RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 PRAG1Q86YV5 1406 aa20.02■□□□□ 0.79
CDC42EP1-204ENST00000434728 NPHP3Q7Z494 1330 aa20.02■□□□□ 0.79
CDC42EP1-204ENST00000434728 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
CDC42EP1-204ENST00000434728 STK26Q9P289 416 aa20.01■□□□□ 0.79
CDC42EP1-204ENST00000434728 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
CDC42EP1-204ENST00000434728 TRPC5Q9UL62 973 aaPredicted RBP19.99■□□□□ 0.79
CDC42EP1-204ENST00000434728 NUTM2FA1L443 756 aa19.97■□□□□ 0.79
CDC42EP1-204ENST00000434728 ADGRF5Q8IZF2 1346 aa19.97■□□□□ 0.79
CDC42EP1-204ENST00000434728 LRPPRCP42704 1394 aaKnown RBP19.96■□□□□ 0.79
CDC42EP1-204ENST00000434728 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
CDC42EP1-204ENST00000434728 ANKRD30BQ9BXX2 1392 aa19.96■□□□□ 0.79
CDC42EP1-204ENST00000434728 XPCQ01831 940 aaPredicted RBP19.96■□□□□ 0.79
CDC42EP1-204ENST00000434728 COL22A1Q8NFW1 1626 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP1-204ENST00000434728 FOXO3O43524 673 aa19.95■□□□□ 0.78
CDC42EP1-204ENST00000434728 WAPLQ7Z5K2 1190 aa19.93■□□□□ 0.78
CDC42EP1-204ENST00000434728 FNBP4Q8N3X1 1017 aaPredicted RBP19.92■□□□□ 0.78
CDC42EP1-204ENST00000434728 IFT172Q9UG01 1749 aa19.92■□□□□ 0.78
CDC42EP1-204ENST00000434728 PXDNQ92626 1479 aa19.92■□□□□ 0.78
CDC42EP1-204ENST00000434728 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
CDC42EP1-204ENST00000434728 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
CDC42EP1-204ENST00000434728 MYOM2P54296 1465 aa19.91■□□□□ 0.78
CDC42EP1-204ENST00000434728 KNDC1Q76NI1 1749 aa19.9■□□□□ 0.78
CDC42EP1-204ENST00000434728 MARF1Q9Y4F3 1742 aaKnown RBP19.9■□□□□ 0.78
CDC42EP1-204ENST00000434728 TECPR2O15040 1411 aa19.9■□□□□ 0.78
CDC42EP1-204ENST00000434728 ATRNO75882 1429 aa19.9■□□□□ 0.78
CDC42EP1-204ENST00000434728 SPATA31E1Q6ZUB1 1445 aa19.9■□□□□ 0.78
CDC42EP1-204ENST00000434728 HAP1P54257 671 aaPredicted RBP19.89■□□□□ 0.77
CDC42EP1-204ENST00000434728 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
CDC42EP1-204ENST00000434728 KIF1AQ12756 1690 aa19.87■□□□□ 0.77
CDC42EP1-204ENST00000434728 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
CDC42EP1-204ENST00000434728 FMN2Q9NZ56 1722 aa19.87■□□□□ 0.77
CDC42EP1-204ENST00000434728 YTHDC2Q9H6S0 1430 aaKnown RBP19.86■□□□□ 0.77
CDC42EP1-204ENST00000434728 PLEKHH1Q9ULM0 1364 aa19.86■□□□□ 0.77
CDC42EP1-204ENST00000434728 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
CDC42EP1-204ENST00000434728 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
CDC42EP1-204ENST00000434728 GJD4Q96KN9 370 aaPredicted RBP19.83■□□□□ 0.77
CDC42EP1-204ENST00000434728 BCL9LQ86UU0 1499 aa19.83■□□□□ 0.76
CDC42EP1-204ENST00000434728 EP400Q96L91 3159 aa19.83■□□□□ 0.76
CDC42EP1-204ENST00000434728 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.76
CDC42EP1-204ENST00000434728 PSME1Q06323 249 aa19.82■□□□□ 0.76
CDC42EP1-204ENST00000434728 LMOD2Q6P5Q4 547 aa19.82■□□□□ 0.76
CDC42EP1-204ENST00000434728 KRT28Q7Z3Y7 464 aa19.82■□□□□ 0.76
CDC42EP1-204ENST00000434728 SPATA31A3Q5VYP0 1347 aa19.81■□□□□ 0.76
CDC42EP1-204ENST00000434728 SAFB2Q14151 953 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDC42EP1-204ENST00000434728 ZRANB1Q9UGI0 708 aa19.81■□□□□ 0.76
CDC42EP1-204ENST00000434728 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.81■□□□□ 0.76
CDC42EP1-204ENST00000434728 UNC5CLQ8IV45 518 aa19.8■□□□□ 0.76
CDC42EP1-204ENST00000434728 RGPD8O14715 1765 aaPredicted RBP19.8■□□□□ 0.76
CDC42EP1-204ENST00000434728 CCDC125Q86Z20 511 aa19.79■□□□□ 0.76
CDC42EP1-204ENST00000434728 POGKQ9P215 609 aa19.79■□□□□ 0.76
CDC42EP1-204ENST00000434728 PHF8Q9UPP1 1060 aa19.79■□□□□ 0.76
CDC42EP1-204ENST00000434728 USP32Q8NFA0 1604 aa19.79■□□□□ 0.76
CDC42EP1-204ENST00000434728 SRCAPQ6ZRS2 3230 aa19.78■□□□□ 0.76
CDC42EP1-204ENST00000434728 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
CDC42EP1-204ENST00000434728 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
CDC42EP1-204ENST00000434728 CCDC9Q9Y3X0 531 aaKnown RBP19.78■□□□□ 0.76
CDC42EP1-204ENST00000434728 TNS3Q68CZ2 1445 aa19.77■□□□□ 0.76
CDC42EP1-204ENST00000434728 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
CDC42EP1-204ENST00000434728 PRAM1Q96QH2 718 aa19.77■□□□□ 0.76
CDC42EP1-204ENST00000434728 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
CDC42EP1-204ENST00000434728 SLIT2O94813 1529 aa19.75■□□□□ 0.75
CDC42EP1-204ENST00000434728 ARHGEF10O15013 1369 aa19.74■□□□□ 0.75
CDC42EP1-204ENST00000434728 SF3B2Q13435 895 aaKnown RBP19.74■□□□□ 0.75
CDC42EP1-204ENST00000434728 A0A0G2JS52 829 aa19.73■□□□□ 0.75
CDC42EP1-204ENST00000434728 MYT1Q01538 1121 aa19.73■□□□□ 0.75
CDC42EP1-204ENST00000434728 CABLES1Q8TDN4 633 aa19.73■□□□□ 0.75
CDC42EP1-204ENST00000434728 GLI3P10071 1580 aa19.73■□□□□ 0.75
CDC42EP1-204ENST00000434728 NRXN1Q9ULB1 1477 aa19.73■□□□□ 0.75
CDC42EP1-204ENST00000434728 PLCH1Q4KWH8 1693 aa19.72■□□□□ 0.75
CDC42EP1-204ENST00000434728 PMFBP1Q8TBY8 1022 aa19.71■□□□□ 0.75
CDC42EP1-204ENST00000434728 SBNO1A3KN83 1393 aa19.7■□□□□ 0.74
CDC42EP1-204ENST00000434728 NWD2Q9ULI1 1742 aa19.7■□□□□ 0.74
CDC42EP1-204ENST00000434728 BRWD3Q6RI45 1802 aa19.69■□□□□ 0.74
CDC42EP1-204ENST00000434728 BLMP54132 1417 aaPredicted RBP19.69■□□□□ 0.74
CDC42EP1-204ENST00000434728 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
CDC42EP1-204ENST00000434728 ABCA3Q99758 1704 aa19.69■□□□□ 0.74
CDC42EP1-204ENST00000434728 SEPT12Q8IYM1 358 aa19.69■□□□□ 0.74
CDC42EP1-204ENST00000434728 DLC1Q96QB1 1528 aa19.69■□□□□ 0.74
CDC42EP1-204ENST00000434728 VPS72Q15906 364 aa19.68■□□□□ 0.74
CDC42EP1-204ENST00000434728 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
CDC42EP1-204ENST00000434728 TRAK1Q9UPV9 953 aa19.68■□□□□ 0.74
CDC42EP1-204ENST00000434728 EIF3AQ14152 1382 aaKnown RBP19.68■□□□□ 0.74
CDC42EP1-204ENST00000434728 GPRASP1Q5JY77 1395 aa19.68■□□□□ 0.74
CDC42EP1-204ENST00000434728 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
CDC42EP1-204ENST00000434728 KDM2AQ9Y2K7 1162 aa19.67■□□□□ 0.74
CDC42EP1-204ENST00000434728 MINK1Q8N4C8 1332 aaPredicted RBP19.66■□□□□ 0.74
CDC42EP1-204ENST00000434728 ADGRB2O60241 1585 aa19.66■□□□□ 0.74
CDC42EP1-204ENST00000434728 KRT27Q7Z3Y8 459 aa19.64■□□□□ 0.73
CDC42EP1-204ENST00000434728 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
CDC42EP1-204ENST00000434728 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
CDC42EP1-204ENST00000434728 DEFB132Q7Z7B7 95 aa19.62■□□□□ 0.73
CDC42EP1-204ENST00000434728 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
CDC42EP1-204ENST00000434728 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
CDC42EP1-204ENST00000434728 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
CDC42EP1-204ENST00000434728 BTG4Q9NY30 223 aa19.61■□□□□ 0.73
CDC42EP1-204ENST00000434728 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
CDC42EP1-204ENST00000434728 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP1-204ENST00000434728 FAM98CQ17RN3 349 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-204ENST00000434728 COL14A1Q05707 1796 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-204ENST00000434728 WASLO00401 505 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms