RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 AFF2P51816 1311 aa19.43■□□□□ 0.7
CDCA4P4-201ENST00000435216 NUTM2FA1L443 756 aa19.42■□□□□ 0.7
CDCA4P4-201ENST00000435216 C8orf37Q96NL8 207 aa19.42■□□□□ 0.7
CDCA4P4-201ENST00000435216 LRPPRCP42704 1394 aaKnown RBP19.42■□□□□ 0.7
CDCA4P4-201ENST00000435216 PLEKHH1Q9ULM0 1364 aa19.42■□□□□ 0.7
CDCA4P4-201ENST00000435216 TECPR2O15040 1411 aa19.41■□□□□ 0.7
CDCA4P4-201ENST00000435216 KNDC1Q76NI1 1749 aa19.4■□□□□ 0.7
CDCA4P4-201ENST00000435216 ESCO1Q5FWF5 840 aa19.4■□□□□ 0.7
CDCA4P4-201ENST00000435216 SOS2Q07890 1332 aaPredicted RBP19.4■□□□□ 0.7
CDCA4P4-201ENST00000435216 ADAMTS2O95450 1211 aa19.39■□□□□ 0.69
CDCA4P4-201ENST00000435216 RXRBP28702 533 aa19.38■□□□□ 0.69
CDCA4P4-201ENST00000435216 ABCC11Q96J66 1382 aa19.38■□□□□ 0.69
CDCA4P4-201ENST00000435216 YTHDC2Q9H6S0 1430 aaKnown RBP19.38■□□□□ 0.69
CDCA4P4-201ENST00000435216 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
CDCA4P4-201ENST00000435216 ACIN1Q9UKV3 1341 aaKnown RBP19.36■□□□□ 0.69
CDCA4P4-201ENST00000435216 CFAP70Q5T0N1 1121 aa19.36■□□□□ 0.69
CDCA4P4-201ENST00000435216 FOXO3O43524 673 aa19.35■□□□□ 0.69
CDCA4P4-201ENST00000435216 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
CDCA4P4-201ENST00000435216 NRXN1Q9ULB1 1477 aa19.35■□□□□ 0.69
CDCA4P4-201ENST00000435216 NGLY1Q96IV0 654 aa19.34■□□□□ 0.69
CDCA4P4-201ENST00000435216 MYOM2P54296 1465 aa19.34■□□□□ 0.69
CDCA4P4-201ENST00000435216 PXDNQ92626 1479 aa19.34■□□□□ 0.69
CDCA4P4-201ENST00000435216 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
CDCA4P4-201ENST00000435216 NPHP3Q7Z494 1330 aa19.33■□□□□ 0.69
CDCA4P4-201ENST00000435216 QTRT2Q9H974 415 aaKnown RBP19.33■□□□□ 0.68
CDCA4P4-201ENST00000435216 SAFB2Q14151 953 aaKnown RBP eCLIP19.32■□□□□ 0.684e-6■■■□□ 19.2
CDCA4P4-201ENST00000435216 COL22A1Q8NFW1 1626 aaPredicted RBP19.32■□□□□ 0.68
CDCA4P4-201ENST00000435216 DHX57Q6P158 1386 aaKnown RBP19.3■□□□□ 0.68
CDCA4P4-201ENST00000435216 RGPD8O14715 1765 aaPredicted RBP19.29■□□□□ 0.68
CDCA4P4-201ENST00000435216 UPF1Q92900 1129 aaKnown RBP eCLIP19.29■□□□□ 0.68
CDCA4P4-201ENST00000435216 CDK12Q9NYV4 1490 aaPredicted RBP19.28■□□□□ 0.68
CDCA4P4-201ENST00000435216 RGS12O14924 1447 aa19.28■□□□□ 0.68
CDCA4P4-201ENST00000435216 PRAM1Q96QH2 718 aa19.28■□□□□ 0.68
CDCA4P4-201ENST00000435216 KDM2AQ9Y2K7 1162 aa19.28■□□□□ 0.68
CDCA4P4-201ENST00000435216 RBM6P78332 1123 aaKnown RBP19.27■□□□□ 0.68
CDCA4P4-201ENST00000435216 USP21Q9UK80 565 aa19.27■□□□□ 0.68
CDCA4P4-201ENST00000435216 SIRT1Q96EB6 747 aa19.26■□□□□ 0.67
CDCA4P4-201ENST00000435216 KIF1AQ12756 1690 aa19.26■□□□□ 0.67
CDCA4P4-201ENST00000435216 DCAF11Q8TEB1 546 aa19.25■□□□□ 0.67
CDCA4P4-201ENST00000435216 ADGRB1O14514 1584 aa19.24■□□□□ 0.67
CDCA4P4-201ENST00000435216 POGKQ9P215 609 aa19.24■□□□□ 0.67
CDCA4P4-201ENST00000435216 MARF1Q9Y4F3 1742 aaKnown RBP19.24■□□□□ 0.67
CDCA4P4-201ENST00000435216 FNBP4Q8N3X1 1017 aaPredicted RBP19.23■□□□□ 0.67
CDCA4P4-201ENST00000435216 TRAK1Q9UPV9 953 aa19.23■□□□□ 0.67
CDCA4P4-201ENST00000435216 DLC1Q96QB1 1528 aa19.22■□□□□ 0.67
CDCA4P4-201ENST00000435216 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
CDCA4P4-201ENST00000435216 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
CDCA4P4-201ENST00000435216 SPATA31A3Q5VYP0 1347 aa19.22■□□□□ 0.67
CDCA4P4-201ENST00000435216 HIRIP3Q9BW71 556 aaPredicted RBP19.21■□□□□ 0.67
CDCA4P4-201ENST00000435216 PHF8Q9UPP1 1060 aa19.21■□□□□ 0.67
CDCA4P4-201ENST00000435216 USP32Q8NFA0 1604 aa19.21■□□□□ 0.67
CDCA4P4-201ENST00000435216 TRPC5Q9UL62 973 aaPredicted RBP19.2■□□□□ 0.66
CDCA4P4-201ENST00000435216 ATRNO75882 1429 aa19.19■□□□□ 0.66
CDCA4P4-201ENST00000435216 BCL9LQ86UU0 1499 aa19.18■□□□□ 0.66
CDCA4P4-201ENST00000435216 PMFBP1Q8TBY8 1022 aa19.18■□□□□ 0.66
CDCA4P4-201ENST00000435216 MINK1Q8N4C8 1332 aaPredicted RBP19.18■□□□□ 0.66
CDCA4P4-201ENST00000435216 HRCP23327 699 aa19.17■□□□□ 0.66
CDCA4P4-201ENST00000435216 CABLES1Q8TDN4 633 aa19.17■□□□□ 0.66
CDCA4P4-201ENST00000435216 ADGRB2O60241 1585 aa19.17■□□□□ 0.66
CDCA4P4-201ENST00000435216 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
CDCA4P4-201ENST00000435216 LMOD2Q6P5Q4 547 aa19.16■□□□□ 0.66
CDCA4P4-201ENST00000435216 PSME1Q06323 249 aa19.15■□□□□ 0.66
CDCA4P4-201ENST00000435216 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
CDCA4P4-201ENST00000435216 PRR36Q9H6K5 1346 aa19.13■□□□□ 0.65
CDCA4P4-201ENST00000435216 ANKARQ7Z5J8 1434 aa19.13■□□□□ 0.65
CDCA4P4-201ENST00000435216 ARHGEF28Q8N1W1 1705 aaKnown RBP19.12■□□□□ 0.65
CDCA4P4-201ENST00000435216 ABCA3Q99758 1704 aa19.12■□□□□ 0.65
CDCA4P4-201ENST00000435216 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.11■□□□□ 0.65
CDCA4P4-201ENST00000435216 SLIT2O94813 1529 aa19.11■□□□□ 0.65
CDCA4P4-201ENST00000435216 SBNO1A3KN83 1393 aa19.1■□□□□ 0.65
CDCA4P4-201ENST00000435216 GJD4Q96KN9 370 aaPredicted RBP19.1■□□□□ 0.65
CDCA4P4-201ENST00000435216 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
CDCA4P4-201ENST00000435216 ATAD2Q6PL18 1390 aa19.09■□□□□ 0.65
CDCA4P4-201ENST00000435216 TRPM3Q9HCF6 1732 aaPredicted RBP19.09■□□□□ 0.65
CDCA4P4-201ENST00000435216 WASLO00401 505 aaPredicted RBP19.09■□□□□ 0.65
CDCA4P4-201ENST00000435216 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
CDCA4P4-201ENST00000435216 STAC3Q96MF2 364 aa19.09■□□□□ 0.65
CDCA4P4-201ENST00000435216 GLI3P10071 1580 aa19.09■□□□□ 0.65
CDCA4P4-201ENST00000435216 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.65
CDCA4P4-201ENST00000435216 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.64
CDCA4P4-201ENST00000435216 ARHGEF10O15013 1369 aa19.07■□□□□ 0.64
CDCA4P4-201ENST00000435216 EIF3AQ14152 1382 aaKnown RBP19.06■□□□□ 0.64
CDCA4P4-201ENST00000435216 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
CDCA4P4-201ENST00000435216 EP400Q96L91 3159 aa19.05■□□□□ 0.64
CDCA4P4-201ENST00000435216 GPRASP1Q5JY77 1395 aa19.05■□□□□ 0.64
CDCA4P4-201ENST00000435216 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
CDCA4P4-201ENST00000435216 ATP7BP35670 1465 aa19.03■□□□□ 0.64
CDCA4P4-201ENST00000435216 NBPF1Q3BBV0 1214 aa19.03■□□□□ 0.64
CDCA4P4-201ENST00000435216 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
CDCA4P4-201ENST00000435216 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
CDCA4P4-201ENST00000435216 PAK3O75914 559 aaPredicted RBP19.02■□□□□ 0.64
CDCA4P4-201ENST00000435216 NUDT16Q96DE0 195 aaKnown RBP19.02■□□□□ 0.64
CDCA4P4-201ENST00000435216 CCDC9Q9Y3X0 531 aaKnown RBP19.02■□□□□ 0.64
CDCA4P4-201ENST00000435216 ITSN1Q15811 1721 aa19.02■□□□□ 0.63
CDCA4P4-201ENST00000435216 KIAA1210Q9ULL0 1709 aa19.02■□□□□ 0.63
CDCA4P4-201ENST00000435216 BRWD3Q6RI45 1802 aa19.02■□□□□ 0.63
CDCA4P4-201ENST00000435216 VPS72Q15906 364 aa19■□□□□ 0.63
CDCA4P4-201ENST00000435216 CDK19Q9BWU1 502 aa19■□□□□ 0.63
CDCA4P4-201ENST00000435216 CRYBG1Q9Y4K1 1723 aa18.99■□□□□ 0.63
CDCA4P4-201ENST00000435216 NRAPQ86VF7 1730 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms