RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PER1O15534 1290 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-205ENST00000438362 TESK2Q96S53 571 aa8.27□□□□□ -1.09
CSDE1-205ENST00000438362 ARHGEF12Q9NZN5 1544 aa8.26□□□□□ -1.09
CSDE1-205ENST00000438362 DNMT1P26358 1616 aaKnown RBP8.26□□□□□ -1.09
CSDE1-205ENST00000438362 ITSN2Q9NZM3 1697 aa8.26□□□□□ -1.09
CSDE1-205ENST00000438362 RARSP54136 660 aaKnown RBP8.26□□□□□ -1.09
CSDE1-205ENST00000438362 ATF7IPQ6VMQ6 1270 aa8.26□□□□□ -1.09
CSDE1-205ENST00000438362 REC8O95072 547 aa8.26□□□□□ -1.09
CSDE1-205ENST00000438362 HMOX1P09601 288 aa8.26□□□□□ -1.09
CSDE1-205ENST00000438362 ZRSR1Q15695 479 aaKnown RBP8.26□□□□□ -1.09
CSDE1-205ENST00000438362 ANO8Q9HCE9 1232 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-205ENST00000438362 UHRF1BP1Q6BDS2 1440 aa8.26□□□□□ -1.09
CSDE1-205ENST00000438362 NSD3Q9BZ95 1437 aa8.26□□□□□ -1.09
CSDE1-205ENST00000438362 AMER1Q5JTC6 1135 aaPredicted RBP8.26□□□□□ -1.09
CSDE1-205ENST00000438362 NOB1Q9ULX3 412 aaKnown RBP8.26□□□□□ -1.09
CSDE1-205ENST00000438362 SCAF11Q99590 1463 aaKnown RBP8.26□□□□□ -1.09
CSDE1-205ENST00000438362 ATP10BO94823 1461 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 FGD1P98174 961 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 KIAA2012Q0VF49 1180 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 NOL8Q76FK4 1167 aaKnown RBP8.25□□□□□ -1.09
CSDE1-205ENST00000438362 MAGI3Q5TCQ9 1506 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 FAM43AQ8N2R8 423 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 PRKAR2BP31323 418 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 CHAF1AQ13111 956 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-205ENST00000438362 HSP90AA2PQ14568 343 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-205ENST00000438362 FOXD4L5Q5VV16 416 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-205ENST00000438362 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 FOXD4L4Q8WXT5 416 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-205ENST00000438362 CHMP4AQ9BY43 222 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 KIAA0556O60303 1618 aa8.25□□□□□ -1.09
CSDE1-205ENST00000438362 CDC45O75419 566 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 NUCB2P80303 420 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 ADAMTS12P58397 1594 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 GCC2Q8IWJ2 1684 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 NUTM2FA1L443 756 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 MCM4P33991 863 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 AMPHP49418 695 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 INTS3Q68E01 1043 aaKnown RBP8.24□□□□□ -1.09
CSDE1-205ENST00000438362 NUP160Q12769 1436 aa8.24□□□□□ -1.09
CSDE1-205ENST00000438362 GCC1Q96CN9 775 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 KIF21AQ7Z4S6 1674 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 RPGRIP1LQ68CZ1 1315 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 ADGRF5Q8IZF2 1346 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 IGHDP01880 384 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 RILPL2Q969X0 211 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 FAM135AQ9P2D6 1515 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 HOXD11P31277 338 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-205ENST00000438362 ABCA5Q8WWZ7 1642 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 ADGRL2O95490 1459 aa8.23□□□□□ -1.09
CSDE1-205ENST00000438362 PHF14O94880 888 aa8.22□□□□□ -1.09
CSDE1-205ENST00000438362 TMPOP42166 694 aaKnown RBP8.22□□□□□ -1.09
CSDE1-205ENST00000438362 NGDNQ8NEJ9 315 aaKnown RBP8.22□□□□□ -1.09
CSDE1-205ENST00000438362 SHANK2Q9UPX8 1470 aa8.22□□□□□ -1.09
CSDE1-205ENST00000438362 PRAM1Q96QH2 718 aa8.22□□□□□ -1.09
CSDE1-205ENST00000438362 C8orf34Q49A92 452 aa8.22□□□□□ -1.09
CSDE1-205ENST00000438362 PLEKHH1Q9ULM0 1364 aa8.22□□□□□ -1.09
CSDE1-205ENST00000438362 CHD1LQ86WJ1 897 aa8.21□□□□□ -1.09
CSDE1-205ENST00000438362 C1orf115Q9H7X2 142 aa8.21□□□□□ -1.09
CSDE1-205ENST00000438362 TWISTNBQ3B726 338 aaPredicted RBP8.21□□□□□ -1.1
CSDE1-205ENST00000438362 MCTP1Q6DN14 999 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 TMEM57Q8N5G2 664 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 ISY1Q9ULR0 285 aaKnown RBP8.21□□□□□ -1.1
CSDE1-205ENST00000438362 HDAC5Q9UQL6 1122 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 DISP1Q96F81 1524 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 GPRASP1Q5JY77 1395 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 DRC7Q8IY82 874 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 SSH1Q8WYL5 1049 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 ZNF428Q96B54 188 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 TBC1D2Q9BYX2 928 aa8.21□□□□□ -1.1
CSDE1-205ENST00000438362 ASXL1Q8IXJ9 1541 aa8.2□□□□□ -1.1
CSDE1-205ENST00000438362 NAP1L2Q9ULW6 460 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-205ENST00000438362 COL17A1Q9UMD9 1497 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-205ENST00000438362 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
CSDE1-205ENST00000438362 CIZ1Q9ULV3 898 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-205ENST00000438362 KDM6BO15054 1643 aa8.2□□□□□ -1.1
CSDE1-205ENST00000438362 NASPP49321 788 aaPredicted RBP8.2□□□□□ -1.1
CSDE1-205ENST00000438362 RABEP1Q15276 862 aa8.2□□□□□ -1.1
CSDE1-205ENST00000438362 GPATCH3Q96I76 525 aa8.2□□□□□ -1.1
CSDE1-205ENST00000438362 SLC52A1Q9NWF4 448 aa8.2□□□□□ -1.1
CSDE1-205ENST00000438362 CABP1Q9NZU7 370 aa8.2□□□□□ -1.1
CSDE1-205ENST00000438362 GOLGA6L6A8MZA4 724 aa8.19□□□□□ -1.1
CSDE1-205ENST00000438362 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-205ENST00000438362 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-205ENST00000438362 ATAD2Q6PL18 1390 aa8.19□□□□□ -1.1
CSDE1-205ENST00000438362 FCHSD2O94868 740 aa8.19□□□□□ -1.1
CSDE1-205ENST00000438362 LTV1Q96GA3 475 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-205ENST00000438362 ANO2Q9NQ90 1003 aa8.19□□□□□ -1.1
CSDE1-205ENST00000438362 TBC1D32Q96NH3 1257 aa8.19□□□□□ -1.1
CSDE1-205ENST00000438362 K7ELQ4 463 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-205ENST00000438362 NRDCO43847 1150 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 CDK19Q9BWU1 502 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 FKBP5Q13451 457 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-205ENST00000438362 GRPEL1Q9HAV7 217 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 ATP6V1DQ9Y5K8 247 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 EID1Q9Y6B2 187 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 INSRP06213 1382 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 PIK3C2GO75747 1445 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 SYCP2Q9BX26 1530 aa8.18□□□□□ -1.1
CSDE1-205ENST00000438362 OSCARQ8IYS5 282 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms