RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PLEKHH1Q9ULM0 1364 aa13.76□□□□□ -0.21
CPNE1-218ENST00000439806 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-218ENST00000439806 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
CPNE1-218ENST00000439806 NSD2O96028 1365 aa13.75□□□□□ -0.21
CPNE1-218ENST00000439806 NINLQ9Y2I6 1382 aa13.75□□□□□ -0.21
CPNE1-218ENST00000439806 CGNL1Q0VF96 1302 aa13.75□□□□□ -0.21
CPNE1-218ENST00000439806 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
CPNE1-218ENST00000439806 STK26Q9P289 416 aa13.75□□□□□ -0.21
CPNE1-218ENST00000439806 PTPRMP28827 1452 aa13.74□□□□□ -0.21
CPNE1-218ENST00000439806 YTHDC2Q9H6S0 1430 aaKnown RBP13.74□□□□□ -0.21
CPNE1-218ENST00000439806 GOLGA2Q08379 1002 aa13.74□□□□□ -0.21
CPNE1-218ENST00000439806 SAFB2Q14151 953 aaKnown RBP eCLIP13.73□□□□□ -0.213e-13■□□□□ 9.1
CPNE1-218ENST00000439806 NGEFQ8N5V2 710 aa13.73□□□□□ -0.21
CPNE1-218ENST00000439806 EXOC6Q8TAG9 804 aa13.73□□□□□ -0.21
CPNE1-218ENST00000439806 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-218ENST00000439806 POGKQ9P215 609 aa13.73□□□□□ -0.21
CPNE1-218ENST00000439806 ATAD2Q6PL18 1390 aa13.72□□□□□ -0.21
CPNE1-218ENST00000439806 KIF20BQ96Q89 1820 aa13.72□□□□□ -0.21
CPNE1-218ENST00000439806 MLECQ14165 292 aa13.72□□□□□ -0.21
CPNE1-218ENST00000439806 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
CPNE1-218ENST00000439806 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
CPNE1-218ENST00000439806 CABP2Q9NPB3 220 aa13.72□□□□□ -0.21
CPNE1-218ENST00000439806 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
CPNE1-218ENST00000439806 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
CPNE1-218ENST00000439806 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
CPNE1-218ENST00000439806 DLC1Q96QB1 1528 aa13.71□□□□□ -0.21
CPNE1-218ENST00000439806 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.21
CPNE1-218ENST00000439806 SRPK2P78362 688 aaKnown RBP13.71□□□□□ -0.21
CPNE1-218ENST00000439806 APAF1O14727 1248 aa13.7□□□□□ -0.22
CPNE1-218ENST00000439806 MINK1Q8N4C8 1332 aaPredicted RBP13.69□□□□□ -0.22
CPNE1-218ENST00000439806 TNNT2P45379 298 aaPredicted RBP13.69□□□□□ -0.22
CPNE1-218ENST00000439806 SLFN5Q08AF3 891 aa13.69□□□□□ -0.22
CPNE1-218ENST00000439806 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
CPNE1-218ENST00000439806 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.69□□□□□ -0.22
CPNE1-218ENST00000439806 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
CPNE1-218ENST00000439806 FANCIQ9NVI1 1328 aa13.68□□□□□ -0.22
CPNE1-218ENST00000439806 PLIN1O60240 522 aa13.67□□□□□ -0.22
CPNE1-218ENST00000439806 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
CPNE1-218ENST00000439806 TERF2IPQ9NYB0 399 aa13.67□□□□□ -0.22
CPNE1-218ENST00000439806 A0A1W2PP64 1363 aa13.67□□□□□ -0.22
CPNE1-218ENST00000439806 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
CPNE1-218ENST00000439806 NKTRP30414 1462 aaKnown RBP13.67□□□□□ -0.22
CPNE1-218ENST00000439806 E9PSI1 815 aa13.66□□□□□ -0.22
CPNE1-218ENST00000439806 HDGFL2Q7Z4V5 671 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-218ENST00000439806 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.66□□□□□ -0.22
CPNE1-218ENST00000439806 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
CPNE1-218ENST00000439806 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
CPNE1-218ENST00000439806 MTHFSP49914 203 aa13.65□□□□□ -0.22
CPNE1-218ENST00000439806 IQSEC2Q5JU85 1478 aa13.65□□□□□ -0.22
CPNE1-218ENST00000439806 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
CPNE1-218ENST00000439806 TRMT2AQ8IZ69 625 aaKnown RBP13.64□□□□□ -0.23
CPNE1-218ENST00000439806 MED14O60244 1454 aa13.63□□□□□ -0.23
CPNE1-218ENST00000439806 ZMYM3Q14202 1370 aa13.63□□□□□ -0.23
CPNE1-218ENST00000439806 CDK19Q9BWU1 502 aa13.63□□□□□ -0.23
CPNE1-218ENST00000439806 UBR1Q8IWV7 1749 aa13.62□□□□□ -0.23
CPNE1-218ENST00000439806 TNRQ92752 1358 aa13.62□□□□□ -0.23
CPNE1-218ENST00000439806 HDGFP51858 240 aaKnown RBP13.62□□□□□ -0.23
CPNE1-218ENST00000439806 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
CPNE1-218ENST00000439806 ADGRB2O60241 1585 aa13.61□□□□□ -0.23
CPNE1-218ENST00000439806 ATP7BP35670 1465 aa13.61□□□□□ -0.23
CPNE1-218ENST00000439806 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
CPNE1-218ENST00000439806 ITSN1Q15811 1721 aa13.6□□□□□ -0.23
CPNE1-218ENST00000439806 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
CPNE1-218ENST00000439806 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
CPNE1-218ENST00000439806 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
CPNE1-218ENST00000439806 WWC1Q8IX03 1113 aa13.59□□□□□ -0.23
CPNE1-218ENST00000439806 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
CPNE1-218ENST00000439806 U2AF1L5P0DN76 240 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-218ENST00000439806 U2AF1Q01081 240 aaKnown RBP eCLIP13.58□□□□□ -0.242e-6■□□□□ 8.5
CPNE1-218ENST00000439806 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
CPNE1-218ENST00000439806 C20orf194Q5TEA3 1177 aa13.58□□□□□ -0.24
CPNE1-218ENST00000439806 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-218ENST00000439806 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
CPNE1-218ENST00000439806 CPS1P31327 1500 aa13.58□□□□□ -0.24
CPNE1-218ENST00000439806 COL3A1P02461 1466 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-218ENST00000439806 WDR63Q8IWG1 891 aa13.57□□□□□ -0.24
CPNE1-218ENST00000439806 NLRP1Q9C000 1473 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 AKAP12Q02952 1782 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 FYB1O15117 783 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 CCDC27Q2M243 656 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
CPNE1-218ENST00000439806 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 MON2Q7Z3U7 1717 aa13.56□□□□□ -0.24
CPNE1-218ENST00000439806 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
CPNE1-218ENST00000439806 U2SURPO15042 1029 aaKnown RBP13.55□□□□□ -0.24
CPNE1-218ENST00000439806 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
CPNE1-218ENST00000439806 METP08581 1390 aa13.55□□□□□ -0.24
CPNE1-218ENST00000439806 FAM135BQ49AJ0 1406 aa13.55□□□□□ -0.24
CPNE1-218ENST00000439806 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
CPNE1-218ENST00000439806 FER1L4A9Z1Z3 1794 aa13.54□□□□□ -0.24
CPNE1-218ENST00000439806 MSH5O43196 834 aa13.54□□□□□ -0.24
CPNE1-218ENST00000439806 MS4A1P11836 297 aa13.54□□□□□ -0.24
CPNE1-218ENST00000439806 MAPK8IP3Q9UPT6 1336 aa13.54□□□□□ -0.24
CPNE1-218ENST00000439806 TECPR2O15040 1411 aa13.54□□□□□ -0.24
CPNE1-218ENST00000439806 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-218ENST00000439806 ANP32AP39687 249 aaKnown RBP13.53□□□□□ -0.24
CPNE1-218ENST00000439806 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-218ENST00000439806 SIRT1Q96EB6 747 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms