RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 CGNL1Q0VF96 1302 aa29.45■■■□□ 2.3
PREB-206ENST00000444452 NSD2O96028 1365 aa29.43■■■□□ 2.3
PREB-206ENST00000444452 NINLQ9Y2I6 1382 aa29.43■■■□□ 2.3
PREB-206ENST00000444452 PTPRMP28827 1452 aa29.42■■■□□ 2.3
PREB-206ENST00000444452 SLFN5Q08AF3 891 aa29.42■■■□□ 2.3
PREB-206ENST00000444452 FBXO31Q5XUX0 539 aaPredicted RBP29.42■■■□□ 2.3
PREB-206ENST00000444452 CCDC146Q8IYE0 955 aa29.42■■■□□ 2.3
PREB-206ENST00000444452 SHPRHQ149N8 1683 aa29.41■■■□□ 2.3
PREB-206ENST00000444452 TRMT2AQ8IZ69 625 aaKnown RBP29.4■■■□□ 2.3
PREB-206ENST00000444452 APAF1O14727 1248 aa29.4■■■□□ 2.3
PREB-206ENST00000444452 SPATA31D1Q6ZQQ2 1576 aa29.39■■■□□ 2.3
PREB-206ENST00000444452 ANP32EQ9BTT0 268 aa29.38■■■□□ 2.29
PREB-206ENST00000444452 YTHDC2Q9H6S0 1430 aaKnown RBP29.38■■■□□ 2.29
PREB-206ENST00000444452 CLTCQ00610 1675 aaKnown RBP29.37■■■□□ 2.29
PREB-206ENST00000444452 PLIN1O60240 522 aa29.37■■■□□ 2.29
PREB-206ENST00000444452 ALKQ9UM73 1620 aa29.36■■■□□ 2.29
PREB-206ENST00000444452 CABP2Q9NPB3 220 aa29.34■■■□□ 2.29
PREB-206ENST00000444452 ARHGEF40Q8TER5 1519 aa29.34■■■□□ 2.29
PREB-206ENST00000444452 STK26Q9P289 416 aa29.33■■■□□ 2.29
PREB-206ENST00000444452 ATAD2Q6PL18 1390 aa29.33■■■□□ 2.29
PREB-206ENST00000444452 NKTRP30414 1462 aaKnown RBP29.32■■■□□ 2.28
PREB-206ENST00000444452 E9PSI1 815 aa29.32■■■□□ 2.28
PREB-206ENST00000444452 CRBNQ96SW2 442 aa29.31■■■□□ 2.28
PREB-206ENST00000444452 ABCC11Q96J66 1382 aa29.31■■■□□ 2.28
PREB-206ENST00000444452 A2ML1A8K2U0 1454 aa29.31■■■□□ 2.28
PREB-206ENST00000444452 MSH5O43196 834 aa29.3■■■□□ 2.28
PREB-206ENST00000444452 SAFB2Q14151 953 aaKnown RBP eCLIP29.3■■■□□ 2.28
PREB-206ENST00000444452 STAG3Q9UJ98 1225 aa29.3■■■□□ 2.28
PREB-206ENST00000444452 A0A1W2PP64 1363 aa29.29■■■□□ 2.28
PREB-206ENST00000444452 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.28■■■□□ 2.28
PREB-206ENST00000444452 TNNT2P45379 298 aaPredicted RBP29.28■■■□□ 2.28
PREB-206ENST00000444452 CFAP53Q96M91 514 aa29.28■■■□□ 2.28
PREB-206ENST00000444452 PRAM1Q96QH2 718 aa29.28■■■□□ 2.28
PREB-206ENST00000444452 SRPK2P78362 688 aaKnown RBP29.27■■■□□ 2.28
PREB-206ENST00000444452 SPINK5Q9NQ38 1064 aaPredicted RBP29.27■■■□□ 2.28
PREB-206ENST00000444452 IQSEC2Q5JU85 1478 aa29.27■■■□□ 2.28
PREB-206ENST00000444452 MTHFSP49914 203 aa29.27■■■□□ 2.28
PREB-206ENST00000444452 DLC1Q96QB1 1528 aa29.25■■■□□ 2.27
PREB-206ENST00000444452 RUNDC1Q96C34 613 aa29.25■■■□□ 2.27
PREB-206ENST00000444452 KIF13AQ9H1H9 1805 aa29.25■■■□□ 2.27
PREB-206ENST00000444452 POGKQ9P215 609 aa29.25■■■□□ 2.27
PREB-206ENST00000444452 C20orf194Q5TEA3 1177 aa29.23■■■□□ 2.27
PREB-206ENST00000444452 RIMS2Q9UQ26 1411 aa29.23■■■□□ 2.27
PREB-206ENST00000444452 MED14O60244 1454 aa29.23■■■□□ 2.27
PREB-206ENST00000444452 TCERG1O14776 1098 aaKnown RBP29.22■■■□□ 2.27
PREB-206ENST00000444452 WWC1Q8IX03 1113 aa29.22■■■□□ 2.27
PREB-206ENST00000444452 MINK1Q8N4C8 1332 aaPredicted RBP29.22■■■□□ 2.27
PREB-206ENST00000444452 CD163L1Q9NR16 1453 aa29.22■■■□□ 2.27
PREB-206ENST00000444452 TERF2IPQ9NYB0 399 aa29.21■■■□□ 2.27
PREB-206ENST00000444452 SETD1AO15047 1707 aaKnown RBP29.21■■■□□ 2.27
PREB-206ENST00000444452 NCBP3Q53F19 620 aaKnown RBP29.2■■■□□ 2.26
PREB-206ENST00000444452 SENP3Q9H4L4 574 aaPredicted RBP29.2■■■□□ 2.26
PREB-206ENST00000444452 ANKRD26Q9UPS8 1709 aa29.19■■■□□ 2.26
PREB-206ENST00000444452 PHF23Q9BUL5 403 aaPredicted RBP29.19■■■□□ 2.26
PREB-206ENST00000444452 DMRT2Q9Y5R5 561 aa29.18■■■□□ 2.26
PREB-206ENST00000444452 NLRP1Q9C000 1473 aa29.17■■■□□ 2.26
PREB-206ENST00000444452 CCDC27Q2M243 656 aa29.15■■■□□ 2.26
PREB-206ENST00000444452 TCP11L2Q8N4U5 519 aa29.15■■■□□ 2.26
PREB-206ENST00000444452 MS4A1P11836 297 aa29.15■■■□□ 2.26
PREB-206ENST00000444452 MLECQ14165 292 aa29.15■■■□□ 2.26
PREB-206ENST00000444452 CDK19Q9BWU1 502 aa29.13■■■□□ 2.25
PREB-206ENST00000444452 ADGRB2O60241 1585 aa29.12■■■□□ 2.25
PREB-206ENST00000444452 ZMYM3Q14202 1370 aa29.12■■■□□ 2.25
PREB-206ENST00000444452 WDR63Q8IWG1 891 aa29.11■■■□□ 2.25
PREB-206ENST00000444452 NRXN3Q9Y4C0 1643 aa29.11■■■□□ 2.25
PREB-206ENST00000444452 KDM2BQ8NHM5 1336 aa29.11■■■□□ 2.25
PREB-206ENST00000444452 HDGFL2Q7Z4V5 671 aaPredicted RBP29.11■■■□□ 2.25
PREB-206ENST00000444452 FYB1O15117 783 aa29.1■■■□□ 2.25
PREB-206ENST00000444452 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.1■■■□□ 2.25
PREB-206ENST00000444452 COL3A1P02461 1466 aaPredicted RBP29.1■■■□□ 2.25
PREB-206ENST00000444452 GGNBP2Q9H3C7 697 aa29.1■■■□□ 2.25
PREB-206ENST00000444452 ESF1Q9H501 851 aaKnown RBP29.08■■■□□ 2.25
PREB-206ENST00000444452 ATP7BP35670 1465 aa29.07■■■□□ 2.24
PREB-206ENST00000444452 BCAR3O75815 825 aa29.07■■■□□ 2.24
PREB-206ENST00000444452 CENPQQ7L2Z9 268 aaPredicted RBP29.07■■■□□ 2.24
PREB-206ENST00000444452 U2AF1L5P0DN76 240 aaPredicted RBP29.06■■■□□ 2.24
PREB-206ENST00000444452 U2AF1Q01081 240 aaKnown RBP eCLIP29.06■■■□□ 2.24
PREB-206ENST00000444452 RRP7AQ9Y3A4 280 aaKnown RBP29.06■■■□□ 2.24
PREB-206ENST00000444452 NEUROD2Q15784 382 aa29.05■■■□□ 2.24
PREB-206ENST00000444452 KIF20BQ96Q89 1820 aa29.05■■■□□ 2.24
PREB-206ENST00000444452 CABP1Q9NZU7 370 aa29.04■■■□□ 2.24
PREB-206ENST00000444452 ANP32AP39687 249 aaKnown RBP29.03■■■□□ 2.24
PREB-206ENST00000444452 PDE3AQ14432 1141 aa29.03■■■□□ 2.24
PREB-206ENST00000444452 ERICH6Q7L0X2 663 aa29.03■■■□□ 2.24
PREB-206ENST00000444452 WAPLQ7Z5K2 1190 aa29.02■■■□□ 2.24
PREB-206ENST00000444452 KNDC1Q76NI1 1749 aa29.01■■■□□ 2.23
PREB-206ENST00000444452 PDE4AP27815 886 aa29.01■■■□□ 2.23
PREB-206ENST00000444452 PNPLA6Q8IY17 1366 aa29.01■■■□□ 2.23
PREB-206ENST00000444452 TNRQ92752 1358 aa29■■■□□ 2.23
PREB-206ENST00000444452 HDGFP51858 240 aaKnown RBP28.99■■■□□ 2.23
PREB-206ENST00000444452 BACH2Q9BYV9 841 aa28.99■■■□□ 2.23
PREB-206ENST00000444452 TECPR2O15040 1411 aa28.99■■■□□ 2.23
PREB-206ENST00000444452 METP08581 1390 aa28.99■■■□□ 2.23
PREB-206ENST00000444452 FAM135BQ49AJ0 1406 aa28.98■■■□□ 2.23
PREB-206ENST00000444452 SIRT1Q96EB6 747 aa28.98■■■□□ 2.23
PREB-206ENST00000444452 PLEKHF1Q96S99 279 aa28.98■■■□□ 2.23
PREB-206ENST00000444452 MYH16Q9H6N6 1097 aa28.96■■■□□ 2.23
PREB-206ENST00000444452 RARSP54136 660 aaKnown RBP28.95■■■□□ 2.23
PREB-206ENST00000444452 CPS1P31327 1500 aa28.95■■■□□ 2.22
PREB-206ENST00000444452 CPSF1Q10570 1443 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms