RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 CADPS2Q86UW7 1296 aa23.21■■□□□ 1.31
CTDSPL-204ENST00000435525 PLEKHH1Q9ULM0 1364 aa23.21■■□□□ 1.31
CTDSPL-204ENST00000435525 ADGRL3Q9HAR2 1447 aa23.21■■□□□ 1.31
CTDSPL-204ENST00000435525 IQSEC2Q5JU85 1478 aa23.21■■□□□ 1.31
CTDSPL-204ENST00000435525 MINK1Q8N4C8 1332 aaPredicted RBP23.2■■□□□ 1.3
CTDSPL-204ENST00000435525 STRCP1A6NGW2 1772 aa23.19■■□□□ 1.3
CTDSPL-204ENST00000435525 ST20-MTHFSA0A0A6YYL1 179 aa23.18■■□□□ 1.3
CTDSPL-204ENST00000435525 DCCP43146 1447 aa23.17■■□□□ 1.3
CTDSPL-204ENST00000435525 EVC2Q86UK5 1308 aa23.16■■□□□ 1.3
CTDSPL-204ENST00000435525 TOM1O60784 492 aa23.16■■□□□ 1.3
CTDSPL-204ENST00000435525 SBNO2Q9Y2G9 1366 aa23.15■■□□□ 1.3
CTDSPL-204ENST00000435525 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
CTDSPL-204ENST00000435525 ARHGEF28Q8N1W1 1705 aaKnown RBP23.15■■□□□ 1.3
CTDSPL-204ENST00000435525 HSPA5P11021 654 aaKnown RBP23.14■■□□□ 1.29
CTDSPL-204ENST00000435525 WASLO00401 505 aaPredicted RBP23.13■■□□□ 1.29
CTDSPL-204ENST00000435525 TMF1P82094 1093 aa23.13■■□□□ 1.29
CTDSPL-204ENST00000435525 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
CTDSPL-204ENST00000435525 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
CTDSPL-204ENST00000435525 SRPK2P78362 688 aaKnown RBP23.11■■□□□ 1.29
CTDSPL-204ENST00000435525 CDK19Q9BWU1 502 aa23.09■■□□□ 1.29
CTDSPL-204ENST00000435525 CDC42BPGQ6DT37 1551 aa23.09■■□□□ 1.29
CTDSPL-204ENST00000435525 ADGRB2O60241 1585 aa23.07■■□□□ 1.28
CTDSPL-204ENST00000435525 TESK2Q96S53 571 aa23.07■■□□□ 1.28
CTDSPL-204ENST00000435525 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
CTDSPL-204ENST00000435525 QRICH2Q9H0J4 1663 aa23.06■■□□□ 1.28
CTDSPL-204ENST00000435525 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.05■■□□□ 1.28
CTDSPL-204ENST00000435525 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
CTDSPL-204ENST00000435525 NALCNQ8IZF0 1738 aa23.05■■□□□ 1.28
CTDSPL-204ENST00000435525 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
CTDSPL-204ENST00000435525 NUTM2FA1L443 756 aa23.03■■□□□ 1.28
CTDSPL-204ENST00000435525 SCAF1Q9H7N4 1312 aaKnown RBP23.03■■□□□ 1.28
CTDSPL-204ENST00000435525 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
CTDSPL-204ENST00000435525 NUDT16Q96DE0 195 aaKnown RBP23.02■■□□□ 1.28
CTDSPL-204ENST00000435525 CABP2Q9NPB3 220 aa23.02■■□□□ 1.28
CTDSPL-204ENST00000435525 ESCO1Q5FWF5 840 aa23.01■■□□□ 1.27
CTDSPL-204ENST00000435525 CCDC61Q9Y6R9 512 aa23.01■■□□□ 1.27
CTDSPL-204ENST00000435525 XIRP1Q702N8 1843 aaKnown RBP23.01■■□□□ 1.27
CTDSPL-204ENST00000435525 MST1RQ04912 1400 aa23■■□□□ 1.27
CTDSPL-204ENST00000435525 TULP4Q9NRJ4 1543 aa23■■□□□ 1.27
CTDSPL-204ENST00000435525 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
CTDSPL-204ENST00000435525 PIP4K2BP78356 416 aa22.99■■□□□ 1.27
CTDSPL-204ENST00000435525 POLR3GLQ9BT43 218 aa22.96■■□□□ 1.27
CTDSPL-204ENST00000435525 PHF8Q9UPP1 1060 aa22.96■■□□□ 1.27
CTDSPL-204ENST00000435525 DISP3Q9P2K9 1392 aa22.95■■□□□ 1.26
CTDSPL-204ENST00000435525 FMN2Q9NZ56 1722 aa22.94■■□□□ 1.26
CTDSPL-204ENST00000435525 NINLQ9Y2I6 1382 aa22.94■■□□□ 1.26
CTDSPL-204ENST00000435525 TMC1Q8TDI8 760 aa22.94■■□□□ 1.26
CTDSPL-204ENST00000435525 PRR36Q9H6K5 1346 aa22.93■■□□□ 1.26
CTDSPL-204ENST00000435525 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
CTDSPL-204ENST00000435525 NGDNQ8NEJ9 315 aaKnown RBP22.93■■□□□ 1.26
CTDSPL-204ENST00000435525 ORAI2Q96SN7 254 aa22.93■■□□□ 1.26
CTDSPL-204ENST00000435525 ATP7BP35670 1465 aa22.92■■□□□ 1.26
CTDSPL-204ENST00000435525 PPIP5K1Q6PFW1 1433 aa22.91■■□□□ 1.26
CTDSPL-204ENST00000435525 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
CTDSPL-204ENST00000435525 PLEKHG3A1L390 1219 aa22.9■■□□□ 1.26
CTDSPL-204ENST00000435525 FBXO41Q8TF61 875 aa22.9■■□□□ 1.26
CTDSPL-204ENST00000435525 TERF2IPQ9NYB0 399 aa22.9■■□□□ 1.26
CTDSPL-204ENST00000435525 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
CTDSPL-204ENST00000435525 HDGFL2Q7Z4V5 671 aaPredicted RBP22.89■■□□□ 1.25
CTDSPL-204ENST00000435525 PMFBP1Q8TBY8 1022 aa22.89■■□□□ 1.25
CTDSPL-204ENST00000435525 PSME1Q06323 249 aa22.88■■□□□ 1.25
CTDSPL-204ENST00000435525 ZNF692Q9BU19 519 aaPredicted RBP22.88■■□□□ 1.25
CTDSPL-204ENST00000435525 FOXO3O43524 673 aa22.86■■□□□ 1.25
CTDSPL-204ENST00000435525 ACEP12821 1306 aa22.84■■□□□ 1.25
CTDSPL-204ENST00000435525 KIF7Q2M1P5 1343 aa22.84■■□□□ 1.25
CTDSPL-204ENST00000435525 KIF1AQ12756 1690 aa22.84■■□□□ 1.25
CTDSPL-204ENST00000435525 ITSN1Q15811 1721 aa22.83■■□□□ 1.25
CTDSPL-204ENST00000435525 SLC12A5Q9H2X9 1139 aa22.83■■□□□ 1.25
CTDSPL-204ENST00000435525 CCDC7Q96M83 1385 aa22.83■■□□□ 1.25
CTDSPL-204ENST00000435525 POLR3AO14802 1390 aaPredicted RBP22.82■■□□□ 1.24
CTDSPL-204ENST00000435525 USP32Q8NFA0 1604 aa22.82■■□□□ 1.24
CTDSPL-204ENST00000435525 BRD4O60885 1362 aaPredicted RBP22.81■■□□□ 1.24
CTDSPL-204ENST00000435525 C11orf95C9JLR9 678 aaPredicted RBP22.81■■□□□ 1.24
CTDSPL-204ENST00000435525 KRT28Q7Z3Y7 464 aa22.81■■□□□ 1.24
CTDSPL-204ENST00000435525 ROBO1Q9Y6N7 1651 aa22.81■■□□□ 1.24
CTDSPL-204ENST00000435525 ZNF316A6NFI3 1004 aaPredicted RBP22.8■■□□□ 1.24
CTDSPL-204ENST00000435525 WASHC2AQ641Q2 1341 aa22.79■■□□□ 1.24
CTDSPL-204ENST00000435525 KTN1Q86UP2 1357 aaKnown RBP22.78■■□□□ 1.24
CTDSPL-204ENST00000435525 ANKRD36BQ8N2N9 1353 aa22.78■■□□□ 1.24
CTDSPL-204ENST00000435525 LRRC59Q96AG4 307 aaKnown RBP22.78■■□□□ 1.24
CTDSPL-204ENST00000435525 TOPAZ1Q8N9V7 1692 aa22.77■■□□□ 1.24
CTDSPL-204ENST00000435525 PAK3O75914 559 aaPredicted RBP22.77■■□□□ 1.24
CTDSPL-204ENST00000435525 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
CTDSPL-204ENST00000435525 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
CTDSPL-204ENST00000435525 DDX17Q92841 729 aaKnown RBP22.75■■□□□ 1.23
CTDSPL-204ENST00000435525 SBNO1A3KN83 1393 aa22.75■■□□□ 1.23
CTDSPL-204ENST00000435525 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
CTDSPL-204ENST00000435525 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
CTDSPL-204ENST00000435525 LMOD2Q6P5Q4 547 aa22.73■■□□□ 1.23
CTDSPL-204ENST00000435525 A0A1W2PP64 1363 aa22.73■■□□□ 1.23
CTDSPL-204ENST00000435525 USP6P35125 1406 aa22.73■■□□□ 1.23
CTDSPL-204ENST00000435525 HSPA1LP34931 641 aa22.72■■□□□ 1.23
CTDSPL-204ENST00000435525 PANK3Q9H999 370 aa22.72■■□□□ 1.23
CTDSPL-204ENST00000435525 TTC21AQ8NDW8 1320 aa22.72■■□□□ 1.23
CTDSPL-204ENST00000435525 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
CTDSPL-204ENST00000435525 ARHGEF10O15013 1369 aa22.71■■□□□ 1.23
CTDSPL-204ENST00000435525 EDC4Q6P2E9 1401 aaKnown RBP22.71■■□□□ 1.23
CTDSPL-204ENST00000435525 NHSL1Q5SYE7 1610 aa22.69■■□□□ 1.22
CTDSPL-204ENST00000435525 PXDNQ92626 1479 aa22.69■■□□□ 1.22
CTDSPL-204ENST00000435525 SPATA31A3Q5VYP0 1347 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms