RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 LRP6O75581 1613 aa26.55■■□□□ 1.84
SMPD4-210ENST00000441135 LRRC59Q96AG4 307 aaKnown RBP26.55■■□□□ 1.84
SMPD4-210ENST00000441135 SIRT1Q96EB6 747 aa26.54■■□□□ 1.84
SMPD4-210ENST00000441135 DHX57Q6P158 1386 aaKnown RBP26.54■■□□□ 1.84
SMPD4-210ENST00000441135 CFAP70Q5T0N1 1121 aa26.53■■□□□ 1.84
SMPD4-210ENST00000441135 WAPLQ7Z5K2 1190 aa26.53■■□□□ 1.84
SMPD4-210ENST00000441135 PLEKHH1Q9ULM0 1364 aa26.51■■□□□ 1.83
SMPD4-210ENST00000441135 MEX3CQ5U5Q3 659 aaKnown RBP26.51■■□□□ 1.83
SMPD4-210ENST00000441135 ORAI2Q96SN7 254 aa26.51■■□□□ 1.83
SMPD4-210ENST00000441135 DDX17Q92841 729 aaKnown RBP26.5■■□□□ 1.83
SMPD4-210ENST00000441135 SOS2Q07890 1332 aaPredicted RBP26.48■■□□□ 1.83
SMPD4-210ENST00000441135 PNPLA6Q8IY17 1366 aa26.47■■□□□ 1.83
SMPD4-210ENST00000441135 POTEAQ6S8J7 498 aa26.47■■□□□ 1.83
SMPD4-210ENST00000441135 DCAF11Q8TEB1 546 aa26.47■■□□□ 1.83
SMPD4-210ENST00000441135 DLC1Q96QB1 1528 aa26.46■■□□□ 1.83
SMPD4-210ENST00000441135 ADGRB1O14514 1584 aa26.46■■□□□ 1.83
SMPD4-210ENST00000441135 ESCO1Q5FWF5 840 aa26.45■■□□□ 1.82
SMPD4-210ENST00000441135 NPHP3Q7Z494 1330 aa26.44■■□□□ 1.82
SMPD4-210ENST00000441135 NUTM2BA6NNL0 878 aaPredicted RBP26.44■■□□□ 1.82
SMPD4-210ENST00000441135 NUTM2EB1AL46 878 aaPredicted RBP26.44■■□□□ 1.82
SMPD4-210ENST00000441135 NUTM2AQ8IVF1 878 aaPredicted RBP26.44■■□□□ 1.82
SMPD4-210ENST00000441135 KDM2AQ9Y2K7 1162 aa26.44■■□□□ 1.82
SMPD4-210ENST00000441135 ZNF772Q68DY9 489 aaPredicted RBP26.42■■□□□ 1.82
SMPD4-210ENST00000441135 FMN2Q9NZ56 1722 aa26.42■■□□□ 1.82
SMPD4-210ENST00000441135 PRAM1Q96QH2 718 aa26.41■■□□□ 1.82
SMPD4-210ENST00000441135 PXDNQ92626 1479 aa26.38■■□□□ 1.81
SMPD4-210ENST00000441135 NUTM2FA1L443 756 aa26.38■■□□□ 1.81
SMPD4-210ENST00000441135 POGKQ9P215 609 aa26.38■■□□□ 1.81
SMPD4-210ENST00000441135 KIF1AQ12756 1690 aa26.36■■□□□ 1.81
SMPD4-210ENST00000441135 FOXO3O43524 673 aa26.35■■□□□ 1.81
SMPD4-210ENST00000441135 ADGRB2O60241 1585 aa26.34■■□□□ 1.81
SMPD4-210ENST00000441135 SAFB2Q14151 953 aaKnown RBP eCLIP26.34■■□□□ 1.81
SMPD4-210ENST00000441135 TRAK1Q9UPV9 953 aa26.33■■□□□ 1.81
SMPD4-210ENST00000441135 COL22A1Q8NFW1 1626 aaPredicted RBP26.32■■□□□ 1.8
SMPD4-210ENST00000441135 AFF2P51816 1311 aa26.32■■□□□ 1.8
SMPD4-210ENST00000441135 ANKARQ7Z5J8 1434 aa26.31■■□□□ 1.8
SMPD4-210ENST00000441135 C8orf37Q96NL8 207 aa26.3■■□□□ 1.8
SMPD4-210ENST00000441135 KIAA1210Q9ULL0 1709 aa26.3■■□□□ 1.8
SMPD4-210ENST00000441135 XPCQ01831 940 aaPredicted RBP26.29■■□□□ 1.8
SMPD4-210ENST00000441135 EIF3AQ14152 1382 aaKnown RBP26.29■■□□□ 1.8
SMPD4-210ENST00000441135 SIN3AQ96ST3 1273 aa26.28■■□□□ 1.8
SMPD4-210ENST00000441135 PHF8Q9UPP1 1060 aa26.28■■□□□ 1.8
SMPD4-210ENST00000441135 ADAMTS2O95450 1211 aa26.27■■□□□ 1.8
SMPD4-210ENST00000441135 PCGF6Q9BYE7 350 aa26.26■■□□□ 1.79
SMPD4-210ENST00000441135 RXRBP28702 533 aa26.24■■□□□ 1.79
SMPD4-210ENST00000441135 L3MBTL2Q969R5 705 aa26.24■■□□□ 1.79
SMPD4-210ENST00000441135 NGLY1Q96IV0 654 aa26.24■■□□□ 1.79
SMPD4-210ENST00000441135 SPATA31A3Q5VYP0 1347 aa26.23■■□□□ 1.79
SMPD4-210ENST00000441135 MINK1Q8N4C8 1332 aaPredicted RBP26.23■■□□□ 1.79
SMPD4-210ENST00000441135 HIRIP3Q9BW71 556 aaPredicted RBP26.23■■□□□ 1.79
SMPD4-210ENST00000441135 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
SMPD4-210ENST00000441135 KRT28Q7Z3Y7 464 aa26.22■■□□□ 1.79
SMPD4-210ENST00000441135 TULP4Q9NRJ4 1543 aa26.22■■□□□ 1.79
SMPD4-210ENST00000441135 ARHGEF28Q8N1W1 1705 aaKnown RBP26.22■■□□□ 1.79
SMPD4-210ENST00000441135 USP32Q8NFA0 1604 aa26.21■■□□□ 1.79
SMPD4-210ENST00000441135 PSME1Q06323 249 aa26.21■■□□□ 1.79
SMPD4-210ENST00000441135 WASLO00401 505 aaPredicted RBP26.2■■□□□ 1.78
SMPD4-210ENST00000441135 NEUROD1Q13562 356 aa26.2■■□□□ 1.78
SMPD4-210ENST00000441135 TNS3Q68CZ2 1445 aa26.2■■□□□ 1.78
SMPD4-210ENST00000441135 RGPD8O14715 1765 aaPredicted RBP26.2■■□□□ 1.78
SMPD4-210ENST00000441135 CLSPNQ9HAW4 1339 aa26.19■■□□□ 1.78
SMPD4-210ENST00000441135 SBNO1A3KN83 1393 aa26.19■■□□□ 1.78
SMPD4-210ENST00000441135 FNBP4Q8N3X1 1017 aaPredicted RBP26.17■■□□□ 1.78
SMPD4-210ENST00000441135 QTRT2Q9H974 415 aaKnown RBP26.16■■□□□ 1.78
SMPD4-210ENST00000441135 PRR36Q9H6K5 1346 aa26.15■■□□□ 1.78
SMPD4-210ENST00000441135 RBM6P78332 1123 aaKnown RBP26.15■■□□□ 1.78
SMPD4-210ENST00000441135 USP21Q9UK80 565 aa26.15■■□□□ 1.78
SMPD4-210ENST00000441135 ARHGEF10O15013 1369 aa26.15■■□□□ 1.78
SMPD4-210ENST00000441135 PMFBP1Q8TBY8 1022 aa26.14■■□□□ 1.78
SMPD4-210ENST00000441135 TONSLQ96HA7 1378 aa26.13■■□□□ 1.77
SMPD4-210ENST00000441135 GPRASP1Q5JY77 1395 aa26.12■■□□□ 1.77
SMPD4-210ENST00000441135 NBPF1Q3BBV0 1214 aa26.12■■□□□ 1.77
SMPD4-210ENST00000441135 TRPC5Q9UL62 973 aaPredicted RBP26.11■■□□□ 1.77
SMPD4-210ENST00000441135 MARF1Q9Y4F3 1742 aaKnown RBP26.11■■□□□ 1.77
SMPD4-210ENST00000441135 ATP7BP35670 1465 aa26.11■■□□□ 1.77
SMPD4-210ENST00000441135 TRPM1Q7Z4N2 1603 aa26.1■■□□□ 1.77
SMPD4-210ENST00000441135 RGS12O14924 1447 aa26.08■■□□□ 1.77
SMPD4-210ENST00000441135 ATRNO75882 1429 aa26.08■■□□□ 1.77
SMPD4-210ENST00000441135 HAP1P54257 671 aaPredicted RBP26.07■■□□□ 1.76
SMPD4-210ENST00000441135 LMOD2Q6P5Q4 547 aa26.07■■□□□ 1.76
SMPD4-210ENST00000441135 ITSN1Q15811 1721 aa26.07■■□□□ 1.76
SMPD4-210ENST00000441135 BCL9LQ86UU0 1499 aa26.06■■□□□ 1.76
SMPD4-210ENST00000441135 NGDNQ8NEJ9 315 aaKnown RBP26.06■■□□□ 1.76
SMPD4-210ENST00000441135 NUDT16Q96DE0 195 aaKnown RBP26.06■■□□□ 1.76
SMPD4-210ENST00000441135 TRPM3Q9HCF6 1732 aaPredicted RBP26.05■■□□□ 1.76
SMPD4-210ENST00000441135 CDK19Q9BWU1 502 aa26.05■■□□□ 1.76
SMPD4-210ENST00000441135 CENPJQ9HC77 1338 aaPredicted RBP26.05■■□□□ 1.76
SMPD4-210ENST00000441135 SLIT2O94813 1529 aa26.03■■□□□ 1.76
SMPD4-210ENST00000441135 TIMELESSQ9UNS1 1208 aa26.02■■□□□ 1.76
SMPD4-210ENST00000441135 CABLES1Q8TDN4 633 aa26.01■■□□□ 1.75
SMPD4-210ENST00000441135 ABCA3Q99758 1704 aa26.01■■□□□ 1.75
SMPD4-210ENST00000441135 CCDC61Q9Y6R9 512 aa26.01■■□□□ 1.75
SMPD4-210ENST00000441135 TNKS1BP1Q9C0C2 1729 aaKnown RBP26■■□□□ 1.75
SMPD4-210ENST00000441135 ALS2Q96Q42 1657 aa26■■□□□ 1.75
SMPD4-210ENST00000441135 RALGAPBQ86X10 1494 aa26■■□□□ 1.75
SMPD4-210ENST00000441135 ROCK2O75116 1388 aaKnown RBP26■■□□□ 1.75
SMPD4-210ENST00000441135 TOPAZ1Q8N9V7 1692 aa25.99■■□□□ 1.75
SMPD4-210ENST00000441135 NBPF8Q3BBV2 869 aa25.99■■□□□ 1.75
SMPD4-210ENST00000441135 UNC5CLQ8IV45 518 aa25.99■■□□□ 1.75
SMPD4-210ENST00000441135 UPF1Q92900 1129 aaKnown RBP eCLIP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms