RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 LAMC1P11047 1609 aa36.58■■■■□ 3.45
PMS1-214ENST00000446877 ATAD2Q6PL18 1390 aa36.55■■■■□ 3.44
PMS1-214ENST00000446877 FOXD1Q16676 465 aa36.53■■■■□ 3.44
PMS1-214ENST00000446877 STK26Q9P289 416 aa36.53■■■■□ 3.44
PMS1-214ENST00000446877 FOXO3O43524 673 aa36.52■■■■□ 3.44
PMS1-214ENST00000446877 RGL3Q3MIN7 710 aa36.51■■■■□ 3.44
PMS1-214ENST00000446877 ADGRF5Q8IZF2 1346 aa36.5■■■■□ 3.43
PMS1-214ENST00000446877 LRPPRCP42704 1394 aaKnown RBP36.49■■■■□ 3.43
PMS1-214ENST00000446877 XPCQ01831 940 aaPredicted RBP36.48■■■■□ 3.43
PMS1-214ENST00000446877 WAPLQ7Z5K2 1190 aa36.47■■■■□ 3.43
PMS1-214ENST00000446877 CCDC144AA2RUR9 1427 aa36.46■■■■□ 3.43
PMS1-214ENST00000446877 NUTM2FA1L443 756 aa36.46■■■■□ 3.43
PMS1-214ENST00000446877 ATRNO75882 1429 aa36.45■■■■□ 3.43
PMS1-214ENST00000446877 PPLO60437 1756 aa36.44■■■■□ 3.42
PMS1-214ENST00000446877 CDC42BPGQ6DT37 1551 aa36.44■■■■□ 3.42
PMS1-214ENST00000446877 MYOM2P54296 1465 aa36.43■■■■□ 3.42
PMS1-214ENST00000446877 ANKRD30BQ9BXX2 1392 aa36.42■■■■□ 3.42
PMS1-214ENST00000446877 SRCAPQ6ZRS2 3230 aa36.41■■■■□ 3.42
PMS1-214ENST00000446877 COL22A1Q8NFW1 1626 aaPredicted RBP36.41■■■■□ 3.42
PMS1-214ENST00000446877 PXDNQ92626 1479 aa36.4■■■■□ 3.42
PMS1-214ENST00000446877 TMEM132EQ6IEE7 984 aa36.4■■■■□ 3.42
PMS1-214ENST00000446877 ABCC11Q96J66 1382 aa36.39■■■■□ 3.42
PMS1-214ENST00000446877 TECPR2O15040 1411 aa36.37■■■■□ 3.41
PMS1-214ENST00000446877 MPHOSPH9Q99550 1183 aa36.37■■■■□ 3.41
PMS1-214ENST00000446877 GJD4Q96KN9 370 aaPredicted RBP36.36■■■■□ 3.41
PMS1-214ENST00000446877 BCL9LQ86UU0 1499 aa36.36■■■■□ 3.41
PMS1-214ENST00000446877 CCDC125Q86Z20 511 aa36.35■■■■□ 3.41
PMS1-214ENST00000446877 SPATA31E1Q6ZUB1 1445 aa36.34■■■■□ 3.41
PMS1-214ENST00000446877 ZRANB1Q9UGI0 708 aa36.34■■■■□ 3.41
PMS1-214ENST00000446877 PLEKHH1Q9ULM0 1364 aa36.31■■■■□ 3.4
PMS1-214ENST00000446877 SPATA31A3Q5VYP0 1347 aa36.3■■■■□ 3.4
PMS1-214ENST00000446877 KRT28Q7Z3Y7 464 aa36.29■■■■□ 3.4
PMS1-214ENST00000446877 UNC5CLQ8IV45 518 aa36.28■■■■□ 3.4
PMS1-214ENST00000446877 SIRT1Q96EB6 747 aa36.27■■■■□ 3.4
PMS1-214ENST00000446877 PIK3C2GO75747 1445 aa36.25■■■■□ 3.39
PMS1-214ENST00000446877 YTHDC2Q9H6S0 1430 aaKnown RBP36.25■■■■□ 3.39
PMS1-214ENST00000446877 HAP1P54257 671 aaPredicted RBP36.25■■■■□ 3.39
PMS1-214ENST00000446877 EP400Q96L91 3159 aa36.25■■■■□ 3.39
PMS1-214ENST00000446877 PSME1Q06323 249 aa36.23■■■■□ 3.39
PMS1-214ENST00000446877 C14orf93Q9H972 538 aaKnown RBP36.21■■■■□ 3.39
PMS1-214ENST00000446877 PHF8Q9UPP1 1060 aa36.21■■■■□ 3.39
PMS1-214ENST00000446877 DHX57Q6P158 1386 aaKnown RBP36.17■■■■□ 3.38
PMS1-214ENST00000446877 ACIN1Q9UKV3 1341 aaKnown RBP36.17■■■■□ 3.38
PMS1-214ENST00000446877 SLIT2O94813 1529 aa36.15■■■■□ 3.38
PMS1-214ENST00000446877 RALGAPBQ86X10 1494 aa36.15■■■■□ 3.38
PMS1-214ENST00000446877 KNDC1Q76NI1 1749 aa36.14■■■■□ 3.38
PMS1-214ENST00000446877 MARF1Q9Y4F3 1742 aaKnown RBP36.14■■■■□ 3.38
PMS1-214ENST00000446877 PLEKHG5O94827 1062 aa36.14■■■■□ 3.38
PMS1-214ENST00000446877 CFAP70Q5T0N1 1121 aa36.14■■■■□ 3.38
PMS1-214ENST00000446877 LMOD2Q6P5Q4 547 aa36.14■■■■□ 3.38
PMS1-214ENST00000446877 FMN2Q9NZ56 1722 aa36.13■■■■□ 3.37
PMS1-214ENST00000446877 KIF1AQ12756 1690 aa36.13■■■■□ 3.37
PMS1-214ENST00000446877 IFT172Q9UG01 1749 aa36.12■■■■□ 3.37
PMS1-214ENST00000446877 SAFB2Q14151 953 aaKnown RBP eCLIP36.12■■■■□ 3.37
PMS1-214ENST00000446877 CABLES1Q8TDN4 633 aa36.12■■■■□ 3.37
PMS1-214ENST00000446877 PRAM1Q96QH2 718 aa36.11■■■■□ 3.37
PMS1-214ENST00000446877 TNS3Q68CZ2 1445 aa36.1■■■■□ 3.37
PMS1-214ENST00000446877 CCDC9Q9Y3X0 531 aaKnown RBP36.1■■■■□ 3.37
PMS1-214ENST00000446877 VPS72Q15906 364 aa36.09■■■■□ 3.37
PMS1-214ENST00000446877 POGKQ9P215 609 aa36.09■■■■□ 3.37
PMS1-214ENST00000446877 SF3B2Q13435 895 aaKnown RBP36.08■■■■□ 3.37
PMS1-214ENST00000446877 SEPT12Q8IYM1 358 aa36.08■■■■□ 3.37
PMS1-214ENST00000446877 BLMP54132 1417 aaPredicted RBP36.08■■■■□ 3.37
PMS1-214ENST00000446877 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.06■■■■□ 3.36
PMS1-214ENST00000446877 SBNO1A3KN83 1393 aa36.06■■■■□ 3.36
PMS1-214ENST00000446877 ARHGEF10O15013 1369 aa36.05■■■■□ 3.36
PMS1-214ENST00000446877 GLI3P10071 1580 aa36.05■■■■□ 3.36
PMS1-214ENST00000446877 USP32Q8NFA0 1604 aa36.04■■■■□ 3.36
PMS1-214ENST00000446877 PMFBP1Q8TBY8 1022 aa36.02■■■■□ 3.36
PMS1-214ENST00000446877 NRXN1Q9ULB1 1477 aa36.02■■■■□ 3.36
PMS1-214ENST00000446877 ONECUT3O60422 494 aaPredicted RBP35.99■■■■□ 3.35
PMS1-214ENST00000446877 DEFB132Q7Z7B7 95 aa35.99■■■■□ 3.35
PMS1-214ENST00000446877 KRT27Q7Z3Y8 459 aa35.98■■■■□ 3.35
PMS1-214ENST00000446877 FAM83GA6ND36 823 aa35.97■■■■□ 3.35
PMS1-214ENST00000446877 ANKARQ7Z5J8 1434 aa35.95■■■■□ 3.35
PMS1-214ENST00000446877 A0A0G2JS52 829 aa35.95■■■■□ 3.35
PMS1-214ENST00000446877 MYT1Q01538 1121 aa35.95■■■■□ 3.35
PMS1-214ENST00000446877 TRAK1Q9UPV9 953 aa35.93■■■■□ 3.34
PMS1-214ENST00000446877 GPRASP1Q5JY77 1395 aa35.91■■■■□ 3.34
PMS1-214ENST00000446877 HIRIP3Q9BW71 556 aaPredicted RBP35.91■■■■□ 3.34
PMS1-214ENST00000446877 DLC1Q96QB1 1528 aa35.9■■■■□ 3.34
PMS1-214ENST00000446877 RGPD8O14715 1765 aaPredicted RBP35.89■■■■□ 3.34
PMS1-214ENST00000446877 BTG4Q9NY30 223 aa35.88■■■■□ 3.33
PMS1-214ENST00000446877 EIF3AQ14152 1382 aaKnown RBP35.88■■■■□ 3.33
PMS1-214ENST00000446877 MINK1Q8N4C8 1332 aaPredicted RBP35.86■■■■□ 3.33
PMS1-214ENST00000446877 FAM98CQ17RN3 349 aaKnown RBP35.85■■■■□ 3.33
PMS1-214ENST00000446877 KDM2AQ9Y2K7 1162 aa35.85■■■■□ 3.33
PMS1-214ENST00000446877 NWD2Q9ULI1 1742 aa35.84■■■■□ 3.33
PMS1-214ENST00000446877 PLCH1Q4KWH8 1693 aa35.82■■■■□ 3.33
PMS1-214ENST00000446877 BAG6P46379 1132 aa35.82■■■■□ 3.32
PMS1-214ENST00000446877 NGDNQ8NEJ9 315 aaKnown RBP35.82■■■■□ 3.32
PMS1-214ENST00000446877 BRWD3Q6RI45 1802 aa35.82■■■■□ 3.32
PMS1-214ENST00000446877 WASLO00401 505 aaPredicted RBP35.81■■■■□ 3.32
PMS1-214ENST00000446877 DCAF11Q8TEB1 546 aa35.81■■■■□ 3.32
PMS1-214ENST00000446877 RAB3GAP2Q9H2M9 1393 aa35.8■■■■□ 3.32
PMS1-214ENST00000446877 PAK3O75914 559 aaPredicted RBP35.79■■■■□ 3.32
PMS1-214ENST00000446877 PRR36Q9H6K5 1346 aa35.79■■■■□ 3.32
PMS1-214ENST00000446877 ADGRB1O14514 1584 aa35.77■■■■□ 3.32
PMS1-214ENST00000446877 ADGRB2O60241 1585 aa35.77■■■■□ 3.32
PMS1-214ENST00000446877 STAC3Q96MF2 364 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms