RNA–Protein interactions for RNA: ENST00000435795.5

TSSC4-204, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-204ENST00000435795 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
TSSC4-204ENST00000435795 STRCP1A6NGW2 1772 aa21.94■■□□□ 1.1
TSSC4-204ENST00000435795 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
TSSC4-204ENST00000435795 C19orf44Q9H6X5 657 aa21.94■■□□□ 1.1
TSSC4-204ENST00000435795 SLC24A1O60721 1099 aa21.92■■□□□ 1.1
TSSC4-204ENST00000435795 TESK2Q96S53 571 aa21.91■■□□□ 1.1
TSSC4-204ENST00000435795 MSH6P52701 1360 aa21.9■■□□□ 1.1
TSSC4-204ENST00000435795 ADGRL3Q9HAR2 1447 aa21.89■■□□□ 1.1
TSSC4-204ENST00000435795 ARHGEF28Q8N1W1 1705 aaKnown RBP21.89■■□□□ 1.1
TSSC4-204ENST00000435795 ATF3P18847 181 aa21.89■■□□□ 1.09
TSSC4-204ENST00000435795 CERKQ8TCT0 537 aa21.89■■□□□ 1.09
TSSC4-204ENST00000435795 EVC2Q86UK5 1308 aa21.88■■□□□ 1.09
TSSC4-204ENST00000435795 WASLO00401 505 aaPredicted RBP21.88■■□□□ 1.09
TSSC4-204ENST00000435795 SBNO2Q9Y2G9 1366 aa21.87■■□□□ 1.09
TSSC4-204ENST00000435795 TMF1P82094 1093 aa21.87■■□□□ 1.09
TSSC4-204ENST00000435795 CDK19Q9BWU1 502 aa21.87■■□□□ 1.09
TSSC4-204ENST00000435795 CADPS2Q86UW7 1296 aa21.86■■□□□ 1.09
TSSC4-204ENST00000435795 SRPK2P78362 688 aaKnown RBP21.84■■□□□ 1.09
TSSC4-204ENST00000435795 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.83■■□□□ 1.09
TSSC4-204ENST00000435795 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
TSSC4-204ENST00000435795 NUTM2FA1L443 756 aa21.82■■□□□ 1.08
TSSC4-204ENST00000435795 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
TSSC4-204ENST00000435795 DCCP43146 1447 aa21.8■■□□□ 1.08
TSSC4-204ENST00000435795 QRICH2Q9H0J4 1663 aa21.8■■□□□ 1.08
TSSC4-204ENST00000435795 DISP3Q9P2K9 1392 aa21.78■■□□□ 1.08
TSSC4-204ENST00000435795 TOM1O60784 492 aa21.78■■□□□ 1.08
TSSC4-204ENST00000435795 NUDT16Q96DE0 195 aaKnown RBP21.78■■□□□ 1.08
TSSC4-204ENST00000435795 PUS7Q96PZ0 661 aaKnown RBP21.78■■□□□ 1.08
TSSC4-204ENST00000435795 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
TSSC4-204ENST00000435795 IQSEC2Q5JU85 1478 aa21.77■■□□□ 1.08
TSSC4-204ENST00000435795 SLAIN2Q9P270 581 aa21.77■■□□□ 1.08
TSSC4-204ENST00000435795 ADGRB2O60241 1585 aa21.77■■□□□ 1.08
TSSC4-204ENST00000435795 TULP4Q9NRJ4 1543 aa21.76■■□□□ 1.07
TSSC4-204ENST00000435795 C11orf95C9JLR9 678 aaPredicted RBP21.76■■□□□ 1.07
TSSC4-204ENST00000435795 UBAP1LF5GYI3 381 aa21.76■■□□□ 1.07
TSSC4-204ENST00000435795 CDC42BPGQ6DT37 1551 aa21.76■■□□□ 1.07
TSSC4-204ENST00000435795 NALCNQ8IZF0 1738 aa21.76■■□□□ 1.07
TSSC4-204ENST00000435795 CCDC61Q9Y6R9 512 aa21.75■■□□□ 1.07
TSSC4-204ENST00000435795 PRR36Q9H6K5 1346 aa21.75■■□□□ 1.07
TSSC4-204ENST00000435795 XIRP1Q702N8 1843 aaKnown RBP21.74■■□□□ 1.07
TSSC4-204ENST00000435795 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
TSSC4-204ENST00000435795 MST1RQ04912 1400 aa21.73■■□□□ 1.07
TSSC4-204ENST00000435795 ANKARQ7Z5J8 1434 aa21.73■■□□□ 1.07
TSSC4-204ENST00000435795 ESCO1Q5FWF5 840 aa21.73■■□□□ 1.07
TSSC4-204ENST00000435795 C1orf167Q5SNV9 1468 aa21.72■■□□□ 1.07
TSSC4-204ENST00000435795 TMC1Q8TDI8 760 aa21.72■■□□□ 1.07
TSSC4-204ENST00000435795 ORAI2Q96SN7 254 aa21.71■■□□□ 1.07
TSSC4-204ENST00000435795 KIF7Q2M1P5 1343 aa21.71■■□□□ 1.07
TSSC4-204ENST00000435795 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
TSSC4-204ENST00000435795 CABP1Q9NZU7 370 aa21.7■■□□□ 1.06
TSSC4-204ENST00000435795 PHF8Q9UPP1 1060 aa21.69■■□□□ 1.06
TSSC4-204ENST00000435795 PIP4K2BP78356 416 aa21.68■■□□□ 1.06
TSSC4-204ENST00000435795 PMFBP1Q8TBY8 1022 aa21.68■■□□□ 1.06
TSSC4-204ENST00000435795 CCDC7Q96M83 1385 aa21.68■■□□□ 1.06
TSSC4-204ENST00000435795 ATP7BP35670 1465 aa21.67■■□□□ 1.06
TSSC4-204ENST00000435795 WASHC2AQ641Q2 1341 aa21.67■■□□□ 1.06
TSSC4-204ENST00000435795 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
TSSC4-204ENST00000435795 PLEKHG3A1L390 1219 aa21.67■■□□□ 1.06
TSSC4-204ENST00000435795 BRINP3Q76B58 766 aa21.67■■□□□ 1.06
TSSC4-204ENST00000435795 SLC12A5Q9H2X9 1139 aa21.67■■□□□ 1.06
TSSC4-204ENST00000435795 FMN2Q9NZ56 1722 aa21.66■■□□□ 1.06
TSSC4-204ENST00000435795 NGDNQ8NEJ9 315 aaKnown RBP21.66■■□□□ 1.06
TSSC4-204ENST00000435795 PPIP5K1Q6PFW1 1433 aa21.65■■□□□ 1.06
TSSC4-204ENST00000435795 NINLQ9Y2I6 1382 aa21.62■■□□□ 1.05
TSSC4-204ENST00000435795 ACEP12821 1306 aa21.62■■□□□ 1.05
TSSC4-204ENST00000435795 FOXO3O43524 673 aa21.62■■□□□ 1.05
TSSC4-204ENST00000435795 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
TSSC4-204ENST00000435795 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
TSSC4-204ENST00000435795 USP32Q8NFA0 1604 aa21.6■■□□□ 1.05
TSSC4-204ENST00000435795 PSME1Q06323 249 aa21.6■■□□□ 1.05
TSSC4-204ENST00000435795 ZNF692Q9BU19 519 aaPredicted RBP21.59■■□□□ 1.05
TSSC4-204ENST00000435795 DDX17Q92841 729 aaKnown RBP21.58■■□□□ 1.05
TSSC4-204ENST00000435795 NPHP3Q7Z494 1330 aa21.57■■□□□ 1.04
TSSC4-204ENST00000435795 KRT28Q7Z3Y7 464 aa21.57■■□□□ 1.04
TSSC4-204ENST00000435795 PANK3Q9H999 370 aa21.57■■□□□ 1.04
TSSC4-204ENST00000435795 POLR3AO14802 1390 aaPredicted RBP21.57■■□□□ 1.04
TSSC4-204ENST00000435795 XPCQ01831 940 aaPredicted RBP21.56■■□□□ 1.04
TSSC4-204ENST00000435795 ANKRD36BQ8N2N9 1353 aa21.55■■□□□ 1.04
TSSC4-204ENST00000435795 KTN1Q86UP2 1357 aaKnown RBP21.53■■□□□ 1.04
TSSC4-204ENST00000435795 DDX10Q13206 875 aaKnown RBP21.53■■□□□ 1.04
TSSC4-204ENST00000435795 CPSF1Q10570 1443 aaKnown RBP21.53■■□□□ 1.04
TSSC4-204ENST00000435795 A0A1W2PP64 1363 aa21.52■■□□□ 1.04
TSSC4-204ENST00000435795 CD163L1Q9NR16 1453 aa21.52■■□□□ 1.03
TSSC4-204ENST00000435795 TOPAZ1Q8N9V7 1692 aa21.51■■□□□ 1.03
TSSC4-204ENST00000435795 PAK3O75914 559 aaPredicted RBP21.51■■□□□ 1.03
TSSC4-204ENST00000435795 CARD14Q9BXL6 1004 aa21.51■■□□□ 1.03
TSSC4-204ENST00000435795 SOS2Q07890 1332 aaPredicted RBP21.51■■□□□ 1.03
TSSC4-204ENST00000435795 RGPD8O14715 1765 aaPredicted RBP21.51■■□□□ 1.03
TSSC4-204ENST00000435795 ITSN1Q15811 1721 aa21.5■■□□□ 1.03
TSSC4-204ENST00000435795 KIF1AQ12756 1690 aa21.5■■□□□ 1.03
TSSC4-204ENST00000435795 ROBO1Q9Y6N7 1651 aa21.5■■□□□ 1.03
TSSC4-204ENST00000435795 USP6P35125 1406 aa21.49■■□□□ 1.03
TSSC4-204ENST00000435795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.48■■□□□ 1.03
TSSC4-204ENST00000435795 TTC21BQ7Z4L5 1316 aa21.48■■□□□ 1.03
TSSC4-204ENST00000435795 BRD4O60885 1362 aaPredicted RBP21.48■■□□□ 1.03
TSSC4-204ENST00000435795 LMOD2Q6P5Q4 547 aa21.46■■□□□ 1.03
TSSC4-204ENST00000435795 LRRC59Q96AG4 307 aaKnown RBP21.46■■□□□ 1.03
TSSC4-204ENST00000435795 KNSTRNQ9Y448 316 aa21.46■■□□□ 1.03
TSSC4-204ENST00000435795 SBNO1A3KN83 1393 aa21.46■■□□□ 1.03
TSSC4-204ENST00000435795 HSPA1LP34931 641 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms