RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
SCAF4-203ENST00000434667 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
SCAF4-203ENST00000434667 ARHGEF28Q8N1W1 1705 aaKnown RBP13.46□□□□□ -0.25
SCAF4-203ENST00000434667 KDM5AP29375 1690 aaKnown RBP13.46□□□□□ -0.25
SCAF4-203ENST00000434667 RLBP1P12271 317 aa13.46□□□□□ -0.26
SCAF4-203ENST00000434667 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.26
SCAF4-203ENST00000434667 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
SCAF4-203ENST00000434667 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
SCAF4-203ENST00000434667 ZNF521Q96K83 1311 aa13.45□□□□□ -0.26
SCAF4-203ENST00000434667 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
SCAF4-203ENST00000434667 HSP90AA1P07900 732 aaKnown RBP13.44□□□□□ -0.26
SCAF4-203ENST00000434667 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
SCAF4-203ENST00000434667 GLIPR1L2Q4G1C9 344 aa13.43□□□□□ -0.26
SCAF4-203ENST00000434667 FAM43AQ8N2R8 423 aa13.43□□□□□ -0.26
SCAF4-203ENST00000434667 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
SCAF4-203ENST00000434667 FANCAO15360 1455 aa13.42□□□□□ -0.26
SCAF4-203ENST00000434667 XRCC6P12956 609 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCAF4-203ENST00000434667 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
SCAF4-203ENST00000434667 MFAP1P55081 439 aaKnown RBP13.41□□□□□ -0.26
SCAF4-203ENST00000434667 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
SCAF4-203ENST00000434667 PDZRN3Q9UPQ7 1066 aa13.4□□□□□ -0.26
SCAF4-203ENST00000434667 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
SCAF4-203ENST00000434667 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SCAF4-203ENST00000434667 GLI2P10070 1586 aa13.39□□□□□ -0.27
SCAF4-203ENST00000434667 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 RSPH6AQ9H0K4 717 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 ANTXR1Q9H6X2 564 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 MLH3Q9UHC1 1453 aa13.38□□□□□ -0.27
SCAF4-203ENST00000434667 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
SCAF4-203ENST00000434667 BECN1Q14457 450 aa13.37□□□□□ -0.27
SCAF4-203ENST00000434667 WWC1Q8IX03 1113 aa13.36□□□□□ -0.27
SCAF4-203ENST00000434667 ABCC3O15438 1527 aa13.36□□□□□ -0.27
SCAF4-203ENST00000434667 NPC1L1Q9UHC9 1359 aa13.36□□□□□ -0.27
SCAF4-203ENST00000434667 NEXMIFQ5QGS0 1516 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 UGGT1Q9NYU2 1555 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
SCAF4-203ENST00000434667 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 UPF2Q9HAU5 1272 aaKnown RBP13.35□□□□□ -0.27
SCAF4-203ENST00000434667 NKTRP30414 1462 aaKnown RBP13.35□□□□□ -0.27
SCAF4-203ENST00000434667 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
SCAF4-203ENST00000434667 E9PSI1 815 aa13.34□□□□□ -0.27
SCAF4-203ENST00000434667 ERVK-7P63135 1459 aa13.34□□□□□ -0.27
SCAF4-203ENST00000434667 GOLGA6L3A6NEY3 463 aa13.34□□□□□ -0.27
SCAF4-203ENST00000434667 TSR2Q969E8 191 aaKnown RBP13.34□□□□□ -0.27
SCAF4-203ENST00000434667 NCLP19338 710 aaKnown RBP13.33□□□□□ -0.27
SCAF4-203ENST00000434667 SBNO2Q9Y2G9 1366 aa13.33□□□□□ -0.28
SCAF4-203ENST00000434667 ADGRB2O60241 1585 aa13.33□□□□□ -0.28
SCAF4-203ENST00000434667 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
SCAF4-203ENST00000434667 TBC1D32Q96NH3 1257 aa13.32□□□□□ -0.28
SCAF4-203ENST00000434667 MCM4P33991 863 aa13.32□□□□□ -0.28
SCAF4-203ENST00000434667 RARSP54136 660 aaKnown RBP13.32□□□□□ -0.28
SCAF4-203ENST00000434667 PREX1Q8TCU6 1659 aa13.32□□□□□ -0.28
SCAF4-203ENST00000434667 TMEM131LA2VDJ0 1609 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 TCP11L2Q8N4U5 519 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 TRIM44Q96DX7 344 aaPredicted RBP13.31□□□□□ -0.28
SCAF4-203ENST00000434667 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
SCAF4-203ENST00000434667 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
SCAF4-203ENST00000434667 TRAK2O60296 914 aa13.31□□□□□ -0.28
SCAF4-203ENST00000434667 ERBB4Q15303 1308 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 POGZQ7Z3K3 1410 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 RIMBP3CA6NJZ7 1639 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 RIMBP3BA6NNM3 1639 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 RIMBP3Q9UFD9 1639 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 CHGAP10645 457 aaKnown RBP13.3□□□□□ -0.28
SCAF4-203ENST00000434667 NUTM2DQ5VT03 806 aaPredicted RBP13.3□□□□□ -0.28
SCAF4-203ENST00000434667 NLRP1Q9C000 1473 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 CGNL1Q0VF96 1302 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
SCAF4-203ENST00000434667 NOS1P29475 1434 aa13.29□□□□□ -0.28
SCAF4-203ENST00000434667 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
SCAF4-203ENST00000434667 C22orf23Q9BZE7 217 aa13.28□□□□□ -0.28
SCAF4-203ENST00000434667 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
SCAF4-203ENST00000434667 L1TD1Q5T7N2 865 aaKnown RBP13.27□□□□□ -0.28
SCAF4-203ENST00000434667 PDE3AQ14432 1141 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 GAS2L3Q86XJ1 694 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 TRAK1Q9UPV9 953 aa13.27□□□□□ -0.29
SCAF4-203ENST00000434667 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 NRXN3Q9Y4C0 1643 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 ARHGAP31Q2M1Z3 1444 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 ASXL2Q76L83 1435 aa13.26□□□□□ -0.29
SCAF4-203ENST00000434667 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
SCAF4-203ENST00000434667 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
SCAF4-203ENST00000434667 ADGRF5Q8IZF2 1346 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 MTHFSP49914 203 aa13.25□□□□□ -0.29
SCAF4-203ENST00000434667 LNPKQ9C0E8 428 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 ADGRL1O94910 1474 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 PKNOX2Q96KN3 472 aa13.24□□□□□ -0.29
SCAF4-203ENST00000434667 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
SCAF4-203ENST00000434667 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
SCAF4-203ENST00000434667 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
SCAF4-203ENST00000434667 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.299e-23■■■■□ 19.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms