RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 RBM33Q96EV2 1170 aaKnown RBP20.15■□□□□ 0.82
CPSF7-205ENST00000439958 KIAA1210Q9ULL0 1709 aa20.14■□□□□ 0.81
CPSF7-205ENST00000439958 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.81
CPSF7-205ENST00000439958 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
CPSF7-205ENST00000439958 ZFYVE9O95405 1425 aa20.13■□□□□ 0.81
CPSF7-205ENST00000439958 ALKQ9UM73 1620 aa20.12■□□□□ 0.81
CPSF7-205ENST00000439958 KDM5AP29375 1690 aaKnown RBP20.12■□□□□ 0.81
CPSF7-205ENST00000439958 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
CPSF7-205ENST00000439958 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
CPSF7-205ENST00000439958 HDGFL2Q7Z4V5 671 aaPredicted RBP20.11■□□□□ 0.81
CPSF7-205ENST00000439958 ADAMTS8Q9UP79 889 aa20.11■□□□□ 0.81
CPSF7-205ENST00000439958 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
CPSF7-205ENST00000439958 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
CPSF7-205ENST00000439958 QRICH2Q9H0J4 1663 aa20.1■□□□□ 0.81
CPSF7-205ENST00000439958 SBNO2Q9Y2G9 1366 aa20.09■□□□□ 0.81
CPSF7-205ENST00000439958 PLEKHG5O94827 1062 aa20.09■□□□□ 0.81
CPSF7-205ENST00000439958 SOX12O15370 315 aa20.09■□□□□ 0.81
CPSF7-205ENST00000439958 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
CPSF7-205ENST00000439958 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.8
CPSF7-205ENST00000439958 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
CPSF7-205ENST00000439958 C14orf37Q86TY3 774 aa20.07■□□□□ 0.8
CPSF7-205ENST00000439958 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
CPSF7-205ENST00000439958 FBLN1P23142 703 aa20.05■□□□□ 0.8
CPSF7-205ENST00000439958 MTHFSP49914 203 aa20.04■□□□□ 0.8
CPSF7-205ENST00000439958 WASLO00401 505 aaPredicted RBP20.04■□□□□ 0.8
CPSF7-205ENST00000439958 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
CPSF7-205ENST00000439958 FER1L4A9Z1Z3 1794 aa20.03■□□□□ 0.8
CPSF7-205ENST00000439958 PTPRMP28827 1452 aa20.03■□□□□ 0.8
CPSF7-205ENST00000439958 ATAD2Q6PL18 1390 aa20.03■□□□□ 0.8
CPSF7-205ENST00000439958 TULP4Q9NRJ4 1543 aa20.03■□□□□ 0.8
CPSF7-205ENST00000439958 U2SURPO15042 1029 aaKnown RBP20.02■□□□□ 0.8
CPSF7-205ENST00000439958 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.8
CPSF7-205ENST00000439958 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.79
CPSF7-205ENST00000439958 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
CPSF7-205ENST00000439958 NLRP1Q9C000 1473 aa20.01■□□□□ 0.79
CPSF7-205ENST00000439958 ARHGEF28Q8N1W1 1705 aaKnown RBP20■□□□□ 0.79
CPSF7-205ENST00000439958 ANKRD36BQ8N2N9 1353 aa20■□□□□ 0.79
CPSF7-205ENST00000439958 ABCC11Q96J66 1382 aa20■□□□□ 0.79
CPSF7-205ENST00000439958 ROBO2Q9HCK4 1378 aa20■□□□□ 0.79
CPSF7-205ENST00000439958 CDCA7LQ96GN5 454 aa19.99■□□□□ 0.79
CPSF7-205ENST00000439958 CFAP53Q96M91 514 aa19.99■□□□□ 0.79
CPSF7-205ENST00000439958 RRP7AQ9Y3A4 280 aaKnown RBP19.98■□□□□ 0.79
CPSF7-205ENST00000439958 C3P01024 1663 aa19.98■□□□□ 0.79
CPSF7-205ENST00000439958 KCNA6P17658 529 aa19.98■□□□□ 0.79
CPSF7-205ENST00000439958 U2AF1L5P0DN76 240 aaPredicted RBP19.97■□□□□ 0.79
CPSF7-205ENST00000439958 U2AF1Q01081 240 aaKnown RBP eCLIP19.97■□□□□ 0.79
CPSF7-205ENST00000439958 APAF1O14727 1248 aa19.97■□□□□ 0.79
CPSF7-205ENST00000439958 RIMS1Q86UR5 1692 aaKnown RBP19.97■□□□□ 0.79
CPSF7-205ENST00000439958 CCDC61Q9Y6R9 512 aa19.97■□□□□ 0.79
CPSF7-205ENST00000439958 ZRANB1Q9UGI0 708 aa19.96■□□□□ 0.79
CPSF7-205ENST00000439958 MYOM1P52179 1685 aa19.96■□□□□ 0.79
CPSF7-205ENST00000439958 FYB1O15117 783 aa19.96■□□□□ 0.79
CPSF7-205ENST00000439958 PLEKHG1Q9ULL1 1385 aa19.95■□□□□ 0.78
CPSF7-205ENST00000439958 NME9Q86XW9 330 aa19.95■□□□□ 0.78
CPSF7-205ENST00000439958 NGDNQ8NEJ9 315 aaKnown RBP19.94■□□□□ 0.78
CPSF7-205ENST00000439958 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
CPSF7-205ENST00000439958 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
CPSF7-205ENST00000439958 UBR1Q8IWV7 1749 aa19.93■□□□□ 0.78
CPSF7-205ENST00000439958 MYO3AQ8NEV4 1616 aa19.93■□□□□ 0.78
CPSF7-205ENST00000439958 PPIP5K1Q6PFW1 1433 aa19.93■□□□□ 0.78
CPSF7-205ENST00000439958 TBX22Q9Y458 520 aa19.92■□□□□ 0.78
CPSF7-205ENST00000439958 HSPA2P54652 639 aa19.92■□□□□ 0.78
CPSF7-205ENST00000439958 PAK3O75914 559 aaPredicted RBP19.91■□□□□ 0.78
CPSF7-205ENST00000439958 NUTM2GQ5VZR2 741 aa19.9■□□□□ 0.78
CPSF7-205ENST00000439958 PUS7Q96PZ0 661 aaKnown RBP19.89■□□□□ 0.78
CPSF7-205ENST00000439958 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
CPSF7-205ENST00000439958 NPC1L1Q9UHC9 1359 aa19.88■□□□□ 0.77
CPSF7-205ENST00000439958 RRS1Q15050 365 aaKnown RBP19.87■□□□□ 0.77
CPSF7-205ENST00000439958 COG3Q96JB2 828 aa19.87■□□□□ 0.77
CPSF7-205ENST00000439958 ZBTB7CA1YPR0 619 aa19.87■□□□□ 0.77
CPSF7-205ENST00000439958 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
CPSF7-205ENST00000439958 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
CPSF7-205ENST00000439958 ACEP12821 1306 aa19.86■□□□□ 0.77
CPSF7-205ENST00000439958 NINLQ9Y2I6 1382 aa19.85■□□□□ 0.77
CPSF7-205ENST00000439958 NRXN3Q9Y4C0 1643 aa19.85■□□□□ 0.77
CPSF7-205ENST00000439958 EMILIN1Q9Y6C2 1016 aa19.84■□□□□ 0.77
CPSF7-205ENST00000439958 PELP1Q8IZL8 1130 aaKnown RBP19.83■□□□□ 0.77
CPSF7-205ENST00000439958 CEP170BQ9Y4F5 1589 aaPredicted RBP19.82■□□□□ 0.76
CPSF7-205ENST00000439958 RCAN3Q9UKA8 241 aa19.82■□□□□ 0.76
CPSF7-205ENST00000439958 HMOX1P09601 288 aa19.81■□□□□ 0.76
CPSF7-205ENST00000439958 XPCQ01831 940 aaPredicted RBP19.81■□□□□ 0.76
CPSF7-205ENST00000439958 GOLGA2Q08379 1002 aa19.81■□□□□ 0.76
CPSF7-205ENST00000439958 PLIN1O60240 522 aa19.8■□□□□ 0.76
CPSF7-205ENST00000439958 MAPK8IP3Q9UPT6 1336 aa19.8■□□□□ 0.76
CPSF7-205ENST00000439958 FAM135BQ49AJ0 1406 aa19.8■□□□□ 0.76
CPSF7-205ENST00000439958 TCP11L2Q8N4U5 519 aa19.8■□□□□ 0.76
CPSF7-205ENST00000439958 DIAPH1O60610 1272 aaKnown RBP19.8■□□□□ 0.76
CPSF7-205ENST00000439958 ESCO1Q5FWF5 840 aa19.8■□□□□ 0.76
CPSF7-205ENST00000439958 B4GALNT3Q6L9W6 998 aa19.8■□□□□ 0.76
CPSF7-205ENST00000439958 PROSER2Q86WR7 435 aaPredicted RBP19.8■□□□□ 0.76
CPSF7-205ENST00000439958 NEFMP07197 916 aa19.79■□□□□ 0.76
CPSF7-205ENST00000439958 SMG6Q86US8 1419 aaKnown RBP19.78■□□□□ 0.76
CPSF7-205ENST00000439958 NSD2O96028 1365 aa19.78■□□□□ 0.76
CPSF7-205ENST00000439958 SIRT1Q96EB6 747 aa19.78■□□□□ 0.76
CPSF7-205ENST00000439958 ZNF692Q9BU19 519 aaPredicted RBP19.78■□□□□ 0.76
CPSF7-205ENST00000439958 DLC1Q96QB1 1528 aa19.78■□□□□ 0.76
CPSF7-205ENST00000439958 CD163L1Q9NR16 1453 aa19.76■□□□□ 0.75
CPSF7-205ENST00000439958 POLR3AO14802 1390 aaPredicted RBP19.76■□□□□ 0.75
CPSF7-205ENST00000439958 PDE3BQ13370 1112 aa19.76■□□□□ 0.75
CPSF7-205ENST00000439958 RUNDC1Q96C34 613 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms