RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
CDC42EP1-204ENST00000434728 ABCC9O60706 1549 aa30.33■■■□□ 2.45
CDC42EP1-204ENST00000434728 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
CDC42EP1-204ENST00000434728 RB1CC1Q8TDY2 1594 aa28.83■■■□□ 2.21
CDC42EP1-204ENST00000434728 NACADO15069 1562 aa28.56■■■□□ 2.16
CDC42EP1-204ENST00000434728 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
CDC42EP1-204ENST00000434728 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
CDC42EP1-204ENST00000434728 PABPN1Q86U42 306 aaKnown RBP eCLIP28.21■■■□□ 2.11
CDC42EP1-204ENST00000434728 UNC13AQ9UPW8 1703 aa28.14■■■□□ 2.1
CDC42EP1-204ENST00000434728 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
CDC42EP1-204ENST00000434728 BICRAQ9NZM4 1560 aa27.89■■■□□ 2.05
CDC42EP1-204ENST00000434728 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.03
CDC42EP1-204ENST00000434728 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
CDC42EP1-204ENST00000434728 SHROOM4Q9ULL8 1493 aa27.56■■■□□ 2
CDC42EP1-204ENST00000434728 SCRIBQ14160 1630 aa27.55■■■□□ 2
CDC42EP1-204ENST00000434728 CC2D2AQ9P2K1 1620 aa27.38■■□□□ 1.97
CDC42EP1-204ENST00000434728 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
CDC42EP1-204ENST00000434728 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
CDC42EP1-204ENST00000434728 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
CDC42EP1-204ENST00000434728 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
CDC42EP1-204ENST00000434728 DNAJC5Q9H3Z4 198 aa26.27■■□□□ 1.8
CDC42EP1-204ENST00000434728 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
CDC42EP1-204ENST00000434728 SMARCA2P51531 1590 aa26.23■■□□□ 1.79
CDC42EP1-204ENST00000434728 SMARCA4P51532 1647 aa26.21■■□□□ 1.79
CDC42EP1-204ENST00000434728 CUX2O14529 1486 aa26.18■■□□□ 1.78
CDC42EP1-204ENST00000434728 HMGXB3Q12766 1538 aa26.16■■□□□ 1.78
CDC42EP1-204ENST00000434728 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
CDC42EP1-204ENST00000434728 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
CDC42EP1-204ENST00000434728 NESP48681 1621 aa25.99■■□□□ 1.75
CDC42EP1-204ENST00000434728 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
CDC42EP1-204ENST00000434728 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
CDC42EP1-204ENST00000434728 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
CDC42EP1-204ENST00000434728 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
CDC42EP1-204ENST00000434728 KIF21AQ7Z4S6 1674 aa25.69■■□□□ 1.7
CDC42EP1-204ENST00000434728 PDS5BQ9NTI5 1447 aa25.69■■□□□ 1.7
CDC42EP1-204ENST00000434728 WIZO95785 1651 aa25.55■■□□□ 1.68
CDC42EP1-204ENST00000434728 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
CDC42EP1-204ENST00000434728 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
CDC42EP1-204ENST00000434728 WDR62O43379 1518 aa25.37■■□□□ 1.65
CDC42EP1-204ENST00000434728 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
CDC42EP1-204ENST00000434728 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
CDC42EP1-204ENST00000434728 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
CDC42EP1-204ENST00000434728 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
CDC42EP1-204ENST00000434728 CFTRP13569 1480 aa25.21■■□□□ 1.63
CDC42EP1-204ENST00000434728 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
CDC42EP1-204ENST00000434728 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
CDC42EP1-204ENST00000434728 PRDM2Q13029 1718 aa25.03■■□□□ 1.6
CDC42EP1-204ENST00000434728 OSCARQ8IYS5 282 aa24.99■■□□□ 1.59
CDC42EP1-204ENST00000434728 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
CDC42EP1-204ENST00000434728 IFT140Q96RY7 1462 aa24.83■■□□□ 1.57
CDC42EP1-204ENST00000434728 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
CDC42EP1-204ENST00000434728 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
CDC42EP1-204ENST00000434728 ABCC8Q09428 1581 aa24.75■■□□□ 1.55
CDC42EP1-204ENST00000434728 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
CDC42EP1-204ENST00000434728 EIF4G3O43432 1585 aaKnown RBP24.67■■□□□ 1.54
CDC42EP1-204ENST00000434728 RIMBP3CA6NJZ7 1639 aa24.67■■□□□ 1.54
CDC42EP1-204ENST00000434728 RIMBP3BA6NNM3 1639 aa24.67■■□□□ 1.54
CDC42EP1-204ENST00000434728 RIMBP3Q9UFD9 1639 aa24.67■■□□□ 1.54
CDC42EP1-204ENST00000434728 ARHGEF11O15085 1522 aa24.56■■□□□ 1.52
CDC42EP1-204ENST00000434728 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.529e-7■□□□□ 8.7
CDC42EP1-204ENST00000434728 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
CDC42EP1-204ENST00000434728 CHD1O14646 1710 aa24.54■■□□□ 1.52
CDC42EP1-204ENST00000434728 FBLN2P98095 1184 aa24.53■■□□□ 1.52
CDC42EP1-204ENST00000434728 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
CDC42EP1-204ENST00000434728 CYB5RLQ6IPT4 315 aa24.43■■□□□ 1.5
CDC42EP1-204ENST00000434728 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
CDC42EP1-204ENST00000434728 SOGA1O94964 1423 aa24.43■■□□□ 1.5
CDC42EP1-204ENST00000434728 TDRD9Q8NDG6 1382 aaKnown RBP24.39■■□□□ 1.49
CDC42EP1-204ENST00000434728 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
CDC42EP1-204ENST00000434728 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
CDC42EP1-204ENST00000434728 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
CDC42EP1-204ENST00000434728 ARAP1Q96P48 1450 aa24.3■■□□□ 1.48
CDC42EP1-204ENST00000434728 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
CDC42EP1-204ENST00000434728 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
CDC42EP1-204ENST00000434728 CUX1P39880 1505 aa24.29■■□□□ 1.48
CDC42EP1-204ENST00000434728 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
CDC42EP1-204ENST00000434728 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
CDC42EP1-204ENST00000434728 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
CDC42EP1-204ENST00000434728 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
CDC42EP1-204ENST00000434728 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
CDC42EP1-204ENST00000434728 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
CDC42EP1-204ENST00000434728 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
CDC42EP1-204ENST00000434728 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
CDC42EP1-204ENST00000434728 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
CDC42EP1-204ENST00000434728 ABCA5Q8WWZ7 1642 aa24.03■■□□□ 1.44
CDC42EP1-204ENST00000434728 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.43
CDC42EP1-204ENST00000434728 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
CDC42EP1-204ENST00000434728 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
CDC42EP1-204ENST00000434728 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
CDC42EP1-204ENST00000434728 ADAMTS12P58397 1594 aa23.89■■□□□ 1.41
CDC42EP1-204ENST00000434728 FHAD1B1AJZ9 1412 aa23.82■■□□□ 1.4
CDC42EP1-204ENST00000434728 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
CDC42EP1-204ENST00000434728 ERCC6L2Q5T890 1561 aa23.79■■□□□ 1.4
CDC42EP1-204ENST00000434728 NUP160Q12769 1436 aa23.79■■□□□ 1.4
CDC42EP1-204ENST00000434728 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
CDC42EP1-204ENST00000434728 SHROOM2Q13796 1616 aa23.71■■□□□ 1.39
CDC42EP1-204ENST00000434728 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
CDC42EP1-204ENST00000434728 PRG4Q92954 1404 aaPredicted RBP23.64■■□□□ 1.37
CDC42EP1-204ENST00000434728 JPH4Q96JJ6 628 aa23.59■■□□□ 1.37
CDC42EP1-204ENST00000434728 RUSC2Q8N2Y8 1516 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms