RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
HDAC6-209ENST00000440653 CHD2O14647 1828 aaKnown RBP12.72□□□□□ -0.37
HDAC6-209ENST00000440653 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-209ENST00000440653 SENP3-EIF4A1A0A087X0R7 540 aa12.71□□□□□ -0.37
HDAC6-209ENST00000440653 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
HDAC6-209ENST00000440653 ATRNO75882 1429 aa12.71□□□□□ -0.38
HDAC6-209ENST00000440653 CLTCL1P53675 1640 aa12.7□□□□□ -0.38
HDAC6-209ENST00000440653 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
HDAC6-209ENST00000440653 KIF1BO60333 1816 aa12.7□□□□□ -0.38
HDAC6-209ENST00000440653 NBPF8Q3BBV2 869 aa12.7□□□□□ -0.38
HDAC6-209ENST00000440653 LRRC59Q96AG4 307 aaKnown RBP12.7□□□□□ -0.38
HDAC6-209ENST00000440653 C19orf44Q9H6X5 657 aa12.7□□□□□ -0.38
HDAC6-209ENST00000440653 GPRASP1Q5JY77 1395 aa12.69□□□□□ -0.38
HDAC6-209ENST00000440653 IFT172Q9UG01 1749 aa12.69□□□□□ -0.38
HDAC6-209ENST00000440653 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
HDAC6-209ENST00000440653 IDI1Q13907 227 aa12.68□□□□□ -0.38
HDAC6-209ENST00000440653 NCOA3Q9Y6Q9 1424 aa12.68□□□□□ -0.38
HDAC6-209ENST00000440653 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-209ENST00000440653 MYOM2P54296 1465 aa12.65□□□□□ -0.38
HDAC6-209ENST00000440653 STAC3Q96MF2 364 aa12.65□□□□□ -0.38
HDAC6-209ENST00000440653 GTF3C3Q9Y5Q9 886 aa12.65□□□□□ -0.38
HDAC6-209ENST00000440653 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
HDAC6-209ENST00000440653 HIRIP3Q9BW71 556 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-209ENST00000440653 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
HDAC6-209ENST00000440653 R3HDM1Q15032 1099 aaKnown RBP12.62□□□□□ -0.39
HDAC6-209ENST00000440653 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-209ENST00000440653 ADGRB3O60242 1522 aa12.62□□□□□ -0.39
HDAC6-209ENST00000440653 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
HDAC6-209ENST00000440653 KTN1Q86UP2 1357 aaKnown RBP12.61□□□□□ -0.39
HDAC6-209ENST00000440653 BRWD3Q6RI45 1802 aa12.6□□□□□ -0.39
HDAC6-209ENST00000440653 MST1RQ04912 1400 aa12.6□□□□□ -0.39
HDAC6-209ENST00000440653 ZNF784Q8NCA9 323 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-209ENST00000440653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■□□□ 14.1
HDAC6-209ENST00000440653 CARD11Q9BXL7 1154 aa12.59□□□□□ -0.39
HDAC6-209ENST00000440653 TBX22Q9Y458 520 aa12.59□□□□□ -0.39
HDAC6-209ENST00000440653 PLEKHG1Q9ULL1 1385 aa12.58□□□□□ -0.4
HDAC6-209ENST00000440653 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
HDAC6-209ENST00000440653 DCAF11Q8TEB1 546 aa12.58□□□□□ -0.4
HDAC6-209ENST00000440653 PPLO60437 1756 aa12.58□□□□□ -0.4
HDAC6-209ENST00000440653 C1QTNF8P60827 252 aa12.57□□□□□ -0.4
HDAC6-209ENST00000440653 CEP350Q5VT06 3117 aa12.56□□□□□ -0.4
HDAC6-209ENST00000440653 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
HDAC6-209ENST00000440653 GLI3P10071 1580 aa12.56□□□□□ -0.4
HDAC6-209ENST00000440653 EIF3AQ14152 1382 aaKnown RBP12.56□□□□□ -0.4
HDAC6-209ENST00000440653 ZFYVE9O95405 1425 aa12.55□□□□□ -0.4
HDAC6-209ENST00000440653 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-209ENST00000440653 NRXN1Q9ULB1 1477 aa12.54□□□□□ -0.4
HDAC6-209ENST00000440653 BAG6P46379 1132 aa12.54□□□□□ -0.4
HDAC6-209ENST00000440653 AMOTL2Q9Y2J4 779 aa12.54□□□□□ -0.4
HDAC6-209ENST00000440653 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
HDAC6-209ENST00000440653 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
HDAC6-209ENST00000440653 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
HDAC6-209ENST00000440653 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
HDAC6-209ENST00000440653 DCCP43146 1447 aa12.53□□□□□ -0.4
HDAC6-209ENST00000440653 MYO5BQ9ULV0 1848 aa12.52□□□□□ -0.41
HDAC6-209ENST00000440653 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
HDAC6-209ENST00000440653 C11orf95C9JLR9 678 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-209ENST00000440653 MYOM1P52179 1685 aa12.51□□□□□ -0.41
HDAC6-209ENST00000440653 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-209ENST00000440653 CAMTA1Q9Y6Y1 1673 aa12.5□□□□□ -0.41
HDAC6-209ENST00000440653 UTRNP46939 3433 aa12.5□□□□□ -0.41
HDAC6-209ENST00000440653 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
HDAC6-209ENST00000440653 NOS1P29475 1434 aa12.48□□□□□ -0.41
HDAC6-209ENST00000440653 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
HDAC6-209ENST00000440653 KRT27Q7Z3Y8 459 aa12.48□□□□□ -0.41
HDAC6-209ENST00000440653 UNC5CLQ8IV45 518 aa12.48□□□□□ -0.41
HDAC6-209ENST00000440653 ORAI2Q96SN7 254 aa12.48□□□□□ -0.41
HDAC6-209ENST00000440653 PIK3R4Q99570 1358 aa12.47□□□□□ -0.41
HDAC6-209ENST00000440653 ST20-MTHFSA0A0A6YYL1 179 aa12.47□□□□□ -0.41
HDAC6-209ENST00000440653 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
HDAC6-209ENST00000440653 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
HDAC6-209ENST00000440653 MARF1Q9Y4F3 1742 aaKnown RBP12.47□□□□□ -0.41
HDAC6-209ENST00000440653 COL22A1Q8NFW1 1626 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-209ENST00000440653 SBNO2Q9Y2G9 1366 aa12.46□□□□□ -0.41
HDAC6-209ENST00000440653 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.41
HDAC6-209ENST00000440653 SLC52A1Q9NWF4 448 aa12.46□□□□□ -0.41
HDAC6-209ENST00000440653 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-209ENST00000440653 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
HDAC6-209ENST00000440653 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
HDAC6-209ENST00000440653 C1orf167Q5SNV9 1468 aa12.45□□□□□ -0.42
HDAC6-209ENST00000440653 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.45□□□□□ -0.42
HDAC6-209ENST00000440653 PIK3C2GO75747 1445 aa12.45□□□□□ -0.42
HDAC6-209ENST00000440653 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
HDAC6-209ENST00000440653 NEXMIFQ5QGS0 1516 aa12.44□□□□□ -0.42
HDAC6-209ENST00000440653 TMF1P82094 1093 aa12.44□□□□□ -0.42
HDAC6-209ENST00000440653 RALBP1Q15311 655 aa12.44□□□□□ -0.42
HDAC6-209ENST00000440653 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
HDAC6-209ENST00000440653 FAM182BQ5T319 152 aa12.44□□□□□ -0.42
HDAC6-209ENST00000440653 MRS2Q9HD23 443 aa12.44□□□□□ -0.42
HDAC6-209ENST00000440653 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-209ENST00000440653 INSRP06213 1382 aa12.43□□□□□ -0.42
HDAC6-209ENST00000440653 ZBED9Q6R2W3 1325 aa12.43□□□□□ -0.42
HDAC6-209ENST00000440653 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-209ENST00000440653 ADGRL3Q9HAR2 1447 aa12.43□□□□□ -0.42
HDAC6-209ENST00000440653 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
HDAC6-209ENST00000440653 SLIT2O94813 1529 aa12.42□□□□□ -0.42
HDAC6-209ENST00000440653 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
HDAC6-209ENST00000440653 NEFLP07196 543 aa12.42□□□□□ -0.42
HDAC6-209ENST00000440653 ARHGEF28Q8N1W1 1705 aaKnown RBP12.42□□□□□ -0.42
HDAC6-209ENST00000440653 MYBBP1AQ9BQG0 1328 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms