RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 DDX17Q92841 729 aaKnown RBP12.8□□□□□ -0.36
USP6NL-203ENST00000443016 LRRC59Q96AG4 307 aaKnown RBP12.8□□□□□ -0.36
USP6NL-203ENST00000443016 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
USP6NL-203ENST00000443016 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
USP6NL-203ENST00000443016 PIK3C2GO75747 1445 aa12.8□□□□□ -0.36
USP6NL-203ENST00000443016 C1orf167Q5SNV9 1468 aa12.79□□□□□ -0.36
USP6NL-203ENST00000443016 ORAI2Q96SN7 254 aa12.79□□□□□ -0.36
USP6NL-203ENST00000443016 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
USP6NL-203ENST00000443016 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
USP6NL-203ENST00000443016 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
USP6NL-203ENST00000443016 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
USP6NL-203ENST00000443016 ESCO1Q5FWF5 840 aa12.78□□□□□ -0.36
USP6NL-203ENST00000443016 C14orf93Q9H972 538 aaKnown RBP12.78□□□□□ -0.36
USP6NL-203ENST00000443016 NUTM2FA1L443 756 aa12.77□□□□□ -0.37
USP6NL-203ENST00000443016 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
USP6NL-203ENST00000443016 ABCC11Q96J66 1382 aa12.77□□□□□ -0.37
USP6NL-203ENST00000443016 DCAF11Q8TEB1 546 aa12.77□□□□□ -0.37
USP6NL-203ENST00000443016 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
USP6NL-203ENST00000443016 IFT172Q9UG01 1749 aa12.76□□□□□ -0.37
USP6NL-203ENST00000443016 YTHDC2Q9H6S0 1430 aaKnown RBP12.76□□□□□ -0.37
USP6NL-203ENST00000443016 TECPR2O15040 1411 aa12.75□□□□□ -0.37
USP6NL-203ENST00000443016 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP6NL-203ENST00000443016 MYOM2P54296 1465 aa12.74□□□□□ -0.37
USP6NL-203ENST00000443016 LRP6O75581 1613 aa12.74□□□□□ -0.37
USP6NL-203ENST00000443016 PLEKHH1Q9ULM0 1364 aa12.74□□□□□ -0.37
USP6NL-203ENST00000443016 ZNF772Q68DY9 489 aaPredicted RBP12.74□□□□□ -0.37
USP6NL-203ENST00000443016 POGKQ9P215 609 aa12.73□□□□□ -0.37
USP6NL-203ENST00000443016 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
USP6NL-203ENST00000443016 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
USP6NL-203ENST00000443016 FOXO3O43524 673 aa12.73□□□□□ -0.37
USP6NL-203ENST00000443016 NHSL1Q5SYE7 1610 aa12.73□□□□□ -0.37
USP6NL-203ENST00000443016 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
USP6NL-203ENST00000443016 NRXN1Q9ULB1 1477 aa12.72□□□□□ -0.37
USP6NL-203ENST00000443016 CDC42BPGQ6DT37 1551 aa12.72□□□□□ -0.37
USP6NL-203ENST00000443016 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
USP6NL-203ENST00000443016 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
USP6NL-203ENST00000443016 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
USP6NL-203ENST00000443016 STAC3Q96MF2 364 aa12.71□□□□□ -0.37
USP6NL-203ENST00000443016 C8orf37Q96NL8 207 aa12.71□□□□□ -0.37
USP6NL-203ENST00000443016 PNPLA6Q8IY17 1366 aa12.71□□□□□ -0.37
USP6NL-203ENST00000443016 ADAMTS2O95450 1211 aa12.71□□□□□ -0.37
USP6NL-203ENST00000443016 XPCQ01831 940 aaPredicted RBP12.71□□□□□ -0.37
USP6NL-203ENST00000443016 TRAK1Q9UPV9 953 aa12.71□□□□□ -0.37
USP6NL-203ENST00000443016 LAMC1P11047 1609 aa12.7□□□□□ -0.38
USP6NL-203ENST00000443016 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
USP6NL-203ENST00000443016 AFF2P51816 1311 aa12.69□□□□□ -0.38
USP6NL-203ENST00000443016 NGLY1Q96IV0 654 aa12.69□□□□□ -0.38
USP6NL-203ENST00000443016 KNDC1Q76NI1 1749 aa12.69□□□□□ -0.38
USP6NL-203ENST00000443016 RXRBP28702 533 aa12.67□□□□□ -0.38
USP6NL-203ENST00000443016 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
USP6NL-203ENST00000443016 PHF8Q9UPP1 1060 aa12.66□□□□□ -0.38
USP6NL-203ENST00000443016 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
USP6NL-203ENST00000443016 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
USP6NL-203ENST00000443016 QTRT2Q9H974 415 aaKnown RBP12.64□□□□□ -0.39
USP6NL-203ENST00000443016 ADGRB1O14514 1584 aa12.64□□□□□ -0.39
USP6NL-203ENST00000443016 PSME1Q06323 249 aa12.64□□□□□ -0.39
USP6NL-203ENST00000443016 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
USP6NL-203ENST00000443016 PXDNQ92626 1479 aa12.63□□□□□ -0.39
USP6NL-203ENST00000443016 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
USP6NL-203ENST00000443016 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
USP6NL-203ENST00000443016 PMFBP1Q8TBY8 1022 aa12.63□□□□□ -0.39
USP6NL-203ENST00000443016 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
USP6NL-203ENST00000443016 USP21Q9UK80 565 aa12.63□□□□□ -0.39
USP6NL-203ENST00000443016 FMN2Q9NZ56 1722 aa12.63□□□□□ -0.39
USP6NL-203ENST00000443016 EIF3AQ14152 1382 aaKnown RBP12.61□□□□□ -0.39
USP6NL-203ENST00000443016 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
USP6NL-203ENST00000443016 WASLO00401 505 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-203ENST00000443016 RBM6P78332 1123 aaKnown RBP12.61□□□□□ -0.39
USP6NL-203ENST00000443016 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
USP6NL-203ENST00000443016 KIF1AQ12756 1690 aa12.6□□□□□ -0.39
USP6NL-203ENST00000443016 ANKARQ7Z5J8 1434 aa12.59□□□□□ -0.39
USP6NL-203ENST00000443016 TRPC5Q9UL62 973 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-203ENST00000443016 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
USP6NL-203ENST00000443016 NBPF1Q3BBV0 1214 aa12.58□□□□□ -0.4
USP6NL-203ENST00000443016 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
USP6NL-203ENST00000443016 SIN3AQ96ST3 1273 aa12.58□□□□□ -0.4
USP6NL-203ENST00000443016 GPRASP1Q5JY77 1395 aa12.58□□□□□ -0.4
USP6NL-203ENST00000443016 RGPD8O14715 1765 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-203ENST00000443016 COL22A1Q8NFW1 1626 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-203ENST00000443016 CABLES1Q8TDN4 633 aa12.57□□□□□ -0.4
USP6NL-203ENST00000443016 L3MBTL2Q969R5 705 aa12.57□□□□□ -0.4
USP6NL-203ENST00000443016 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
USP6NL-203ENST00000443016 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
USP6NL-203ENST00000443016 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
USP6NL-203ENST00000443016 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
USP6NL-203ENST00000443016 PRR36Q9H6K5 1346 aa12.56□□□□□ -0.4
USP6NL-203ENST00000443016 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
USP6NL-203ENST00000443016 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
USP6NL-203ENST00000443016 NUDT16Q96DE0 195 aaKnown RBP12.55□□□□□ -0.4
USP6NL-203ENST00000443016 CDK19Q9BWU1 502 aa12.55□□□□□ -0.4
USP6NL-203ENST00000443016 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
USP6NL-203ENST00000443016 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP6NL-203ENST00000443016 USP32Q8NFA0 1604 aa12.53□□□□□ -0.4
USP6NL-203ENST00000443016 EP400Q96L91 3159 aa12.53□□□□□ -0.4
USP6NL-203ENST00000443016 RGS12O14924 1447 aa12.53□□□□□ -0.4
USP6NL-203ENST00000443016 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
USP6NL-203ENST00000443016 CENPJQ9HC77 1338 aaPredicted RBP12.53□□□□□ -0.4
USP6NL-203ENST00000443016 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.4
USP6NL-203ENST00000443016 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.4
USP6NL-203ENST00000443016 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms