RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 RNF123Q5XPI4 1314 aa19.01■□□□□ 0.63
SCAP-207ENST00000441517 ANO8Q9HCE9 1232 aaPredicted RBP19.01■□□□□ 0.63
SCAP-207ENST00000441517 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
SCAP-207ENST00000441517 PLA2R1Q13018 1463 aa19■□□□□ 0.63
SCAP-207ENST00000441517 CDK19Q9BWU1 502 aa19■□□□□ 0.63
SCAP-207ENST00000441517 NUP160Q12769 1436 aa19■□□□□ 0.63
SCAP-207ENST00000441517 RBM33Q96EV2 1170 aaKnown RBP19■□□□□ 0.63
SCAP-207ENST00000441517 MIS18AQ9NYP9 233 aa19■□□□□ 0.63
SCAP-207ENST00000441517 SSH1Q8WYL5 1049 aa18.99■□□□□ 0.63
SCAP-207ENST00000441517 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
SCAP-207ENST00000441517 HSCBQ8IWL3 235 aa18.97■□□□□ 0.63
SCAP-207ENST00000441517 MAGI2Q86UL8 1455 aa18.97■□□□□ 0.63
SCAP-207ENST00000441517 UHRF1BP1Q6BDS2 1440 aa18.97■□□□□ 0.63
SCAP-207ENST00000441517 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
SCAP-207ENST00000441517 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
SCAP-207ENST00000441517 ERCC6L2Q5T890 1561 aa18.96■□□□□ 0.63
SCAP-207ENST00000441517 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
SCAP-207ENST00000441517 FAM83GA6ND36 823 aa18.96■□□□□ 0.63
SCAP-207ENST00000441517 ADGRL1O94910 1474 aa18.95■□□□□ 0.62
SCAP-207ENST00000441517 IPO8O15397 1037 aaKnown RBP18.95■□□□□ 0.62
SCAP-207ENST00000441517 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
SCAP-207ENST00000441517 TAOK2Q9UL54 1235 aa18.95■□□□□ 0.62
SCAP-207ENST00000441517 ADGRL2O95490 1459 aa18.94■□□□□ 0.62
SCAP-207ENST00000441517 FANCAO15360 1455 aa18.94■□□□□ 0.62
SCAP-207ENST00000441517 PLCH2O75038 1416 aa18.94■□□□□ 0.62
SCAP-207ENST00000441517 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
SCAP-207ENST00000441517 KDM5CP41229 1560 aa18.93■□□□□ 0.62
SCAP-207ENST00000441517 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
SCAP-207ENST00000441517 UGGT1Q9NYU2 1555 aa18.92■□□□□ 0.62
SCAP-207ENST00000441517 NME9Q86XW9 330 aa18.92■□□□□ 0.62
SCAP-207ENST00000441517 SCAF11Q99590 1463 aaKnown RBP18.92■□□□□ 0.62
SCAP-207ENST00000441517 PDE3AQ14432 1141 aa18.91■□□□□ 0.62
SCAP-207ENST00000441517 C22orf23Q9BZE7 217 aa18.91■□□□□ 0.62
SCAP-207ENST00000441517 TRIM27P14373 513 aa18.9■□□□□ 0.62
SCAP-207ENST00000441517 ARHGEF12Q9NZN5 1544 aa18.9■□□□□ 0.62
SCAP-207ENST00000441517 COL17A1Q9UMD9 1497 aaPredicted RBP18.9■□□□□ 0.62
SCAP-207ENST00000441517 COG3Q96JB2 828 aa18.89■□□□□ 0.61
SCAP-207ENST00000441517 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
SCAP-207ENST00000441517 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
SCAP-207ENST00000441517 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
SCAP-207ENST00000441517 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
SCAP-207ENST00000441517 TRHP20396 242 aaPredicted RBP18.88■□□□□ 0.61
SCAP-207ENST00000441517 DDX19BQ9UMR2 479 aa18.87■□□□□ 0.61
SCAP-207ENST00000441517 NKTRP30414 1462 aaKnown RBP18.87■□□□□ 0.61
SCAP-207ENST00000441517 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
SCAP-207ENST00000441517 FYB1O15117 783 aa18.86■□□□□ 0.61
SCAP-207ENST00000441517 SULT6B1Q6IMI4 303 aa18.86■□□□□ 0.61
SCAP-207ENST00000441517 SAMD9LQ8IVG5 1584 aa18.86■□□□□ 0.61
SCAP-207ENST00000441517 MCM10Q7L590 875 aa18.85■□□□□ 0.61
SCAP-207ENST00000441517 RTF1Q92541 710 aaKnown RBP18.85■□□□□ 0.61
SCAP-207ENST00000441517 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
SCAP-207ENST00000441517 CEBPAP49715 358 aaPredicted RBP18.85■□□□□ 0.61
SCAP-207ENST00000441517 CD109Q6YHK3 1445 aa18.85■□□□□ 0.61
SCAP-207ENST00000441517 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
SCAP-207ENST00000441517 USP35Q9P2H5 1018 aa18.85■□□□□ 0.61
SCAP-207ENST00000441517 AMPHP49418 695 aa18.84■□□□□ 0.61
SCAP-207ENST00000441517 TSPYL6Q8N831 410 aa18.84■□□□□ 0.61
SCAP-207ENST00000441517 NAP1L5Q96NT1 182 aaPredicted RBP18.84■□□□□ 0.61
SCAP-207ENST00000441517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.84■□□□□ 0.613e-6■■■□□ 15.3
SCAP-207ENST00000441517 EIF2S2P20042 333 aaKnown RBP18.82■□□□□ 0.6
SCAP-207ENST00000441517 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
SCAP-207ENST00000441517 A0A0G2JS52 829 aa18.82■□□□□ 0.6
SCAP-207ENST00000441517 TTC37Q6PGP7 1564 aa18.81■□□□□ 0.6
SCAP-207ENST00000441517 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
SCAP-207ENST00000441517 KDM2BQ8NHM5 1336 aa18.81■□□□□ 0.6
SCAP-207ENST00000441517 TWISTNBQ3B726 338 aaPredicted RBP18.81■□□□□ 0.6
SCAP-207ENST00000441517 ARID3AQ99856 593 aa18.81■□□□□ 0.6
SCAP-207ENST00000441517 SMARCA5O60264 1052 aaPredicted RBP18.81■□□□□ 0.6
SCAP-207ENST00000441517 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
SCAP-207ENST00000441517 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
SCAP-207ENST00000441517 STAC3Q96MF2 364 aa18.8■□□□□ 0.6
SCAP-207ENST00000441517 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
SCAP-207ENST00000441517 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
SCAP-207ENST00000441517 RILPL2Q969X0 211 aa18.79■□□□□ 0.6
SCAP-207ENST00000441517 TRIM44Q96DX7 344 aaPredicted RBP18.79■□□□□ 0.6
SCAP-207ENST00000441517 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
SCAP-207ENST00000441517 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
SCAP-207ENST00000441517 CCDC9Q9Y3X0 531 aaKnown RBP18.79■□□□□ 0.6
SCAP-207ENST00000441517 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
SCAP-207ENST00000441517 ASXL1Q8IXJ9 1541 aa18.78■□□□□ 0.6
SCAP-207ENST00000441517 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
SCAP-207ENST00000441517 AEBP1Q8IUX7 1158 aa18.78■□□□□ 0.6
SCAP-207ENST00000441517 ABCA8O94911 1581 aa18.78■□□□□ 0.6
SCAP-207ENST00000441517 DUOX2Q9NRD8 1548 aa18.78■□□□□ 0.6
SCAP-207ENST00000441517 CDC42BPAQ5VT25 1732 aa18.77■□□□□ 0.6
SCAP-207ENST00000441517 F6X3S4 739 aa18.77■□□□□ 0.59
SCAP-207ENST00000441517 OS9Q13438 667 aaPredicted RBP18.77■□□□□ 0.59
SCAP-207ENST00000441517 WDR7Q9Y4E6 1490 aa18.76■□□□□ 0.59
SCAP-207ENST00000441517 GOLGA6L3A6NEY3 463 aa18.75■□□□□ 0.59
SCAP-207ENST00000441517 DTNBO60941 627 aa18.75■□□□□ 0.59
SCAP-207ENST00000441517 ANP32BQ92688 251 aaKnown RBP18.75■□□□□ 0.59
SCAP-207ENST00000441517 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
SCAP-207ENST00000441517 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
SCAP-207ENST00000441517 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
SCAP-207ENST00000441517 KDM5DQ9BY66 1539 aa18.73■□□□□ 0.59
SCAP-207ENST00000441517 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
SCAP-207ENST00000441517 NUDT16Q96DE0 195 aaKnown RBP18.73■□□□□ 0.59
SCAP-207ENST00000441517 ATP10AO60312 1499 aa18.72■□□□□ 0.59
SCAP-207ENST00000441517 FKBP5Q13451 457 aaPredicted RBP18.72■□□□□ 0.59
SCAP-207ENST00000441517 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms