RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 CDC42BPGQ6DT37 1551 aa31.09■■■□□ 2.57
VSX1-206ENST00000444511 WAPLQ7Z5K2 1190 aa31.08■■■□□ 2.57
VSX1-206ENST00000444511 ABCC11Q96J66 1382 aa31.07■■■□□ 2.56
VSX1-206ENST00000444511 LAMC1P11047 1609 aa31.06■■■□□ 2.56
VSX1-206ENST00000444511 SOS2Q07890 1332 aaPredicted RBP31.06■■■□□ 2.56
VSX1-206ENST00000444511 ESCO1Q5FWF5 840 aa31.05■■■□□ 2.56
VSX1-206ENST00000444511 AFF2P51816 1311 aa31.04■■■□□ 2.56
VSX1-206ENST00000444511 C8orf37Q96NL8 207 aa31.03■■■□□ 2.56
VSX1-206ENST00000444511 YTHDC2Q9H6S0 1430 aaKnown RBP31.03■■■□□ 2.56
VSX1-206ENST00000444511 RXRBP28702 533 aa31.01■■■□□ 2.55
VSX1-206ENST00000444511 C14orf93Q9H972 538 aaKnown RBP31.01■■■□□ 2.55
VSX1-206ENST00000444511 PLEKHH1Q9ULM0 1364 aa31.01■■■□□ 2.55
VSX1-206ENST00000444511 KNDC1Q76NI1 1749 aa31.01■■■□□ 2.55
VSX1-206ENST00000444511 MYOM2P54296 1465 aa31.01■■■□□ 2.55
VSX1-206ENST00000444511 NPHP3Q7Z494 1330 aa30.99■■■□□ 2.55
VSX1-206ENST00000444511 NRXN1Q9ULB1 1477 aa30.99■■■□□ 2.55
VSX1-206ENST00000444511 NUTM2FA1L443 756 aa30.98■■■□□ 2.55
VSX1-206ENST00000444511 CFAP70Q5T0N1 1121 aa30.98■■■□□ 2.55
VSX1-206ENST00000444511 ADAMTS2O95450 1211 aa30.97■■■□□ 2.55
VSX1-206ENST00000444511 DHX57Q6P158 1386 aaKnown RBP30.96■■■□□ 2.55
VSX1-206ENST00000444511 SIRT1Q96EB6 747 aa30.95■■■□□ 2.55
VSX1-206ENST00000444511 FOXO3O43524 673 aa30.94■■■□□ 2.54
VSX1-206ENST00000444511 NGLY1Q96IV0 654 aa30.94■■■□□ 2.54
VSX1-206ENST00000444511 PXDNQ92626 1479 aa30.9■■■□□ 2.54
VSX1-206ENST00000444511 XPCQ01831 940 aaPredicted RBP30.9■■■□□ 2.54
VSX1-206ENST00000444511 QTRT2Q9H974 415 aaKnown RBP30.9■■■□□ 2.54
VSX1-206ENST00000444511 CDK12Q9NYV4 1490 aaPredicted RBP30.89■■■□□ 2.54
VSX1-206ENST00000444511 HRCP23327 699 aa30.89■■■□□ 2.54
VSX1-206ENST00000444511 FMN2Q9NZ56 1722 aa30.87■■■□□ 2.53
VSX1-206ENST00000444511 RBM6P78332 1123 aaKnown RBP30.86■■■□□ 2.53
VSX1-206ENST00000444511 PRAM1Q96QH2 718 aa30.86■■■□□ 2.53
VSX1-206ENST00000444511 COL22A1Q8NFW1 1626 aaPredicted RBP30.86■■■□□ 2.53
VSX1-206ENST00000444511 SAFB2Q14151 953 aaKnown RBP eCLIP30.85■■■□□ 2.53
VSX1-206ENST00000444511 KDM2AQ9Y2K7 1162 aa30.84■■■□□ 2.53
VSX1-206ENST00000444511 DCAF11Q8TEB1 546 aa30.83■■■□□ 2.53
VSX1-206ENST00000444511 POGKQ9P215 609 aa30.83■■■□□ 2.53
VSX1-206ENST00000444511 USP21Q9UK80 565 aa30.82■■■□□ 2.52
VSX1-206ENST00000444511 KIF1AQ12756 1690 aa30.81■■■□□ 2.52
VSX1-206ENST00000444511 DLC1Q96QB1 1528 aa30.8■■■□□ 2.52
VSX1-206ENST00000444511 UPF1Q92900 1129 aaKnown RBP eCLIP30.8■■■□□ 2.52
VSX1-206ENST00000444511 FNBP4Q8N3X1 1017 aaPredicted RBP30.78■■■□□ 2.52
VSX1-206ENST00000444511 RGS12O14924 1447 aa30.78■■■□□ 2.52
VSX1-206ENST00000444511 ADGRB1O14514 1584 aa30.78■■■□□ 2.52
VSX1-206ENST00000444511 KRT28Q7Z3Y7 464 aa30.77■■■□□ 2.52
VSX1-206ENST00000444511 STAC3Q96MF2 364 aa30.77■■■□□ 2.52
VSX1-206ENST00000444511 TRPC5Q9UL62 973 aaPredicted RBP30.77■■■□□ 2.52
VSX1-206ENST00000444511 PHF8Q9UPP1 1060 aa30.77■■■□□ 2.52
VSX1-206ENST00000444511 TRAK1Q9UPV9 953 aa30.76■■■□□ 2.51
VSX1-206ENST00000444511 SPATA31A3Q5VYP0 1347 aa30.75■■■□□ 2.51
VSX1-206ENST00000444511 PSME1Q06323 249 aa30.72■■■□□ 2.51
VSX1-206ENST00000444511 ANKARQ7Z5J8 1434 aa30.69■■■□□ 2.5
VSX1-206ENST00000444511 ADGRB2O60241 1585 aa30.68■■■□□ 2.5
VSX1-206ENST00000444511 ATRNO75882 1429 aa30.68■■■□□ 2.5
VSX1-206ENST00000444511 HIRIP3Q9BW71 556 aaPredicted RBP30.68■■■□□ 2.5
VSX1-206ENST00000444511 RGPD8O14715 1765 aaPredicted RBP30.68■■■□□ 2.5
VSX1-206ENST00000444511 MINK1Q8N4C8 1332 aaPredicted RBP30.68■■■□□ 2.5
VSX1-206ENST00000444511 TNS3Q68CZ2 1445 aa30.67■■■□□ 2.5
VSX1-206ENST00000444511 BCL9LQ86UU0 1499 aa30.65■■■□□ 2.5
VSX1-206ENST00000444511 HAP1P54257 671 aaPredicted RBP30.65■■■□□ 2.5
VSX1-206ENST00000444511 PMFBP1Q8TBY8 1022 aa30.65■■■□□ 2.5
VSX1-206ENST00000444511 MARF1Q9Y4F3 1742 aaKnown RBP30.64■■■□□ 2.5
VSX1-206ENST00000444511 SBNO1A3KN83 1393 aa30.64■■■□□ 2.5
VSX1-206ENST00000444511 EIF3AQ14152 1382 aaKnown RBP30.64■■■□□ 2.5
VSX1-206ENST00000444511 LMOD2Q6P5Q4 547 aa30.63■■■□□ 2.49
VSX1-206ENST00000444511 USP32Q8NFA0 1604 aa30.62■■■□□ 2.49
VSX1-206ENST00000444511 ARHGEF10O15013 1369 aa30.6■■■□□ 2.49
VSX1-206ENST00000444511 PLEKHG5O94827 1062 aa30.6■■■□□ 2.49
VSX1-206ENST00000444511 WASLO00401 505 aaPredicted RBP30.59■■■□□ 2.49
VSX1-206ENST00000444511 ATAD2Q6PL18 1390 aa30.58■■■□□ 2.49
VSX1-206ENST00000444511 CABLES1Q8TDN4 633 aa30.58■■■□□ 2.49
VSX1-206ENST00000444511 TULP4Q9NRJ4 1543 aa30.57■■■□□ 2.49
VSX1-206ENST00000444511 UNC5CLQ8IV45 518 aa30.57■■■□□ 2.48
VSX1-206ENST00000444511 GJD4Q96KN9 370 aaPredicted RBP30.57■■■□□ 2.48
VSX1-206ENST00000444511 PRR36Q9H6K5 1346 aa30.56■■■□□ 2.48
VSX1-206ENST00000444511 SLIT2O94813 1529 aa30.56■■■□□ 2.48
VSX1-206ENST00000444511 GPRASP1Q5JY77 1395 aa30.55■■■□□ 2.48
VSX1-206ENST00000444511 ARHGEF28Q8N1W1 1705 aaKnown RBP30.52■■■□□ 2.48
VSX1-206ENST00000444511 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.52■■■□□ 2.48
VSX1-206ENST00000444511 NGDNQ8NEJ9 315 aaKnown RBP30.5■■■□□ 2.47
VSX1-206ENST00000444511 RALGAPBQ86X10 1494 aa30.48■■■□□ 2.47
VSX1-206ENST00000444511 NUDT16Q96DE0 195 aaKnown RBP30.46■■■□□ 2.47
VSX1-206ENST00000444511 TRPM3Q9HCF6 1732 aaPredicted RBP30.46■■■□□ 2.47
VSX1-206ENST00000444511 ABCA3Q99758 1704 aa30.45■■■□□ 2.47
VSX1-206ENST00000444511 KIAA1210Q9ULL0 1709 aa30.44■■■□□ 2.46
VSX1-206ENST00000444511 GLI3P10071 1580 aa30.44■■■□□ 2.46
VSX1-206ENST00000444511 ATP7BP35670 1465 aa30.44■■■□□ 2.46
VSX1-206ENST00000444511 PAK3O75914 559 aaPredicted RBP30.43■■■□□ 2.46
VSX1-206ENST00000444511 VPS72Q15906 364 aa30.43■■■□□ 2.46
VSX1-206ENST00000444511 CDK19Q9BWU1 502 aa30.43■■■□□ 2.46
VSX1-206ENST00000444511 NBPF1Q3BBV0 1214 aa30.42■■■□□ 2.46
VSX1-206ENST00000444511 CCDC9Q9Y3X0 531 aaKnown RBP30.42■■■□□ 2.46
VSX1-206ENST00000444511 FAM83GA6ND36 823 aa30.41■■■□□ 2.46
VSX1-206ENST00000444511 PLCH1Q4KWH8 1693 aa30.41■■■□□ 2.46
VSX1-206ENST00000444511 ALS2Q96Q42 1657 aa30.41■■■□□ 2.46
VSX1-206ENST00000444511 ITSN1Q15811 1721 aa30.39■■■□□ 2.46
VSX1-206ENST00000444511 NWD2Q9ULI1 1742 aa30.39■■■□□ 2.46
VSX1-206ENST00000444511 CCDC125Q86Z20 511 aa30.35■■■□□ 2.45
VSX1-206ENST00000444511 SEPT12Q8IYM1 358 aa30.35■■■□□ 2.45
VSX1-206ENST00000444511 BTG4Q9NY30 223 aa30.34■■■□□ 2.45
VSX1-206ENST00000444511 CCDC61Q9Y6R9 512 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms