RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 ESCO1Q5FWF5 840 aa24.56■■□□□ 1.52
RAB11FIP3-204ENST00000449879 ADAMTS2O95450 1211 aa24.55■■□□□ 1.52
RAB11FIP3-204ENST00000449879 LRPPRCP42704 1394 aaKnown RBP24.54■■□□□ 1.52
RAB11FIP3-204ENST00000449879 NUTM2FA1L443 756 aa24.53■■□□□ 1.52
RAB11FIP3-204ENST00000449879 NGLY1Q96IV0 654 aa24.53■■□□□ 1.52
RAB11FIP3-204ENST00000449879 ABCC11Q96J66 1382 aa24.52■■□□□ 1.52
RAB11FIP3-204ENST00000449879 IFT172Q9UG01 1749 aa24.52■■□□□ 1.52
RAB11FIP3-204ENST00000449879 QTRT2Q9H974 415 aaKnown RBP24.51■■□□□ 1.51
RAB11FIP3-204ENST00000449879 PIK3C2GO75747 1445 aa24.51■■□□□ 1.51
RAB11FIP3-204ENST00000449879 FOXO3O43524 673 aa24.5■■□□□ 1.51
RAB11FIP3-204ENST00000449879 PLEKHH1Q9ULM0 1364 aa24.5■■□□□ 1.51
RAB11FIP3-204ENST00000449879 TECPR2O15040 1411 aa24.5■■□□□ 1.51
RAB11FIP3-204ENST00000449879 LAMC1P11047 1609 aa24.5■■□□□ 1.51
RAB11FIP3-204ENST00000449879 C14orf93Q9H972 538 aaKnown RBP24.49■■□□□ 1.51
RAB11FIP3-204ENST00000449879 NPHP3Q7Z494 1330 aa24.49■■□□□ 1.51
RAB11FIP3-204ENST00000449879 RAB3GAP2Q9H2M9 1393 aa24.49■■□□□ 1.51
RAB11FIP3-204ENST00000449879 XPCQ01831 940 aaPredicted RBP24.48■■□□□ 1.51
RAB11FIP3-204ENST00000449879 CDC42BPGQ6DT37 1551 aa24.48■■□□□ 1.51
RAB11FIP3-204ENST00000449879 YTHDC2Q9H6S0 1430 aaKnown RBP24.47■■□□□ 1.51
RAB11FIP3-204ENST00000449879 CFAP70Q5T0N1 1121 aa24.47■■□□□ 1.51
RAB11FIP3-204ENST00000449879 UPF1Q92900 1129 aaKnown RBP eCLIP24.46■■□□□ 1.51
RAB11FIP3-204ENST00000449879 RBM6P78332 1123 aaKnown RBP24.45■■□□□ 1.5
RAB11FIP3-204ENST00000449879 SIRT1Q96EB6 747 aa24.43■■□□□ 1.5
RAB11FIP3-204ENST00000449879 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
RAB11FIP3-204ENST00000449879 USP21Q9UK80 565 aa24.42■■□□□ 1.5
RAB11FIP3-204ENST00000449879 CDK12Q9NYV4 1490 aaPredicted RBP24.42■■□□□ 1.5
RAB11FIP3-204ENST00000449879 KNDC1Q76NI1 1749 aa24.41■■□□□ 1.5
RAB11FIP3-204ENST00000449879 SAFB2Q14151 953 aaKnown RBP eCLIP24.4■■□□□ 1.5
RAB11FIP3-204ENST00000449879 PXDNQ92626 1479 aa24.39■■□□□ 1.5
RAB11FIP3-204ENST00000449879 NRXN1Q9ULB1 1477 aa24.38■■□□□ 1.49
RAB11FIP3-204ENST00000449879 MYOM2P54296 1465 aa24.38■■□□□ 1.49
RAB11FIP3-204ENST00000449879 FNBP4Q8N3X1 1017 aaPredicted RBP24.37■■□□□ 1.49
RAB11FIP3-204ENST00000449879 PRAM1Q96QH2 718 aa24.37■■□□□ 1.49
RAB11FIP3-204ENST00000449879 KDM2AQ9Y2K7 1162 aa24.37■■□□□ 1.49
RAB11FIP3-204ENST00000449879 TRPC5Q9UL62 973 aaPredicted RBP24.36■■□□□ 1.49
RAB11FIP3-204ENST00000449879 RGS12O14924 1447 aa24.35■■□□□ 1.49
RAB11FIP3-204ENST00000449879 KRT28Q7Z3Y7 464 aa24.35■■□□□ 1.49
RAB11FIP3-204ENST00000449879 POGKQ9P215 609 aa24.35■■□□□ 1.49
RAB11FIP3-204ENST00000449879 COL22A1Q8NFW1 1626 aaPredicted RBP24.35■■□□□ 1.49
RAB11FIP3-204ENST00000449879 FMN2Q9NZ56 1722 aa24.34■■□□□ 1.49
RAB11FIP3-204ENST00000449879 DCAF11Q8TEB1 546 aa24.33■■□□□ 1.49
RAB11FIP3-204ENST00000449879 PHF8Q9UPP1 1060 aa24.33■■□□□ 1.49
RAB11FIP3-204ENST00000449879 SPATA31A3Q5VYP0 1347 aa24.32■■□□□ 1.48
RAB11FIP3-204ENST00000449879 TRAK1Q9UPV9 953 aa24.31■■□□□ 1.48
RAB11FIP3-204ENST00000449879 HRCP23327 699 aa24.3■■□□□ 1.48
RAB11FIP3-204ENST00000449879 RGPD8O14715 1765 aaPredicted RBP24.29■■□□□ 1.48
RAB11FIP3-204ENST00000449879 PSME1Q06323 249 aa24.28■■□□□ 1.48
RAB11FIP3-204ENST00000449879 PLEKHG5O94827 1062 aa24.27■■□□□ 1.48
RAB11FIP3-204ENST00000449879 KIF1AQ12756 1690 aa24.27■■□□□ 1.48
RAB11FIP3-204ENST00000449879 ATRNO75882 1429 aa24.27■■□□□ 1.48
RAB11FIP3-204ENST00000449879 HIRIP3Q9BW71 556 aaPredicted RBP24.26■■□□□ 1.47
RAB11FIP3-204ENST00000449879 BCL9LQ86UU0 1499 aa24.26■■□□□ 1.47
RAB11FIP3-204ENST00000449879 HAP1P54257 671 aaPredicted RBP24.25■■□□□ 1.47
RAB11FIP3-204ENST00000449879 LMOD2Q6P5Q4 547 aa24.25■■□□□ 1.47
RAB11FIP3-204ENST00000449879 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
RAB11FIP3-204ENST00000449879 DLC1Q96QB1 1528 aa24.24■■□□□ 1.47
RAB11FIP3-204ENST00000449879 CABLES1Q8TDN4 633 aa24.23■■□□□ 1.47
RAB11FIP3-204ENST00000449879 STAC3Q96MF2 364 aa24.23■■□□□ 1.47
RAB11FIP3-204ENST00000449879 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
RAB11FIP3-204ENST00000449879 ADGRB1O14514 1584 aa24.23■■□□□ 1.47
RAB11FIP3-204ENST00000449879 MARF1Q9Y4F3 1742 aaKnown RBP24.22■■□□□ 1.47
RAB11FIP3-204ENST00000449879 GJD4Q96KN9 370 aaPredicted RBP24.22■■□□□ 1.47
RAB11FIP3-204ENST00000449879 TNS3Q68CZ2 1445 aa24.2■■□□□ 1.46
RAB11FIP3-204ENST00000449879 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
RAB11FIP3-204ENST00000449879 UNC5CLQ8IV45 518 aa24.2■■□□□ 1.46
RAB11FIP3-204ENST00000449879 ANKARQ7Z5J8 1434 aa24.18■■□□□ 1.46
RAB11FIP3-204ENST00000449879 SBNO1A3KN83 1393 aa24.17■■□□□ 1.46
RAB11FIP3-204ENST00000449879 WASLO00401 505 aaPredicted RBP24.16■■□□□ 1.46
RAB11FIP3-204ENST00000449879 USP32Q8NFA0 1604 aa24.15■■□□□ 1.46
RAB11FIP3-204ENST00000449879 ARHGEF10O15013 1369 aa24.15■■□□□ 1.46
RAB11FIP3-204ENST00000449879 SLIT2O94813 1529 aa24.15■■□□□ 1.46
RAB11FIP3-204ENST00000449879 PRR36Q9H6K5 1346 aa24.14■■□□□ 1.46
RAB11FIP3-204ENST00000449879 ADGRB2O60241 1585 aa24.13■■□□□ 1.45
RAB11FIP3-204ENST00000449879 EIF3AQ14152 1382 aaKnown RBP24.12■■□□□ 1.45
RAB11FIP3-204ENST00000449879 GPRASP1Q5JY77 1395 aa24.12■■□□□ 1.45
RAB11FIP3-204ENST00000449879 NGDNQ8NEJ9 315 aaKnown RBP24.11■■□□□ 1.45
RAB11FIP3-204ENST00000449879 CCDC9Q9Y3X0 531 aaKnown RBP24.1■■□□□ 1.45
RAB11FIP3-204ENST00000449879 RALGAPBQ86X10 1494 aa24.1■■□□□ 1.45
RAB11FIP3-204ENST00000449879 FAM83GA6ND36 823 aa24.09■■□□□ 1.45
RAB11FIP3-204ENST00000449879 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.09■■□□□ 1.45
RAB11FIP3-204ENST00000449879 VPS72Q15906 364 aa24.08■■□□□ 1.45
RAB11FIP3-204ENST00000449879 TULP4Q9NRJ4 1543 aa24.08■■□□□ 1.45
RAB11FIP3-204ENST00000449879 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
RAB11FIP3-204ENST00000449879 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
RAB11FIP3-204ENST00000449879 GLI3P10071 1580 aa24.06■■□□□ 1.44
RAB11FIP3-204ENST00000449879 CCDC125Q86Z20 511 aa24.05■■□□□ 1.44
RAB11FIP3-204ENST00000449879 SEPT12Q8IYM1 358 aa24.04■■□□□ 1.44
RAB11FIP3-204ENST00000449879 CDK19Q9BWU1 502 aa24.04■■□□□ 1.44
RAB11FIP3-204ENST00000449879 NBPF1Q3BBV0 1214 aa24.03■■□□□ 1.44
RAB11FIP3-204ENST00000449879 ARHGEF28Q8N1W1 1705 aaKnown RBP24.03■■□□□ 1.44
RAB11FIP3-204ENST00000449879 ABCA3Q99758 1704 aa24.02■■□□□ 1.44
RAB11FIP3-204ENST00000449879 TRPM3Q9HCF6 1732 aaPredicted RBP24.02■■□□□ 1.44
RAB11FIP3-204ENST00000449879 BTG4Q9NY30 223 aa24.01■■□□□ 1.43
RAB11FIP3-204ENST00000449879 PLCH1Q4KWH8 1693 aa24.01■■□□□ 1.43
RAB11FIP3-204ENST00000449879 NWD2Q9ULI1 1742 aa23.99■■□□□ 1.43
RAB11FIP3-204ENST00000449879 ONECUT3O60422 494 aaPredicted RBP23.99■■□□□ 1.43
RAB11FIP3-204ENST00000449879 EP400Q96L91 3159 aa23.99■■□□□ 1.43
RAB11FIP3-204ENST00000449879 ALS2Q96Q42 1657 aa23.99■■□□□ 1.43
RAB11FIP3-204ENST00000449879 A0A0G2JS52 829 aa23.98■■□□□ 1.43
RAB11FIP3-204ENST00000449879 MYT1Q01538 1121 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms