RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 WASLO00401 505 aaPredicted RBP13.72□□□□□ -0.21
AC004448.3-201ENST00000435953 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
AC004448.3-201ENST00000435953 PTCH1Q13635 1447 aa13.71□□□□□ -0.22
AC004448.3-201ENST00000435953 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
AC004448.3-201ENST00000435953 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
AC004448.3-201ENST00000435953 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
AC004448.3-201ENST00000435953 ZNF335Q9H4Z2 1342 aaPredicted RBP13.68□□□□□ -0.22
AC004448.3-201ENST00000435953 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
AC004448.3-201ENST00000435953 C14orf37Q86TY3 774 aa13.67□□□□□ -0.22
AC004448.3-201ENST00000435953 CPS1P31327 1500 aa13.67□□□□□ -0.22
AC004448.3-201ENST00000435953 NUDT16Q96DE0 195 aaKnown RBP13.66□□□□□ -0.22
AC004448.3-201ENST00000435953 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
AC004448.3-201ENST00000435953 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
AC004448.3-201ENST00000435953 TMC1Q8TDI8 760 aa13.65□□□□□ -0.22
AC004448.3-201ENST00000435953 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
AC004448.3-201ENST00000435953 NCOA3Q9Y6Q9 1424 aa13.64□□□□□ -0.23
AC004448.3-201ENST00000435953 TMEM94Q12767 1356 aa13.64□□□□□ -0.23
AC004448.3-201ENST00000435953 PANK3Q9H999 370 aa13.64□□□□□ -0.23
AC004448.3-201ENST00000435953 CABP1Q9NZU7 370 aa13.64□□□□□ -0.23
AC004448.3-201ENST00000435953 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
AC004448.3-201ENST00000435953 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
AC004448.3-201ENST00000435953 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
AC004448.3-201ENST00000435953 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
AC004448.3-201ENST00000435953 CHD2O14647 1828 aaKnown RBP13.63□□□□□ -0.23
AC004448.3-201ENST00000435953 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
AC004448.3-201ENST00000435953 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
AC004448.3-201ENST00000435953 NUTM2FA1L443 756 aa13.62□□□□□ -0.23
AC004448.3-201ENST00000435953 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
AC004448.3-201ENST00000435953 TULP4Q9NRJ4 1543 aa13.61□□□□□ -0.23
AC004448.3-201ENST00000435953 ATF3P18847 181 aa13.61□□□□□ -0.23
AC004448.3-201ENST00000435953 PRR36Q9H6K5 1346 aa13.61□□□□□ -0.23
AC004448.3-201ENST00000435953 PLEKHG3A1L390 1219 aa13.6□□□□□ -0.23
AC004448.3-201ENST00000435953 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
AC004448.3-201ENST00000435953 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
AC004448.3-201ENST00000435953 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
AC004448.3-201ENST00000435953 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.59□□□□□ -0.23
AC004448.3-201ENST00000435953 CADPS2Q86UW7 1296 aa13.59□□□□□ -0.23
AC004448.3-201ENST00000435953 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
AC004448.3-201ENST00000435953 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
AC004448.3-201ENST00000435953 CARD14Q9BXL6 1004 aa13.58□□□□□ -0.24
AC004448.3-201ENST00000435953 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.24
AC004448.3-201ENST00000435953 HDGFL2Q7Z4V5 671 aaPredicted RBP13.57□□□□□ -0.24
AC004448.3-201ENST00000435953 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
AC004448.3-201ENST00000435953 MSH6P52701 1360 aa13.57□□□□□ -0.24
AC004448.3-201ENST00000435953 KNSTRNQ9Y448 316 aa13.56□□□□□ -0.24
AC004448.3-201ENST00000435953 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
AC004448.3-201ENST00000435953 PMFBP1Q8TBY8 1022 aa13.55□□□□□ -0.24
AC004448.3-201ENST00000435953 PPIP5K1Q6PFW1 1433 aa13.55□□□□□ -0.24
AC004448.3-201ENST00000435953 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
AC004448.3-201ENST00000435953 ADGRB2O60241 1585 aa13.54□□□□□ -0.24
AC004448.3-201ENST00000435953 NGDNQ8NEJ9 315 aaKnown RBP13.54□□□□□ -0.24
AC004448.3-201ENST00000435953 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
AC004448.3-201ENST00000435953 SLAIN2Q9P270 581 aa13.54□□□□□ -0.24
AC004448.3-201ENST00000435953 PHF8Q9UPP1 1060 aa13.54□□□□□ -0.24
AC004448.3-201ENST00000435953 ACEP12821 1306 aa13.54□□□□□ -0.24
AC004448.3-201ENST00000435953 ANKRD36BQ8N2N9 1353 aa13.54□□□□□ -0.24
AC004448.3-201ENST00000435953 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
AC004448.3-201ENST00000435953 ANP32CO43423 234 aa13.52□□□□□ -0.25
AC004448.3-201ENST00000435953 AMER1Q5JTC6 1135 aaPredicted RBP13.52□□□□□ -0.25
AC004448.3-201ENST00000435953 DCCP43146 1447 aa13.52□□□□□ -0.25
AC004448.3-201ENST00000435953 ATP7BP35670 1465 aa13.52□□□□□ -0.25
AC004448.3-201ENST00000435953 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
AC004448.3-201ENST00000435953 A0A1W2PP64 1363 aa13.51□□□□□ -0.25
AC004448.3-201ENST00000435953 CDC42BPGQ6DT37 1551 aa13.5□□□□□ -0.25
AC004448.3-201ENST00000435953 C1orf167Q5SNV9 1468 aa13.5□□□□□ -0.25
AC004448.3-201ENST00000435953 CPSF1Q10570 1443 aaKnown RBP13.5□□□□□ -0.25
AC004448.3-201ENST00000435953 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
AC004448.3-201ENST00000435953 MIER1Q8N108 512 aa13.5□□□□□ -0.25
AC004448.3-201ENST00000435953 CD163L1Q9NR16 1453 aa13.49□□□□□ -0.25
AC004448.3-201ENST00000435953 POLR3AO14802 1390 aaPredicted RBP13.49□□□□□ -0.25
AC004448.3-201ENST00000435953 FOXO3O43524 673 aa13.49□□□□□ -0.25
AC004448.3-201ENST00000435953 PSME1Q06323 249 aa13.49□□□□□ -0.25
AC004448.3-201ENST00000435953 CNGB1Q14028 1251 aaPredicted RBP13.49□□□□□ -0.25
AC004448.3-201ENST00000435953 MST1RQ04912 1400 aa13.48□□□□□ -0.25
AC004448.3-201ENST00000435953 CGNL1Q0VF96 1302 aa13.48□□□□□ -0.25
AC004448.3-201ENST00000435953 FYB1O15117 783 aa13.48□□□□□ -0.25
AC004448.3-201ENST00000435953 CC2D1BQ5T0F9 858 aaKnown RBP13.48□□□□□ -0.25
AC004448.3-201ENST00000435953 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
AC004448.3-201ENST00000435953 NSD3Q9BZ95 1437 aa13.47□□□□□ -0.25
AC004448.3-201ENST00000435953 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
AC004448.3-201ENST00000435953 RALBP1Q15311 655 aa13.47□□□□□ -0.25
AC004448.3-201ENST00000435953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.25
AC004448.3-201ENST00000435953 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
AC004448.3-201ENST00000435953 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
AC004448.3-201ENST00000435953 NPC1L1Q9UHC9 1359 aa13.46□□□□□ -0.25
AC004448.3-201ENST00000435953 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
AC004448.3-201ENST00000435953 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
AC004448.3-201ENST00000435953 TOM1O60784 492 aa13.45□□□□□ -0.26
AC004448.3-201ENST00000435953 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
AC004448.3-201ENST00000435953 USP32Q8NFA0 1604 aa13.44□□□□□ -0.26
AC004448.3-201ENST00000435953 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
AC004448.3-201ENST00000435953 GGNBP2Q9H3C7 697 aa13.44□□□□□ -0.26
AC004448.3-201ENST00000435953 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
AC004448.3-201ENST00000435953 BRD4O60885 1362 aaPredicted RBP13.44□□□□□ -0.26
AC004448.3-201ENST00000435953 TTC21AQ8NDW8 1320 aa13.43□□□□□ -0.26
AC004448.3-201ENST00000435953 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
AC004448.3-201ENST00000435953 USP6P35125 1406 aa13.43□□□□□ -0.26
AC004448.3-201ENST00000435953 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
AC004448.3-201ENST00000435953 NME9Q86XW9 330 aa13.43□□□□□ -0.26
AC004448.3-201ENST00000435953 NPHP3Q7Z494 1330 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms