RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
CPNE1-214ENST00000435747 R3HDM1Q15032 1099 aaKnown RBP16.29■□□□□ 0.2
CPNE1-214ENST00000435747 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
CPNE1-214ENST00000435747 KRT27Q7Z3Y8 459 aa16.27■□□□□ 0.2
CPNE1-214ENST00000435747 PTPN23Q9H3S7 1636 aa16.27■□□□□ 0.19
CPNE1-214ENST00000435747 METP08581 1390 aa16.26■□□□□ 0.19
CPNE1-214ENST00000435747 SLIT2O94813 1529 aa16.25■□□□□ 0.19
CPNE1-214ENST00000435747 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
CPNE1-214ENST00000435747 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
CPNE1-214ENST00000435747 EN1Q05925 392 aaPredicted RBP16.23■□□□□ 0.19
CPNE1-214ENST00000435747 SENP3-EIF4A1A0A087X0R7 540 aa16.22■□□□□ 0.19
CPNE1-214ENST00000435747 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
CPNE1-214ENST00000435747 CCDC9Q9Y3X0 531 aaKnown RBP16.21■□□□□ 0.19
CPNE1-214ENST00000435747 E9PCH4 1651 aa16.21■□□□□ 0.18
CPNE1-214ENST00000435747 PXDNQ92626 1479 aa16.2■□□□□ 0.18
CPNE1-214ENST00000435747 IQGAP3Q86VI3 1631 aa16.19■□□□□ 0.18
CPNE1-214ENST00000435747 A0A0G2JS52 829 aa16.19■□□□□ 0.18
CPNE1-214ENST00000435747 ONECUT3O60422 494 aaPredicted RBP16.19■□□□□ 0.18
CPNE1-214ENST00000435747 MYT1Q01538 1121 aa16.19■□□□□ 0.18
CPNE1-214ENST00000435747 VPS72Q15906 364 aa16.19■□□□□ 0.18
CPNE1-214ENST00000435747 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
CPNE1-214ENST00000435747 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
CPNE1-214ENST00000435747 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
CPNE1-214ENST00000435747 USP32Q8NFA0 1604 aa16.16■□□□□ 0.18
CPNE1-214ENST00000435747 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
CPNE1-214ENST00000435747 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
CPNE1-214ENST00000435747 FOXO3O43524 673 aa16.15■□□□□ 0.18
CPNE1-214ENST00000435747 LRPPRCP42704 1394 aaKnown RBP16.14■□□□□ 0.17
CPNE1-214ENST00000435747 NWD2Q9ULI1 1742 aa16.14■□□□□ 0.17
CPNE1-214ENST00000435747 DISP2A7MBM2 1401 aa16.14■□□□□ 0.17
CPNE1-214ENST00000435747 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
CPNE1-214ENST00000435747 PLCH1Q4KWH8 1693 aa16.14■□□□□ 0.17
CPNE1-214ENST00000435747 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
CPNE1-214ENST00000435747 EZH2Q15910 746 aaKnown RBP16.13■□□□□ 0.17
CPNE1-214ENST00000435747 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
CPNE1-214ENST00000435747 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
CPNE1-214ENST00000435747 ZNF784Q8NCA9 323 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-214ENST00000435747 NINLQ9Y2I6 1382 aa16.11■□□□□ 0.17
CPNE1-214ENST00000435747 FAM98CQ17RN3 349 aaKnown RBP16.1■□□□□ 0.17
CPNE1-214ENST00000435747 UTRNP46939 3433 aa16.09■□□□□ 0.17
CPNE1-214ENST00000435747 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
CPNE1-214ENST00000435747 HFM1A2PYH4 1435 aa16.09■□□□□ 0.17
CPNE1-214ENST00000435747 ADGRB2O60241 1585 aa16.09■□□□□ 0.17
CPNE1-214ENST00000435747 C1QTNF8P60827 252 aa16.08■□□□□ 0.16
CPNE1-214ENST00000435747 FAM182BQ5T319 152 aa16.08■□□□□ 0.16
CPNE1-214ENST00000435747 CDC42BPGQ6DT37 1551 aa16.08■□□□□ 0.16
CPNE1-214ENST00000435747 CAMTA1Q9Y6Y1 1673 aa16.08■□□□□ 0.16
CPNE1-214ENST00000435747 SPON1Q9HCB6 807 aa16.07■□□□□ 0.16
CPNE1-214ENST00000435747 APLP2Q06481 763 aa16.06■□□□□ 0.16
CPNE1-214ENST00000435747 CAMKK2Q96RR4 588 aa16.06■□□□□ 0.16
CPNE1-214ENST00000435747 CEP350Q5VT06 3117 aa16.06■□□□□ 0.16
CPNE1-214ENST00000435747 NEXMIFQ5QGS0 1516 aa16.05■□□□□ 0.16
CPNE1-214ENST00000435747 PRAG1Q86YV5 1406 aa16.04■□□□□ 0.16
CPNE1-214ENST00000435747 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
CPNE1-214ENST00000435747 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
CPNE1-214ENST00000435747 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
CPNE1-214ENST00000435747 NBPF8Q3BBV2 869 aa16.03■□□□□ 0.16
CPNE1-214ENST00000435747 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
CPNE1-214ENST00000435747 CABLES1Q8TDN4 633 aa16.03■□□□□ 0.16
CPNE1-214ENST00000435747 CHD4Q14839 1912 aa16.02■□□□□ 0.16
CPNE1-214ENST00000435747 NUTM2FA1L443 756 aa16.02■□□□□ 0.16
CPNE1-214ENST00000435747 KCNQ2O43526 872 aa16.02■□□□□ 0.16
CPNE1-214ENST00000435747 NRAPQ86VF7 1730 aa16.02■□□□□ 0.15
CPNE1-214ENST00000435747 KIF1AQ12756 1690 aa16.02■□□□□ 0.15
CPNE1-214ENST00000435747 TRIM37O94972 964 aa16.01■□□□□ 0.15
CPNE1-214ENST00000435747 APBA3O96018 575 aa16.01■□□□□ 0.15
CPNE1-214ENST00000435747 KRT28Q7Z3Y7 464 aa16.01■□□□□ 0.15
CPNE1-214ENST00000435747 NUP188Q5SRE5 1749 aa16.01■□□□□ 0.15
CPNE1-214ENST00000435747 ABCA3Q99758 1704 aa16.01■□□□□ 0.15
CPNE1-214ENST00000435747 RREB1Q92766 1687 aa16.01■□□□□ 0.15
CPNE1-214ENST00000435747 TNS3Q68CZ2 1445 aa16■□□□□ 0.15
CPNE1-214ENST00000435747 FAM83GA6ND36 823 aa15.99■□□□□ 0.15
CPNE1-214ENST00000435747 NAIPQ13075 1403 aa15.99■□□□□ 0.15
CPNE1-214ENST00000435747 NUP155O75694 1391 aa15.99■□□□□ 0.15
CPNE1-214ENST00000435747 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
CPNE1-214ENST00000435747 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
CPNE1-214ENST00000435747 BTG4Q9NY30 223 aa15.97■□□□□ 0.15
CPNE1-214ENST00000435747 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
CPNE1-214ENST00000435747 KIF1BO60333 1816 aa15.96■□□□□ 0.15
CPNE1-214ENST00000435747 PSME1Q06323 249 aa15.96■□□□□ 0.15
CPNE1-214ENST00000435747 LMOD2Q6P5Q4 547 aa15.96■□□□□ 0.15
CPNE1-214ENST00000435747 VGFO15240 615 aaPredicted RBP15.95■□□□□ 0.14
CPNE1-214ENST00000435747 SPATA31A5Q5VU36 1347 aa15.94■□□□□ 0.14
CPNE1-214ENST00000435747 SPATA31A7Q8IWB4 1347 aa15.94■□□□□ 0.14
CPNE1-214ENST00000435747 CLTCL1P53675 1640 aa15.94■□□□□ 0.14
CPNE1-214ENST00000435747 ARHGEF10O15013 1369 aa15.94■□□□□ 0.14
CPNE1-214ENST00000435747 FMN2Q9NZ56 1722 aa15.94■□□□□ 0.14
CPNE1-214ENST00000435747 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
CPNE1-214ENST00000435747 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
CPNE1-214ENST00000435747 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
CPNE1-214ENST00000435747 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-214ENST00000435747 RGPD8O14715 1765 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-214ENST00000435747 WAPLQ7Z5K2 1190 aa15.89■□□□□ 0.13
CPNE1-214ENST00000435747 PHF8Q9UPP1 1060 aa15.89■□□□□ 0.13
CPNE1-214ENST00000435747 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
CPNE1-214ENST00000435747 MYOM1P52179 1685 aa15.86■□□□□ 0.13
CPNE1-214ENST00000435747 STK26Q9P289 416 aa15.86■□□□□ 0.13
CPNE1-214ENST00000435747 ROCK1Q13464 1354 aa15.86■□□□□ 0.13
CPNE1-214ENST00000435747 CASZ1Q86V15 1759 aa15.85■□□□□ 0.13
CPNE1-214ENST00000435747 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms