RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SLIT2O94813 1529 aa22.92■■□□□ 1.26
SYNCRIP-203ENST00000444272 RGPD1P0DJD0 1748 aa22.91■■□□□ 1.26
SYNCRIP-203ENST00000444272 CAMTA1Q9Y6Y1 1673 aa22.91■■□□□ 1.26
SYNCRIP-203ENST00000444272 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
SYNCRIP-203ENST00000444272 PPP1R1BQ9UD71 204 aaPredicted RBP22.86■■□□□ 1.25
SYNCRIP-203ENST00000444272 CROCC2H7BZ55 1655 aa22.86■■□□□ 1.25
SYNCRIP-203ENST00000444272 NRXN3Q9Y4C0 1643 aa22.85■■□□□ 1.25
SYNCRIP-203ENST00000444272 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
SYNCRIP-203ENST00000444272 NINLQ9Y2I6 1382 aa22.82■■□□□ 1.24
SYNCRIP-203ENST00000444272 ONECUT3O60422 494 aaPredicted RBP22.82■■□□□ 1.24
SYNCRIP-203ENST00000444272 EZH2Q15910 746 aaKnown RBP22.82■■□□□ 1.24
SYNCRIP-203ENST00000444272 PTPN23Q9H3S7 1636 aa22.82■■□□□ 1.24
SYNCRIP-203ENST00000444272 A0A0G2JS52 829 aa22.81■■□□□ 1.24
SYNCRIP-203ENST00000444272 MYT1Q01538 1121 aa22.81■■□□□ 1.24
SYNCRIP-203ENST00000444272 CCDC9Q9Y3X0 531 aaKnown RBP22.81■■□□□ 1.24
SYNCRIP-203ENST00000444272 TNS1Q9HBL0 1735 aaKnown RBP22.81■■□□□ 1.24
SYNCRIP-203ENST00000444272 DISP2A7MBM2 1401 aa22.8■■□□□ 1.24
SYNCRIP-203ENST00000444272 VPS72Q15906 364 aa22.79■■□□□ 1.24
SYNCRIP-203ENST00000444272 PXDNQ92626 1479 aa22.79■■□□□ 1.24
SYNCRIP-203ENST00000444272 METP08581 1390 aa22.78■■□□□ 1.24
SYNCRIP-203ENST00000444272 USP32Q8NFA0 1604 aa22.76■■□□□ 1.23
SYNCRIP-203ENST00000444272 NPHP3Q7Z494 1330 aa22.76■■□□□ 1.23
SYNCRIP-203ENST00000444272 ABCC5O15440 1437 aa22.75■■□□□ 1.23
SYNCRIP-203ENST00000444272 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
SYNCRIP-203ENST00000444272 FAM182BQ5T319 152 aa22.74■■□□□ 1.23
SYNCRIP-203ENST00000444272 PLCH1Q4KWH8 1693 aa22.74■■□□□ 1.23
SYNCRIP-203ENST00000444272 SPON1Q9HCB6 807 aa22.73■■□□□ 1.23
SYNCRIP-203ENST00000444272 NWD2Q9ULI1 1742 aa22.71■■□□□ 1.23
SYNCRIP-203ENST00000444272 ADGRB2O60241 1585 aa22.71■■□□□ 1.23
SYNCRIP-203ENST00000444272 CAMKK2Q96RR4 588 aa22.7■■□□□ 1.22
SYNCRIP-203ENST00000444272 ADGRL2O95490 1459 aa22.7■■□□□ 1.22
SYNCRIP-203ENST00000444272 KCNQ2O43526 872 aa22.68■■□□□ 1.22
SYNCRIP-203ENST00000444272 FAM98CQ17RN3 349 aaKnown RBP22.68■■□□□ 1.22
SYNCRIP-203ENST00000444272 CHD4Q14839 1912 aa22.67■■□□□ 1.22
SYNCRIP-203ENST00000444272 ESCO1Q5FWF5 840 aa22.67■■□□□ 1.22
SYNCRIP-203ENST00000444272 RREB1Q92766 1687 aa22.67■■□□□ 1.22
SYNCRIP-203ENST00000444272 NUP188Q5SRE5 1749 aa22.66■■□□□ 1.22
SYNCRIP-203ENST00000444272 FOXO3O43524 673 aa22.66■■□□□ 1.22
SYNCRIP-203ENST00000444272 DAPK1P53355 1430 aa22.65■■□□□ 1.22
SYNCRIP-203ENST00000444272 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.21
SYNCRIP-203ENST00000444272 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
SYNCRIP-203ENST00000444272 CHIC2Q9UKJ5 165 aa22.63■■□□□ 1.21
SYNCRIP-203ENST00000444272 PARD3Q8TEW0 1356 aa22.62■■□□□ 1.21
SYNCRIP-203ENST00000444272 GIGYF1O75420 1035 aaPredicted RBP22.61■■□□□ 1.21
SYNCRIP-203ENST00000444272 HAP1P54257 671 aaPredicted RBP22.61■■□□□ 1.21
SYNCRIP-203ENST00000444272 NBPF8Q3BBV2 869 aa22.61■■□□□ 1.21
SYNCRIP-203ENST00000444272 NBPF14Q5TI25 921 aa22.61■■□□□ 1.21
SYNCRIP-203ENST00000444272 E9PCH4 1651 aa22.61■■□□□ 1.21
SYNCRIP-203ENST00000444272 TRIM37O94972 964 aa22.59■■□□□ 1.21
SYNCRIP-203ENST00000444272 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
SYNCRIP-203ENST00000444272 APBA3O96018 575 aa22.58■■□□□ 1.21
SYNCRIP-203ENST00000444272 LRPPRCP42704 1394 aaKnown RBP22.58■■□□□ 1.21
SYNCRIP-203ENST00000444272 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
SYNCRIP-203ENST00000444272 NRKQ7Z2Y5 1582 aa22.57■■□□□ 1.2
SYNCRIP-203ENST00000444272 NRAPQ86VF7 1730 aa22.57■■□□□ 1.2
SYNCRIP-203ENST00000444272 PLEKHG5O94827 1062 aa22.56■■□□□ 1.2
SYNCRIP-203ENST00000444272 CABLES1Q8TDN4 633 aa22.55■■□□□ 1.2
SYNCRIP-203ENST00000444272 ABCA3Q99758 1704 aa22.52■■□□□ 1.2
SYNCRIP-203ENST00000444272 CDC42BPGQ6DT37 1551 aa22.52■■□□□ 1.2
SYNCRIP-203ENST00000444272 THSD7AQ9UPZ6 1657 aa22.52■■□□□ 1.2
SYNCRIP-203ENST00000444272 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
SYNCRIP-203ENST00000444272 MYOM1P52179 1685 aa22.51■■□□□ 1.19
SYNCRIP-203ENST00000444272 FAM83GA6ND36 823 aa22.48■■□□□ 1.19
SYNCRIP-203ENST00000444272 NUTM2FA1L443 756 aa22.47■■□□□ 1.19
SYNCRIP-203ENST00000444272 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
SYNCRIP-203ENST00000444272 FAM196AQ6ZSG2 479 aa22.47■■□□□ 1.19
SYNCRIP-203ENST00000444272 HFM1A2PYH4 1435 aa22.47■■□□□ 1.19
SYNCRIP-203ENST00000444272 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
SYNCRIP-203ENST00000444272 CCDC144AA2RUR9 1427 aa22.46■■□□□ 1.19
SYNCRIP-203ENST00000444272 BTG4Q9NY30 223 aa22.45■■□□□ 1.18
SYNCRIP-203ENST00000444272 TNS3Q68CZ2 1445 aa22.44■■□□□ 1.18
SYNCRIP-203ENST00000444272 CASZ1Q86V15 1759 aa22.44■■□□□ 1.18
SYNCRIP-203ENST00000444272 KRT28Q7Z3Y7 464 aa22.43■■□□□ 1.18
SYNCRIP-203ENST00000444272 KIF1AQ12756 1690 aa22.42■■□□□ 1.18
SYNCRIP-203ENST00000444272 NEXMIFQ5QGS0 1516 aa22.42■■□□□ 1.18
SYNCRIP-203ENST00000444272 PRAG1Q86YV5 1406 aa22.42■■□□□ 1.18
SYNCRIP-203ENST00000444272 SPATA31A5Q5VU36 1347 aa22.41■■□□□ 1.18
SYNCRIP-203ENST00000444272 SPATA31A7Q8IWB4 1347 aa22.41■■□□□ 1.18
SYNCRIP-203ENST00000444272 SYT17Q9BSW7 474 aa22.41■■□□□ 1.18
SYNCRIP-203ENST00000444272 GOLGB1Q14789 3259 aaKnown RBP22.4■■□□□ 1.18
SYNCRIP-203ENST00000444272 FHDC1Q9C0D6 1143 aaPredicted RBP22.39■■□□□ 1.17
SYNCRIP-203ENST00000444272 ZBTB7AO95365 584 aa22.37■■□□□ 1.17
SYNCRIP-203ENST00000444272 LMOD2Q6P5Q4 547 aa22.37■■□□□ 1.17
SYNCRIP-203ENST00000444272 NAIPQ13075 1403 aa22.37■■□□□ 1.17
SYNCRIP-203ENST00000444272 COL14A1Q05707 1796 aaKnown RBP22.37■■□□□ 1.17
SYNCRIP-203ENST00000444272 PTGER2P43116 358 aa22.36■■□□□ 1.17
SYNCRIP-203ENST00000444272 PDGFDQ9GZP0 370 aaPredicted RBP22.35■■□□□ 1.17
SYNCRIP-203ENST00000444272 SHANK3Q9BYB0 1731 aa22.34■■□□□ 1.17
SYNCRIP-203ENST00000444272 DLC1Q96QB1 1528 aa22.34■■□□□ 1.17
SYNCRIP-203ENST00000444272 ATF5Q9Y2D1 282 aaPredicted RBP22.32■■□□□ 1.16
SYNCRIP-203ENST00000444272 PSME1Q06323 249 aa22.31■■□□□ 1.16
SYNCRIP-203ENST00000444272 ANO8Q9HCE9 1232 aaPredicted RBP22.31■■□□□ 1.16
SYNCRIP-203ENST00000444272 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
SYNCRIP-203ENST00000444272 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
SYNCRIP-203ENST00000444272 CAPN15O75808 1086 aa22.3■■□□□ 1.16
SYNCRIP-203ENST00000444272 RRBP1Q9P2E9 1410 aaKnown RBP22.3■■□□□ 1.16
SYNCRIP-203ENST00000444272 SBNO1A3KN83 1393 aa22.27■■□□□ 1.16
SYNCRIP-203ENST00000444272 SPATA31A1Q5TZJ5 1347 aa22.27■■□□□ 1.16
SYNCRIP-203ENST00000444272 RGPD8O14715 1765 aaPredicted RBP22.26■■□□□ 1.15
SYNCRIP-203ENST00000444272 HSPA6P17066 643 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms