RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 ABCC11Q96J66 1382 aa19.56■□□□□ 0.72
EDEM1-202ENST00000434243 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
EDEM1-202ENST00000434243 PLEKHH1Q9ULM0 1364 aa19.54■□□□□ 0.72
EDEM1-202ENST00000434243 SHPRHQ149N8 1683 aa19.53■□□□□ 0.72
EDEM1-202ENST00000434243 YTHDC2Q9H6S0 1430 aaKnown RBP19.53■□□□□ 0.72
EDEM1-202ENST00000434243 DHX57Q6P158 1386 aaKnown RBP19.53■□□□□ 0.72
EDEM1-202ENST00000434243 PNPLA6Q8IY17 1366 aa19.53■□□□□ 0.72
EDEM1-202ENST00000434243 TECPR2O15040 1411 aa19.52■□□□□ 0.72
EDEM1-202ENST00000434243 NHSL1Q5SYE7 1610 aa19.52■□□□□ 0.72
EDEM1-202ENST00000434243 HRCP23327 699 aa19.52■□□□□ 0.72
EDEM1-202ENST00000434243 C8orf37Q96NL8 207 aa19.52■□□□□ 0.72
EDEM1-202ENST00000434243 SOS2Q07890 1332 aaPredicted RBP19.51■□□□□ 0.71
EDEM1-202ENST00000434243 IFT172Q9UG01 1749 aa19.51■□□□□ 0.71
EDEM1-202ENST00000434243 FOXO3O43524 673 aa19.5■□□□□ 0.71
EDEM1-202ENST00000434243 ADAMTS2O95450 1211 aa19.5■□□□□ 0.71
EDEM1-202ENST00000434243 SAFB2Q14151 953 aaKnown RBP eCLIP19.5■□□□□ 0.71
EDEM1-202ENST00000434243 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
EDEM1-202ENST00000434243 AFF2P51816 1311 aa19.5■□□□□ 0.71
EDEM1-202ENST00000434243 MYOM2P54296 1465 aa19.49■□□□□ 0.71
EDEM1-202ENST00000434243 XPCQ01831 940 aaPredicted RBP19.49■□□□□ 0.71
EDEM1-202ENST00000434243 NPHP3Q7Z494 1330 aa19.49■□□□□ 0.71
EDEM1-202ENST00000434243 RXRBP28702 533 aa19.48■□□□□ 0.71
EDEM1-202ENST00000434243 SIRT1Q96EB6 747 aa19.48■□□□□ 0.71
EDEM1-202ENST00000434243 POGKQ9P215 609 aa19.48■□□□□ 0.71
EDEM1-202ENST00000434243 NGLY1Q96IV0 654 aa19.47■□□□□ 0.71
EDEM1-202ENST00000434243 PRAM1Q96QH2 718 aa19.47■□□□□ 0.71
EDEM1-202ENST00000434243 CDC42BPGQ6DT37 1551 aa19.47■□□□□ 0.71
EDEM1-202ENST00000434243 NRXN1Q9ULB1 1477 aa19.47■□□□□ 0.71
EDEM1-202ENST00000434243 TRAK1Q9UPV9 953 aa19.45■□□□□ 0.7
EDEM1-202ENST00000434243 QTRT2Q9H974 415 aaKnown RBP19.43■□□□□ 0.7
EDEM1-202ENST00000434243 KNDC1Q76NI1 1749 aa19.42■□□□□ 0.7
EDEM1-202ENST00000434243 STAC3Q96MF2 364 aa19.41■□□□□ 0.7
EDEM1-202ENST00000434243 LAMC1P11047 1609 aa19.4■□□□□ 0.7
EDEM1-202ENST00000434243 KRT28Q7Z3Y7 464 aa19.39■□□□□ 0.69
EDEM1-202ENST00000434243 USP21Q9UK80 565 aa19.39■□□□□ 0.69
EDEM1-202ENST00000434243 PHF8Q9UPP1 1060 aa19.39■□□□□ 0.69
EDEM1-202ENST00000434243 HIRIP3Q9BW71 556 aaPredicted RBP19.38■□□□□ 0.69
EDEM1-202ENST00000434243 PXDNQ92626 1479 aa19.37■□□□□ 0.69
EDEM1-202ENST00000434243 MINK1Q8N4C8 1332 aaPredicted RBP19.37■□□□□ 0.69
EDEM1-202ENST00000434243 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
EDEM1-202ENST00000434243 RBM6P78332 1123 aaKnown RBP19.36■□□□□ 0.69
EDEM1-202ENST00000434243 PSME1Q06323 249 aa19.36■□□□□ 0.69
EDEM1-202ENST00000434243 LMOD2Q6P5Q4 547 aa19.35■□□□□ 0.69
EDEM1-202ENST00000434243 PMFBP1Q8TBY8 1022 aa19.35■□□□□ 0.69
EDEM1-202ENST00000434243 DLC1Q96QB1 1528 aa19.35■□□□□ 0.69
EDEM1-202ENST00000434243 SPATA31A3Q5VYP0 1347 aa19.34■□□□□ 0.69
EDEM1-202ENST00000434243 HAP1P54257 671 aaPredicted RBP19.34■□□□□ 0.69
EDEM1-202ENST00000434243 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
EDEM1-202ENST00000434243 ADGRB1O14514 1584 aa19.33■□□□□ 0.69
EDEM1-202ENST00000434243 TRPC5Q9UL62 973 aaPredicted RBP19.33■□□□□ 0.68
EDEM1-202ENST00000434243 FNBP4Q8N3X1 1017 aaPredicted RBP19.32■□□□□ 0.68
EDEM1-202ENST00000434243 UPF1Q92900 1129 aaKnown RBP eCLIP19.3■□□□□ 0.68
EDEM1-202ENST00000434243 CDK12Q9NYV4 1490 aaPredicted RBP19.29■□□□□ 0.68
EDEM1-202ENST00000434243 WASLO00401 505 aaPredicted RBP19.29■□□□□ 0.68
EDEM1-202ENST00000434243 KIF1AQ12756 1690 aa19.29■□□□□ 0.68
EDEM1-202ENST00000434243 COL22A1Q8NFW1 1626 aaPredicted RBP19.29■□□□□ 0.68
EDEM1-202ENST00000434243 ANKARQ7Z5J8 1434 aa19.28■□□□□ 0.68
EDEM1-202ENST00000434243 CABLES1Q8TDN4 633 aa19.28■□□□□ 0.68
EDEM1-202ENST00000434243 RGS12O14924 1447 aa19.27■□□□□ 0.68
EDEM1-202ENST00000434243 EIF3AQ14152 1382 aaKnown RBP19.27■□□□□ 0.68
EDEM1-202ENST00000434243 TNS3Q68CZ2 1445 aa19.26■□□□□ 0.67
EDEM1-202ENST00000434243 NGDNQ8NEJ9 315 aaKnown RBP19.26■□□□□ 0.67
EDEM1-202ENST00000434243 SBNO1A3KN83 1393 aa19.25■□□□□ 0.67
EDEM1-202ENST00000434243 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
EDEM1-202ENST00000434243 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
EDEM1-202ENST00000434243 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
EDEM1-202ENST00000434243 ARHGEF10O15013 1369 aa19.23■□□□□ 0.67
EDEM1-202ENST00000434243 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
EDEM1-202ENST00000434243 ATRNO75882 1429 aa19.23■□□□□ 0.67
EDEM1-202ENST00000434243 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
EDEM1-202ENST00000434243 BCL9LQ86UU0 1499 aa19.22■□□□□ 0.67
EDEM1-202ENST00000434243 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
EDEM1-202ENST00000434243 PAK3O75914 559 aaPredicted RBP19.22■□□□□ 0.67
EDEM1-202ENST00000434243 UNC5CLQ8IV45 518 aa19.22■□□□□ 0.67
EDEM1-202ENST00000434243 SIN3AQ96ST3 1273 aa19.22■□□□□ 0.67
EDEM1-202ENST00000434243 TULP4Q9NRJ4 1543 aa19.21■□□□□ 0.67
EDEM1-202ENST00000434243 NUDT16Q96DE0 195 aaKnown RBP19.21■□□□□ 0.67
EDEM1-202ENST00000434243 GJD4Q96KN9 370 aaPredicted RBP19.21■□□□□ 0.67
EDEM1-202ENST00000434243 CDK19Q9BWU1 502 aa19.21■□□□□ 0.67
EDEM1-202ENST00000434243 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
EDEM1-202ENST00000434243 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
EDEM1-202ENST00000434243 CCDC9Q9Y3X0 531 aaKnown RBP19.19■□□□□ 0.66
EDEM1-202ENST00000434243 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
EDEM1-202ENST00000434243 SLIT2O94813 1529 aa19.15■□□□□ 0.66
EDEM1-202ENST00000434243 FAM83GA6ND36 823 aa19.15■□□□□ 0.66
EDEM1-202ENST00000434243 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
EDEM1-202ENST00000434243 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.66
EDEM1-202ENST00000434243 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
EDEM1-202ENST00000434243 CENPJQ9HC77 1338 aaPredicted RBP19.14■□□□□ 0.65
EDEM1-202ENST00000434243 MARF1Q9Y4F3 1742 aaKnown RBP19.13■□□□□ 0.65
EDEM1-202ENST00000434243 ATP7BP35670 1465 aa19.12■□□□□ 0.65
EDEM1-202ENST00000434243 VPS72Q15906 364 aa19.12■□□□□ 0.65
EDEM1-202ENST00000434243 RALGAPBQ86X10 1494 aa19.11■□□□□ 0.65
EDEM1-202ENST00000434243 ACEP12821 1306 aa19.11■□□□□ 0.65
EDEM1-202ENST00000434243 NUTM2GQ5VZR2 741 aa19.11■□□□□ 0.65
EDEM1-202ENST00000434243 CABP2Q9NPB3 220 aa19.11■□□□□ 0.65
EDEM1-202ENST00000434243 KIAA1210Q9ULL0 1709 aa19.11■□□□□ 0.65
EDEM1-202ENST00000434243 A0A0G2JS52 829 aa19.1■□□□□ 0.65
EDEM1-202ENST00000434243 MYT1Q01538 1121 aa19.1■□□□□ 0.65
EDEM1-202ENST00000434243 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms