RNA–Protein interactions for RNA: ENST00000442729.6

HACD3-202, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2 BASIC

Gene HACD3, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-202ENST00000442729 LAMC1P11047 1609 aa22.5■■□□□ 1.19
HACD3-202ENST00000442729 HRCP23327 699 aa22.5■■□□□ 1.19
HACD3-202ENST00000442729 DDX17Q92841 729 aaKnown RBP22.5■■□□□ 1.19
HACD3-202ENST00000442729 YTHDC2Q9H6S0 1430 aaKnown RBP22.49■■□□□ 1.19
HACD3-202ENST00000442729 ZNF772Q68DY9 489 aaPredicted RBP22.48■■□□□ 1.19
HACD3-202ENST00000442729 WAPLQ7Z5K2 1190 aa22.48■■□□□ 1.19
HACD3-202ENST00000442729 ORAI2Q96SN7 254 aa22.48■■□□□ 1.19
HACD3-202ENST00000442729 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
HACD3-202ENST00000442729 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
HACD3-202ENST00000442729 NRXN1Q9ULB1 1477 aa22.47■■□□□ 1.19
HACD3-202ENST00000442729 PNPLA6Q8IY17 1366 aa22.45■■□□□ 1.18
HACD3-202ENST00000442729 ESCO1Q5FWF5 840 aa22.45■■□□□ 1.18
HACD3-202ENST00000442729 CFAP70Q5T0N1 1121 aa22.44■■□□□ 1.18
HACD3-202ENST00000442729 NPHP3Q7Z494 1330 aa22.43■■□□□ 1.18
HACD3-202ENST00000442729 PLEKHH1Q9ULM0 1364 aa22.42■■□□□ 1.18
HACD3-202ENST00000442729 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
HACD3-202ENST00000442729 SOS2Q07890 1332 aaPredicted RBP22.42■■□□□ 1.18
HACD3-202ENST00000442729 NUTM2FA1L443 756 aa22.4■■□□□ 1.18
HACD3-202ENST00000442729 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.18
HACD3-202ENST00000442729 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.18
HACD3-202ENST00000442729 STAC3Q96MF2 364 aa22.38■■□□□ 1.17
HACD3-202ENST00000442729 C8orf37Q96NL8 207 aa22.38■■□□□ 1.17
HACD3-202ENST00000442729 AFF2P51816 1311 aa22.38■■□□□ 1.17
HACD3-202ENST00000442729 POGKQ9P215 609 aa22.37■■□□□ 1.17
HACD3-202ENST00000442729 FMN2Q9NZ56 1722 aa22.37■■□□□ 1.17
HACD3-202ENST00000442729 FOXO3O43524 673 aa22.35■■□□□ 1.17
HACD3-202ENST00000442729 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
HACD3-202ENST00000442729 ADAMTS2O95450 1211 aa22.34■■□□□ 1.17
HACD3-202ENST00000442729 RXRBP28702 533 aa22.34■■□□□ 1.17
HACD3-202ENST00000442729 SAFB2Q14151 953 aaKnown RBP eCLIP22.34■■□□□ 1.17
HACD3-202ENST00000442729 DLC1Q96QB1 1528 aa22.34■■□□□ 1.17
HACD3-202ENST00000442729 KIF1AQ12756 1690 aa22.33■■□□□ 1.17
HACD3-202ENST00000442729 PXDNQ92626 1479 aa22.33■■□□□ 1.16
HACD3-202ENST00000442729 NGLY1Q96IV0 654 aa22.32■■□□□ 1.16
HACD3-202ENST00000442729 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
HACD3-202ENST00000442729 ADGRB1O14514 1584 aa22.31■■□□□ 1.16
HACD3-202ENST00000442729 TRAK1Q9UPV9 953 aa22.31■■□□□ 1.16
HACD3-202ENST00000442729 COL22A1Q8NFW1 1626 aaPredicted RBP22.3■■□□□ 1.16
HACD3-202ENST00000442729 PHF8Q9UPP1 1060 aa22.28■■□□□ 1.16
HACD3-202ENST00000442729 QTRT2Q9H974 415 aaKnown RBP22.27■■□□□ 1.16
HACD3-202ENST00000442729 PSME1Q06323 249 aa22.26■■□□□ 1.15
HACD3-202ENST00000442729 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
HACD3-202ENST00000442729 CDK12Q9NYV4 1490 aaPredicted RBP22.25■■□□□ 1.15
HACD3-202ENST00000442729 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
HACD3-202ENST00000442729 KRT28Q7Z3Y7 464 aa22.25■■□□□ 1.15
HACD3-202ENST00000442729 ANKARQ7Z5J8 1434 aa22.24■■□□□ 1.15
HACD3-202ENST00000442729 RBM6P78332 1123 aaKnown RBP22.24■■□□□ 1.15
HACD3-202ENST00000442729 USP21Q9UK80 565 aa22.24■■□□□ 1.15
HACD3-202ENST00000442729 RGPD8O14715 1765 aaPredicted RBP22.24■■□□□ 1.15
HACD3-202ENST00000442729 MINK1Q8N4C8 1332 aaPredicted RBP22.23■■□□□ 1.15
HACD3-202ENST00000442729 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
HACD3-202ENST00000442729 SPATA31A3Q5VYP0 1347 aa22.22■■□□□ 1.15
HACD3-202ENST00000442729 HAP1P54257 671 aaPredicted RBP22.2■■□□□ 1.14
HACD3-202ENST00000442729 TRPC5Q9UL62 973 aaPredicted RBP22.2■■□□□ 1.14
HACD3-202ENST00000442729 TNS3Q68CZ2 1445 aa22.2■■□□□ 1.14
HACD3-202ENST00000442729 MARF1Q9Y4F3 1742 aaKnown RBP22.18■■□□□ 1.14
HACD3-202ENST00000442729 FNBP4Q8N3X1 1017 aaPredicted RBP22.18■■□□□ 1.14
HACD3-202ENST00000442729 PMFBP1Q8TBY8 1022 aa22.18■■□□□ 1.14
HACD3-202ENST00000442729 TULP4Q9NRJ4 1543 aa22.17■■□□□ 1.14
HACD3-202ENST00000442729 WASLO00401 505 aaPredicted RBP22.17■■□□□ 1.14
HACD3-202ENST00000442729 LMOD2Q6P5Q4 547 aa22.17■■□□□ 1.14
HACD3-202ENST00000442729 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
HACD3-202ENST00000442729 SBNO1A3KN83 1393 aa22.16■■□□□ 1.14
HACD3-202ENST00000442729 KIAA1210Q9ULL0 1709 aa22.16■■□□□ 1.14
HACD3-202ENST00000442729 USP32Q8NFA0 1604 aa22.16■■□□□ 1.14
HACD3-202ENST00000442729 ARHGEF10O15013 1369 aa22.16■■□□□ 1.14
HACD3-202ENST00000442729 RGS12O14924 1447 aa22.15■■□□□ 1.14
HACD3-202ENST00000442729 GPRASP1Q5JY77 1395 aa22.15■■□□□ 1.14
HACD3-202ENST00000442729 PLEKHG5O94827 1062 aa22.12■■□□□ 1.13
HACD3-202ENST00000442729 UPF1Q92900 1129 aaKnown RBP eCLIP22.12■■□□□ 1.131e-6■□□□□ 8.2
HACD3-202ENST00000442729 ATRNO75882 1429 aa22.12■■□□□ 1.13
HACD3-202ENST00000442729 NGDNQ8NEJ9 315 aaKnown RBP22.11■■□□□ 1.13
HACD3-202ENST00000442729 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
HACD3-202ENST00000442729 ITSN1Q15811 1721 aa22.1■■□□□ 1.13
HACD3-202ENST00000442729 BCL9LQ86UU0 1499 aa22.09■■□□□ 1.13
HACD3-202ENST00000442729 CABLES1Q8TDN4 633 aa22.07■■□□□ 1.12
HACD3-202ENST00000442729 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
HACD3-202ENST00000442729 NBPF1Q3BBV0 1214 aa22.06■■□□□ 1.12
HACD3-202ENST00000442729 UNC5CLQ8IV45 518 aa22.06■■□□□ 1.12
HACD3-202ENST00000442729 NUDT16Q96DE0 195 aaKnown RBP22.06■■□□□ 1.12
HACD3-202ENST00000442729 CDK19Q9BWU1 502 aa22.06■■□□□ 1.12
HACD3-202ENST00000442729 SLIT2O94813 1529 aa22.05■■□□□ 1.12
HACD3-202ENST00000442729 ATP7BP35670 1465 aa22.05■■□□□ 1.12
HACD3-202ENST00000442729 TRPM3Q9HCF6 1732 aaPredicted RBP22.05■■□□□ 1.12
HACD3-202ENST00000442729 ATAD2Q6PL18 1390 aa22.05■■□□□ 1.12
HACD3-202ENST00000442729 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
HACD3-202ENST00000442729 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
HACD3-202ENST00000442729 L3MBTL2Q969R5 705 aa22.05■■□□□ 1.12
HACD3-202ENST00000442729 GJD4Q96KN9 370 aaPredicted RBP22.05■■□□□ 1.12
HACD3-202ENST00000442729 ABCA3Q99758 1704 aa22.04■■□□□ 1.12
HACD3-202ENST00000442729 CENPJQ9HC77 1338 aaPredicted RBP22.03■■□□□ 1.12
HACD3-202ENST00000442729 SIN3AQ96ST3 1273 aa22.03■■□□□ 1.12
HACD3-202ENST00000442729 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
HACD3-202ENST00000442729 PLCH1Q4KWH8 1693 aa22■■□□□ 1.11
HACD3-202ENST00000442729 CCDC9Q9Y3X0 531 aaKnown RBP22■■□□□ 1.11
HACD3-202ENST00000442729 CCDC61Q9Y6R9 512 aa22■■□□□ 1.11
HACD3-202ENST00000442729 NWD2Q9ULI1 1742 aa21.99■■□□□ 1.11
HACD3-202ENST00000442729 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
HACD3-202ENST00000442729 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
HACD3-202ENST00000442729 TOPAZ1Q8N9V7 1692 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms