RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 HFM1A2PYH4 1435 aa22.51■■□□□ 1.19
MRPL40-202ENST00000443660 FOXO3O43524 673 aa22.5■■□□□ 1.19
MRPL40-202ENST00000443660 CLTCL1P53675 1640 aa22.49■■□□□ 1.19
MRPL40-202ENST00000443660 LRPPRCP42704 1394 aaKnown RBP22.49■■□□□ 1.19
MRPL40-202ENST00000443660 BCL9LQ86UU0 1499 aa22.47■■□□□ 1.19
MRPL40-202ENST00000443660 XPCQ01831 940 aaPredicted RBP22.47■■□□□ 1.19
MRPL40-202ENST00000443660 PPARGC1BQ86YN6 1023 aaKnown RBP22.47■■□□□ 1.19
MRPL40-202ENST00000443660 PRAG1Q86YV5 1406 aa22.46■■□□□ 1.19
MRPL40-202ENST00000443660 MYOM2P54296 1465 aa22.46■■□□□ 1.19
MRPL40-202ENST00000443660 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
MRPL40-202ENST00000443660 COL22A1Q8NFW1 1626 aaPredicted RBP22.44■■□□□ 1.18
MRPL40-202ENST00000443660 KIF1BO60333 1816 aa22.43■■□□□ 1.18
MRPL40-202ENST00000443660 NUTM2FA1L443 756 aa22.42■■□□□ 1.18
MRPL40-202ENST00000443660 SF3B2Q13435 895 aaKnown RBP22.42■■□□□ 1.18
MRPL40-202ENST00000443660 SLC4A1APQ9BWU0 796 aaKnown RBP22.41■■□□□ 1.18
MRPL40-202ENST00000443660 STK26Q9P289 416 aa22.41■■□□□ 1.18
MRPL40-202ENST00000443660 PXDNQ92626 1479 aa22.4■■□□□ 1.18
MRPL40-202ENST00000443660 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.17
MRPL40-202ENST00000443660 BLMP54132 1417 aaPredicted RBP22.39■■□□□ 1.17
MRPL40-202ENST00000443660 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
MRPL40-202ENST00000443660 NAIPQ13075 1403 aa22.37■■□□□ 1.17
MRPL40-202ENST00000443660 CDC42BPGQ6DT37 1551 aa22.36■■□□□ 1.17
MRPL40-202ENST00000443660 SPATA31A3Q5VYP0 1347 aa22.35■■□□□ 1.17
MRPL40-202ENST00000443660 KRT28Q7Z3Y7 464 aa22.35■■□□□ 1.17
MRPL40-202ENST00000443660 DEFB132Q7Z7B7 95 aa22.35■■□□□ 1.17
MRPL40-202ENST00000443660 RALGAPBQ86X10 1494 aa22.34■■□□□ 1.17
MRPL40-202ENST00000443660 SEPT12Q8IYM1 358 aa22.34■■□□□ 1.17
MRPL40-202ENST00000443660 EP400Q96L91 3159 aa22.33■■□□□ 1.17
MRPL40-202ENST00000443660 CCDC9Q9Y3X0 531 aaKnown RBP22.33■■□□□ 1.17
MRPL40-202ENST00000443660 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
MRPL40-202ENST00000443660 PSME1Q06323 249 aa22.32■■□□□ 1.16
MRPL40-202ENST00000443660 RGL3Q3MIN7 710 aa22.32■■□□□ 1.16
MRPL40-202ENST00000443660 SLIT2O94813 1529 aa22.31■■□□□ 1.16
MRPL40-202ENST00000443660 ABCC11Q96J66 1382 aa22.3■■□□□ 1.16
MRPL40-202ENST00000443660 VPS72Q15906 364 aa22.3■■□□□ 1.16
MRPL40-202ENST00000443660 TMEM132EQ6IEE7 984 aa22.3■■□□□ 1.16
MRPL40-202ENST00000443660 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
MRPL40-202ENST00000443660 MARF1Q9Y4F3 1742 aaKnown RBP22.28■■□□□ 1.16
MRPL40-202ENST00000443660 PLEKHG5O94827 1062 aa22.28■■□□□ 1.16
MRPL40-202ENST00000443660 KRT27Q7Z3Y8 459 aa22.28■■□□□ 1.16
MRPL40-202ENST00000443660 TECPR2O15040 1411 aa22.28■■□□□ 1.16
MRPL40-202ENST00000443660 ONECUT3O60422 494 aaPredicted RBP22.27■■□□□ 1.16
MRPL40-202ENST00000443660 GLI3P10071 1580 aa22.27■■□□□ 1.16
MRPL40-202ENST00000443660 LMOD2Q6P5Q4 547 aa22.27■■□□□ 1.16
MRPL40-202ENST00000443660 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.16
MRPL40-202ENST00000443660 ANKRD30BQ9BXX2 1392 aa22.26■■□□□ 1.15
MRPL40-202ENST00000443660 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
MRPL40-202ENST00000443660 PHF8Q9UPP1 1060 aa22.26■■□□□ 1.15
MRPL40-202ENST00000443660 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.26■■□□□ 1.15
MRPL40-202ENST00000443660 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
MRPL40-202ENST00000443660 PPLO60437 1756 aa22.25■■□□□ 1.15
MRPL40-202ENST00000443660 A0A0G2JS52 829 aa22.25■■□□□ 1.15
MRPL40-202ENST00000443660 MYT1Q01538 1121 aa22.25■■□□□ 1.15
MRPL40-202ENST00000443660 SIRT1Q96EB6 747 aa22.25■■□□□ 1.15
MRPL40-202ENST00000443660 BAG6P46379 1132 aa22.23■■□□□ 1.15
MRPL40-202ENST00000443660 TNS3Q68CZ2 1445 aa22.21■■□□□ 1.15
MRPL40-202ENST00000443660 USP32Q8NFA0 1604 aa22.2■■□□□ 1.14
MRPL40-202ENST00000443660 PSDA5PKW4 1024 aaPredicted RBP22.19■■□□□ 1.14
MRPL40-202ENST00000443660 FAM83GA6ND36 823 aa22.19■■□□□ 1.14
MRPL40-202ENST00000443660 SBNO1A3KN83 1393 aa22.19■■□□□ 1.14
MRPL40-202ENST00000443660 ARHGEF10O15013 1369 aa22.19■■□□□ 1.14
MRPL40-202ENST00000443660 YTHDC2Q9H6S0 1430 aaKnown RBP22.19■■□□□ 1.14
MRPL40-202ENST00000443660 KIF1AQ12756 1690 aa22.19■■□□□ 1.14
MRPL40-202ENST00000443660 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
MRPL40-202ENST00000443660 HRCP23327 699 aa22.16■■□□□ 1.14
MRPL40-202ENST00000443660 FAM98CQ17RN3 349 aaKnown RBP22.16■■□□□ 1.14
MRPL40-202ENST00000443660 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
MRPL40-202ENST00000443660 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
MRPL40-202ENST00000443660 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
MRPL40-202ENST00000443660 PIK3C2GO75747 1445 aa22.14■■□□□ 1.14
MRPL40-202ENST00000443660 SAFB2Q14151 953 aaKnown RBP eCLIP22.14■■□□□ 1.13
MRPL40-202ENST00000443660 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
MRPL40-202ENST00000443660 BTG4Q9NY30 223 aa22.14■■□□□ 1.13
MRPL40-202ENST00000443660 BRWD3Q6RI45 1802 aa22.13■■□□□ 1.13
MRPL40-202ENST00000443660 PMFBP1Q8TBY8 1022 aa22.13■■□□□ 1.13
MRPL40-202ENST00000443660 POGKQ9P215 609 aa22.13■■□□□ 1.13
MRPL40-202ENST00000443660 PRAM1Q96QH2 718 aa22.12■■□□□ 1.13
MRPL40-202ENST00000443660 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
MRPL40-202ENST00000443660 CFAP70Q5T0N1 1121 aa22.11■■□□□ 1.13
MRPL40-202ENST00000443660 NRXN1Q9ULB1 1477 aa22.1■■□□□ 1.13
MRPL40-202ENST00000443660 LRP5O75197 1615 aa22.1■■□□□ 1.13
MRPL40-202ENST00000443660 KNDC1Q76NI1 1749 aa22.1■■□□□ 1.13
MRPL40-202ENST00000443660 NWD2Q9ULI1 1742 aa22.09■■□□□ 1.13
MRPL40-202ENST00000443660 R3HDM1Q15032 1099 aaKnown RBP22.07■■□□□ 1.12
MRPL40-202ENST00000443660 GPRASP1Q5JY77 1395 aa22.07■■□□□ 1.12
MRPL40-202ENST00000443660 PLCH1Q4KWH8 1693 aa22.07■■□□□ 1.12
MRPL40-202ENST00000443660 FAM182BQ5T319 152 aa22.06■■□□□ 1.12
MRPL40-202ENST00000443660 ANKARQ7Z5J8 1434 aa22.05■■□□□ 1.12
MRPL40-202ENST00000443660 SPATA31A5Q5VU36 1347 aa22.04■■□□□ 1.12
MRPL40-202ENST00000443660 SPATA31A7Q8IWB4 1347 aa22.04■■□□□ 1.12
MRPL40-202ENST00000443660 IFT172Q9UG01 1749 aa22.02■■□□□ 1.12
MRPL40-202ENST00000443660 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
MRPL40-202ENST00000443660 RGPD8O14715 1765 aaPredicted RBP22.01■■□□□ 1.11
MRPL40-202ENST00000443660 EZH2Q15910 746 aaKnown RBP22■■□□□ 1.11
MRPL40-202ENST00000443660 NGDNQ8NEJ9 315 aaKnown RBP22■■□□□ 1.11
MRPL40-202ENST00000443660 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
MRPL40-202ENST00000443660 PRDM11Q9NQV5 511 aa22■■□□□ 1.11
MRPL40-202ENST00000443660 ACIN1Q9UKV3 1341 aaKnown RBP22■■□□□ 1.11
MRPL40-202ENST00000443660 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
MRPL40-202ENST00000443660 FAM196AQ6ZSG2 479 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms