RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CC2D1BQ5T0F9 858 aaKnown RBP19.21■□□□□ 0.67
DDX56-205ENST00000433257 THEMISQ8N1K5 641 aaPredicted RBP19.21■□□□□ 0.67
DDX56-205ENST00000433257 TRPM2O94759 1503 aa19.21■□□□□ 0.67
DDX56-205ENST00000433257 A2ML1A8K2U0 1454 aa19.19■□□□□ 0.66
DDX56-205ENST00000433257 ZNF521Q96K83 1311 aa19.19■□□□□ 0.66
DDX56-205ENST00000433257 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
DDX56-205ENST00000433257 RGL3Q3MIN7 710 aa19.18■□□□□ 0.66
DDX56-205ENST00000433257 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
DDX56-205ENST00000433257 PPP2R1AP30153 589 aa19.17■□□□□ 0.66
DDX56-205ENST00000433257 AAMPQ13685 434 aa19.17■□□□□ 0.66
DDX56-205ENST00000433257 KDM5AP29375 1690 aaKnown RBP19.17■□□□□ 0.66
DDX56-205ENST00000433257 CHGAP10645 457 aaKnown RBP19.17■□□□□ 0.66
DDX56-205ENST00000433257 DUSP27Q5VZP5 1158 aa19.17■□□□□ 0.66
DDX56-205ENST00000433257 PTPRTO14522 1441 aa19.17■□□□□ 0.66
DDX56-205ENST00000433257 CEP170BQ9Y4F5 1589 aaPredicted RBP19.16■□□□□ 0.66
DDX56-205ENST00000433257 UGGT1Q9NYU2 1555 aa19.16■□□□□ 0.66
DDX56-205ENST00000433257 ADAMTS8Q9UP79 889 aa19.15■□□□□ 0.66
DDX56-205ENST00000433257 VIRMAQ69YN4 1812 aaKnown RBP19.15■□□□□ 0.66
DDX56-205ENST00000433257 NKTRP30414 1462 aaKnown RBP19.14■□□□□ 0.65
DDX56-205ENST00000433257 LAS1LQ9Y4W2 734 aaKnown RBP19.14■□□□□ 0.65
DDX56-205ENST00000433257 PLIN1O60240 522 aa19.12■□□□□ 0.65
DDX56-205ENST00000433257 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
DDX56-205ENST00000433257 GSE1Q14687 1217 aa19.12■□□□□ 0.65
DDX56-205ENST00000433257 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
DDX56-205ENST00000433257 TRMT2AQ8IZ69 625 aaKnown RBP19.12■□□□□ 0.65
DDX56-205ENST00000433257 ZNF142P52746 1687 aaPredicted RBP19.12■□□□□ 0.65
DDX56-205ENST00000433257 MYOM1P52179 1685 aa19.11■□□□□ 0.65
DDX56-205ENST00000433257 E9PSI1 815 aa19.11■□□□□ 0.65
DDX56-205ENST00000433257 ANKLE2Q86XL3 938 aa19.11■□□□□ 0.65
DDX56-205ENST00000433257 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
DDX56-205ENST00000433257 PLEKHH1Q9ULM0 1364 aa19.1■□□□□ 0.65
DDX56-205ENST00000433257 SENP3-EIF4A1A0A087X0R7 540 aa19.1■□□□□ 0.65
DDX56-205ENST00000433257 HDGFP51858 240 aaKnown RBP19.1■□□□□ 0.65
DDX56-205ENST00000433257 EID1Q9Y6B2 187 aa19.09■□□□□ 0.65
DDX56-205ENST00000433257 PIK3C2BO00750 1634 aa19.09■□□□□ 0.65
DDX56-205ENST00000433257 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.65
DDX56-205ENST00000433257 MAPK8IP3Q9UPT6 1336 aa19.08■□□□□ 0.65
DDX56-205ENST00000433257 PDE3AQ14432 1141 aa19.08■□□□□ 0.64
DDX56-205ENST00000433257 MYOM2P54296 1465 aa19.07■□□□□ 0.64
DDX56-205ENST00000433257 NCKAP5LQ9HCH0 1330 aa19.07■□□□□ 0.64
DDX56-205ENST00000433257 UBR1Q8IWV7 1749 aa19.06■□□□□ 0.64
DDX56-205ENST00000433257 NFKBIBQ15653 356 aa19.06■□□□□ 0.64
DDX56-205ENST00000433257 C8orf34Q49A92 452 aa19.06■□□□□ 0.64
DDX56-205ENST00000433257 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
DDX56-205ENST00000433257 TMEM2Q9UHN6 1383 aa19.04■□□□□ 0.64
DDX56-205ENST00000433257 ADGRB3O60242 1522 aa19.04■□□□□ 0.64
DDX56-205ENST00000433257 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
DDX56-205ENST00000433257 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
DDX56-205ENST00000433257 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.03■□□□□ 0.64
DDX56-205ENST00000433257 CLTCL1P53675 1640 aa19.03■□□□□ 0.64
DDX56-205ENST00000433257 TMEM131LA2VDJ0 1609 aa19.02■□□□□ 0.63
DDX56-205ENST00000433257 BECN1Q14457 450 aa19.01■□□□□ 0.63
DDX56-205ENST00000433257 C20orf194Q5TEA3 1177 aa19.01■□□□□ 0.63
DDX56-205ENST00000433257 POLR3AO14802 1390 aaPredicted RBP19.01■□□□□ 0.63
DDX56-205ENST00000433257 LTKP29376 864 aa19.01■□□□□ 0.63
DDX56-205ENST00000433257 SLIT1O75093 1534 aa19■□□□□ 0.63
DDX56-205ENST00000433257 KIF1BO60333 1816 aa19■□□□□ 0.63
DDX56-205ENST00000433257 ARHGAP23Q9P227 1491 aa18.99■□□□□ 0.63
DDX56-205ENST00000433257 RIMS2Q9UQ26 1411 aa18.98■□□□□ 0.63
DDX56-205ENST00000433257 RPGRIP1LQ68CZ1 1315 aa18.98■□□□□ 0.63
DDX56-205ENST00000433257 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
DDX56-205ENST00000433257 STRCQ7RTU9 1775 aa18.97■□□□□ 0.63
DDX56-205ENST00000433257 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
DDX56-205ENST00000433257 PMFBP1Q8TBY8 1022 aa18.96■□□□□ 0.63
DDX56-205ENST00000433257 MYO5BQ9ULV0 1848 aa18.96■□□□□ 0.63
DDX56-205ENST00000433257 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
DDX56-205ENST00000433257 VGFO15240 615 aaPredicted RBP18.95■□□□□ 0.62
DDX56-205ENST00000433257 IFT172Q9UG01 1749 aa18.95■□□□□ 0.62
DDX56-205ENST00000433257 CENPJQ9HC77 1338 aaPredicted RBP18.94■□□□□ 0.62
DDX56-205ENST00000433257 NPHP4O75161 1426 aaPredicted RBP18.94■□□□□ 0.62
DDX56-205ENST00000433257 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
DDX56-205ENST00000433257 ZFYVE9O95405 1425 aa18.93■□□□□ 0.62
DDX56-205ENST00000433257 MED14O60244 1454 aa18.92■□□□□ 0.62
DDX56-205ENST00000433257 CLUAP1Q96AJ1 413 aa18.92■□□□□ 0.62
DDX56-205ENST00000433257 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
DDX56-205ENST00000433257 IL27Q8NEV9 243 aa18.92■□□□□ 0.62
DDX56-205ENST00000433257 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
DDX56-205ENST00000433257 APAF1O14727 1248 aa18.91■□□□□ 0.62
DDX56-205ENST00000433257 CANXP27824 592 aaKnown RBP18.9■□□□□ 0.62
DDX56-205ENST00000433257 RGS3P49796 1198 aa18.9■□□□□ 0.62
DDX56-205ENST00000433257 PLEKHG1Q9ULL1 1385 aa18.9■□□□□ 0.62
DDX56-205ENST00000433257 WDR63Q8IWG1 891 aa18.89■□□□□ 0.61
DDX56-205ENST00000433257 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.61
DDX56-205ENST00000433257 SLC26A8Q96RN1 970 aa18.89■□□□□ 0.61
DDX56-205ENST00000433257 CCDC27Q2M243 656 aa18.88■□□□□ 0.61
DDX56-205ENST00000433257 PUS7Q96PZ0 661 aaKnown RBP18.88■□□□□ 0.61
DDX56-205ENST00000433257 CT47B1P0C2W7 299 aaPredicted RBP18.87■□□□□ 0.61
DDX56-205ENST00000433257 L1TD1Q5T7N2 865 aaKnown RBP18.87■□□□□ 0.61
DDX56-205ENST00000433257 NEXMIFQ5QGS0 1516 aa18.86■□□□□ 0.61
DDX56-205ENST00000433257 RUNDC1Q96C34 613 aa18.86■□□□□ 0.61
DDX56-205ENST00000433257 NSD2O96028 1365 aa18.85■□□□□ 0.61
DDX56-205ENST00000433257 SHPRHQ149N8 1683 aa18.85■□□□□ 0.61
DDX56-205ENST00000433257 FAM43AQ8N2R8 423 aa18.85■□□□□ 0.61
DDX56-205ENST00000433257 TBX22Q9Y458 520 aa18.85■□□□□ 0.61
DDX56-205ENST00000433257 IQSEC2Q5JU85 1478 aa18.84■□□□□ 0.61
DDX56-205ENST00000433257 WWC1Q8IX03 1113 aa18.84■□□□□ 0.61
DDX56-205ENST00000433257 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
DDX56-205ENST00000433257 BCAR3O75815 825 aa18.83■□□□□ 0.61
DDX56-205ENST00000433257 CFAP53Q96M91 514 aa18.83■□□□□ 0.61
DDX56-205ENST00000433257 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms