.28
ITGB4-203ENST00000450894 SMARCE1Q969G3 411 aa16.77■□□□□ 0.28
ITGB4-203ENST00000450894 ZNF396Q96N95 335 aaPredicted RBP16.77■□□□□ 0.27
ITGB4-203ENST00000450894 TRDNQ13061 729 aa16.76■□□□□ 0.27
ITGB4-203ENST00000450894 CCDC9Q9Y3X0 531 aaKnown RBP16.76■□□□□ 0.27
ITGB4-203ENST00000450894 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
ITGB4-203ENST00000450894 NEK4P51957 841 aa16.76■□□□□ 0.27
ITGB4-203ENST00000450894 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
ITGB4-203ENST00000450894 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
ITGB4-203ENST00000450894 DYNC1I1O14576 645 aa16.76■□□□□ 0.27
ITGB4-203ENST00000450894 CLCN1P35523 988 aa16.76■□□□□ 0.27
ITGB4-203ENST00000450894 PLCD4Q9BRC7 762 aa16.75■□□□□ 0.27
ITGB4-203ENST00000450894 DHX29Q7Z478 1369 aaKnown RBP16.75■□□□□ 0.27
ITGB4-203ENST00000450894 NEXNQ0ZGT2 675 aa16.75■□□□□ 0.27
ITGB4-203ENST00000450894 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.75■□□□□ 0.27
ITGB4-203ENST00000450894 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
ITGB4-203ENST00000450894 CALCOCO1Q9P1Z2 691 aa16.75■□□□□ 0.27
ITGB4-203ENST00000450894 GNAI3P08754 354 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms