RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 QTRT2Q9H974 415 aaKnown RBP12.55□□□□□ -0.4
TOP3B-209ENST00000442653 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
TOP3B-209ENST00000442653 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 NGLY1Q96IV0 654 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
TOP3B-209ENST00000442653 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
TOP3B-209ENST00000442653 CCDC144AA2RUR9 1427 aa12.53□□□□□ -0.4
TOP3B-209ENST00000442653 COL22A1Q8NFW1 1626 aaPredicted RBP12.52□□□□□ -0.4
TOP3B-209ENST00000442653 RGL3Q3MIN7 710 aa12.52□□□□□ -0.41
TOP3B-209ENST00000442653 TECPR2O15040 1411 aa12.52□□□□□ -0.41
TOP3B-209ENST00000442653 PXDNQ92626 1479 aa12.52□□□□□ -0.41
TOP3B-209ENST00000442653 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
TOP3B-209ENST00000442653 STK26Q9P289 416 aa12.51□□□□□ -0.41
TOP3B-209ENST00000442653 MYOM2P54296 1465 aa12.51□□□□□ -0.41
TOP3B-209ENST00000442653 XPCQ01831 940 aaPredicted RBP12.5□□□□□ -0.41
TOP3B-209ENST00000442653 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 WAPLQ7Z5K2 1190 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 MPHOSPH9Q99550 1183 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 USP21Q9UK80 565 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 LRPPRCP42704 1394 aaKnown RBP12.5□□□□□ -0.41
TOP3B-209ENST00000442653 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 PIK3C2GO75747 1445 aa12.5□□□□□ -0.41
TOP3B-209ENST00000442653 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 NPHP3Q7Z494 1330 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 FOXO3O43524 673 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
TOP3B-209ENST00000442653 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
TOP3B-209ENST00000442653 ABCC11Q96J66 1382 aa12.48□□□□□ -0.41
TOP3B-209ENST00000442653 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
TOP3B-209ENST00000442653 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
TOP3B-209ENST00000442653 ATRNO75882 1429 aa12.47□□□□□ -0.41
TOP3B-209ENST00000442653 TRPC5Q9UL62 973 aaPredicted RBP12.47□□□□□ -0.41
TOP3B-209ENST00000442653 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.41
TOP3B-209ENST00000442653 YTHDC2Q9H6S0 1430 aaKnown RBP12.46□□□□□ -0.41
TOP3B-209ENST00000442653 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
TOP3B-209ENST00000442653 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
TOP3B-209ENST00000442653 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
TOP3B-209ENST00000442653 NRXN1Q9ULB1 1477 aa12.44□□□□□ -0.42
TOP3B-209ENST00000442653 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
TOP3B-209ENST00000442653 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
TOP3B-209ENST00000442653 C14orf93Q9H972 538 aaKnown RBP12.42□□□□□ -0.42
TOP3B-209ENST00000442653 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
TOP3B-209ENST00000442653 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
TOP3B-209ENST00000442653 SIRT1Q96EB6 747 aa12.4□□□□□ -0.42
TOP3B-209ENST00000442653 GJD4Q96KN9 370 aaPredicted RBP12.4□□□□□ -0.42
TOP3B-209ENST00000442653 SLIT2O94813 1529 aa12.4□□□□□ -0.42
TOP3B-209ENST00000442653 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
TOP3B-209ENST00000442653 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.43
TOP3B-209ENST00000442653 GLI3P10071 1580 aa12.39□□□□□ -0.43
TOP3B-209ENST00000442653 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
TOP3B-209ENST00000442653 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
TOP3B-209ENST00000442653 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 RALGAPBQ86X10 1494 aa12.38□□□□□ -0.43
TOP3B-209ENST00000442653 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 CABLES1Q8TDN4 633 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 DHX57Q6P158 1386 aaKnown RBP12.37□□□□□ -0.43
TOP3B-209ENST00000442653 RAB3GAP2Q9H2M9 1393 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 ADGRB1O14514 1584 aa12.37□□□□□ -0.43
TOP3B-209ENST00000442653 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
TOP3B-209ENST00000442653 DLC1Q96QB1 1528 aa12.36□□□□□ -0.43
TOP3B-209ENST00000442653 SBNO1A3KN83 1393 aa12.35□□□□□ -0.43
TOP3B-209ENST00000442653 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
TOP3B-209ENST00000442653 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
TOP3B-209ENST00000442653 PLCH1Q4KWH8 1693 aa12.34□□□□□ -0.43
TOP3B-209ENST00000442653 ACIN1Q9UKV3 1341 aaKnown RBP12.34□□□□□ -0.43
TOP3B-209ENST00000442653 BRWD3Q6RI45 1802 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 KCNA4P22459 653 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 PSME1Q06323 249 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 PMFBP1Q8TBY8 1022 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 POGKQ9P215 609 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
TOP3B-209ENST00000442653 ARHGEF10O15013 1369 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-209ENST00000442653 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 CCDC125Q86Z20 511 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-209ENST00000442653 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
TOP3B-209ENST00000442653 TRPM3Q9HCF6 1732 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-209ENST00000442653 NWD2Q9ULI1 1742 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 VPS72Q15906 364 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 SEPT12Q8IYM1 358 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 ZRANB1Q9UGI0 708 aa12.31□□□□□ -0.44
TOP3B-209ENST00000442653 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-209ENST00000442653 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
TOP3B-209ENST00000442653 MINK1Q8N4C8 1332 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-209ENST00000442653 ALS2Q96Q42 1657 aa12.29□□□□□ -0.44
TOP3B-209ENST00000442653 TULP4Q9NRJ4 1543 aa12.29□□□□□ -0.44
TOP3B-209ENST00000442653 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
TOP3B-209ENST00000442653 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
TOP3B-209ENST00000442653 NRAPQ86VF7 1730 aa12.28□□□□□ -0.44
TOP3B-209ENST00000442653 DEFB132Q7Z7B7 95 aa12.28□□□□□ -0.44
TOP3B-209ENST00000442653 DCAF11Q8TEB1 546 aa12.28□□□□□ -0.44
TOP3B-209ENST00000442653 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
TOP3B-209ENST00000442653 WASLO00401 505 aaPredicted RBP12.27□□□□□ -0.45
TOP3B-209ENST00000442653 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
TOP3B-209ENST00000442653 KRT27Q7Z3Y8 459 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms