RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 NRXN1Q9ULB1 1477 aa33.75■■■□□ 2.99
HOMER3-203ENST00000433218 TMEM132EQ6IEE7 984 aa33.73■■■□□ 2.99
HOMER3-203ENST00000433218 MYOM2P54296 1465 aa33.73■■■□□ 2.99
HOMER3-203ENST00000433218 STK26Q9P289 416 aa33.72■■■□□ 2.99
HOMER3-203ENST00000433218 LRPPRCP42704 1394 aaKnown RBP33.72■■■□□ 2.99
HOMER3-203ENST00000433218 COL22A1Q8NFW1 1626 aaPredicted RBP33.71■■■□□ 2.99
HOMER3-203ENST00000433218 WAPLQ7Z5K2 1190 aa33.7■■■□□ 2.98
HOMER3-203ENST00000433218 YTHDC2Q9H6S0 1430 aaKnown RBP33.69■■■□□ 2.98
HOMER3-203ENST00000433218 MARF1Q9Y4F3 1742 aaKnown RBP33.67■■■□□ 2.98
HOMER3-203ENST00000433218 PXDNQ92626 1479 aa33.67■■■□□ 2.98
HOMER3-203ENST00000433218 LRRC59Q96AG4 307 aaKnown RBP33.65■■■□□ 2.98
HOMER3-203ENST00000433218 SOS2Q07890 1332 aaPredicted RBP33.64■■■□□ 2.98
HOMER3-203ENST00000433218 AFF2P51816 1311 aa33.63■■■□□ 2.97
HOMER3-203ENST00000433218 ABCC11Q96J66 1382 aa33.63■■■□□ 2.97
HOMER3-203ENST00000433218 NUTM2FA1L443 756 aa33.61■■■□□ 2.97
HOMER3-203ENST00000433218 KIF1AQ12756 1690 aa33.6■■■□□ 2.97
HOMER3-203ENST00000433218 ADGRB1O14514 1584 aa33.59■■■□□ 2.97
HOMER3-203ENST00000433218 ZNF772Q68DY9 489 aaPredicted RBP33.59■■■□□ 2.97
HOMER3-203ENST00000433218 USP32Q8NFA0 1604 aa33.58■■■□□ 2.97
HOMER3-203ENST00000433218 CFAP70Q5T0N1 1121 aa33.57■■■□□ 2.96
HOMER3-203ENST00000433218 C8orf37Q96NL8 207 aa33.57■■■□□ 2.96
HOMER3-203ENST00000433218 XPCQ01831 940 aaPredicted RBP33.55■■■□□ 2.96
HOMER3-203ENST00000433218 ESCO1Q5FWF5 840 aa33.54■■■□□ 2.96
HOMER3-203ENST00000433218 C14orf93Q9H972 538 aaKnown RBP33.53■■■□□ 2.96
HOMER3-203ENST00000433218 ADAMTS2O95450 1211 aa33.53■■■□□ 2.96
HOMER3-203ENST00000433218 RGS12O14924 1447 aa33.51■■■□□ 2.96
HOMER3-203ENST00000433218 ABCA3Q99758 1704 aa33.51■■■□□ 2.95
HOMER3-203ENST00000433218 ADGRB2O60241 1585 aa33.5■■■□□ 2.95
HOMER3-203ENST00000433218 DLC1Q96QB1 1528 aa33.49■■■□□ 2.95
HOMER3-203ENST00000433218 ARHGEF28Q8N1W1 1705 aaKnown RBP33.48■■■□□ 2.95
HOMER3-203ENST00000433218 EP400Q96L91 3159 aa33.48■■■□□ 2.95
HOMER3-203ENST00000433218 CDK12Q9NYV4 1490 aaPredicted RBP33.47■■■□□ 2.95
HOMER3-203ENST00000433218 FOXO3O43524 673 aa33.47■■■□□ 2.95
HOMER3-203ENST00000433218 NPHP3Q7Z494 1330 aa33.47■■■□□ 2.95
HOMER3-203ENST00000433218 ACIN1Q9UKV3 1341 aaKnown RBP33.47■■■□□ 2.95
HOMER3-203ENST00000433218 SAFB2Q14151 953 aaKnown RBP eCLIP33.45■■■□□ 2.95
HOMER3-203ENST00000433218 RXRBP28702 533 aa33.44■■■□□ 2.94
HOMER3-203ENST00000433218 DHX57Q6P158 1386 aaKnown RBP33.43■■■□□ 2.94
HOMER3-203ENST00000433218 PRAM1Q96QH2 718 aa33.41■■■□□ 2.94
HOMER3-203ENST00000433218 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.39■■■□□ 2.94
HOMER3-203ENST00000433218 TRPM3Q9HCF6 1732 aaPredicted RBP33.38■■■□□ 2.93
HOMER3-203ENST00000433218 NGLY1Q96IV0 654 aa33.37■■■□□ 2.93
HOMER3-203ENST00000433218 QTRT2Q9H974 415 aaKnown RBP33.36■■■□□ 2.93
HOMER3-203ENST00000433218 KDM2AQ9Y2K7 1162 aa33.36■■■□□ 2.93
HOMER3-203ENST00000433218 PLCH1Q4KWH8 1693 aa33.35■■■□□ 2.93
HOMER3-203ENST00000433218 UPF1Q92900 1129 aaKnown RBP eCLIP33.35■■■□□ 2.93
HOMER3-203ENST00000433218 SIRT1Q96EB6 747 aa33.35■■■□□ 2.93
HOMER3-203ENST00000433218 DCAF11Q8TEB1 546 aa33.34■■■□□ 2.93
HOMER3-203ENST00000433218 ATRNO75882 1429 aa33.33■■■□□ 2.93
HOMER3-203ENST00000433218 BCL9LQ86UU0 1499 aa33.31■■■□□ 2.92
HOMER3-203ENST00000433218 TNS3Q68CZ2 1445 aa33.3■■■□□ 2.92
HOMER3-203ENST00000433218 TRAK1Q9UPV9 953 aa33.3■■■□□ 2.92
HOMER3-203ENST00000433218 ALS2Q96Q42 1657 aa33.3■■■□□ 2.92
HOMER3-203ENST00000433218 SPATA31A3Q5VYP0 1347 aa33.29■■■□□ 2.92
HOMER3-203ENST00000433218 RBM6P78332 1123 aaKnown RBP33.29■■■□□ 2.92
HOMER3-203ENST00000433218 HIRIP3Q9BW71 556 aaPredicted RBP33.29■■■□□ 2.92
HOMER3-203ENST00000433218 USP21Q9UK80 565 aa33.29■■■□□ 2.92
HOMER3-203ENST00000433218 CRYBG1Q9Y4K1 1723 aa33.28■■■□□ 2.92
HOMER3-203ENST00000433218 KIAA1210Q9ULL0 1709 aa33.27■■■□□ 2.92
HOMER3-203ENST00000433218 FNBP4Q8N3X1 1017 aaPredicted RBP33.27■■■□□ 2.92
HOMER3-203ENST00000433218 PHF8Q9UPP1 1060 aa33.27■■■□□ 2.92
HOMER3-203ENST00000433218 TULP4Q9NRJ4 1543 aa33.27■■■□□ 2.92
HOMER3-203ENST00000433218 ITSN1Q15811 1721 aa33.26■■■□□ 2.92
HOMER3-203ENST00000433218 GLI3P10071 1580 aa33.26■■■□□ 2.91
HOMER3-203ENST00000433218 HRCP23327 699 aa33.26■■■□□ 2.91
HOMER3-203ENST00000433218 ANKARQ7Z5J8 1434 aa33.26■■■□□ 2.91
HOMER3-203ENST00000433218 POGKQ9P215 609 aa33.25■■■□□ 2.91
HOMER3-203ENST00000433218 BRWD3Q6RI45 1802 aa33.24■■■□□ 2.91
HOMER3-203ENST00000433218 MINK1Q8N4C8 1332 aaPredicted RBP33.24■■■□□ 2.91
HOMER3-203ENST00000433218 PRR36Q9H6K5 1346 aa33.24■■■□□ 2.91
HOMER3-203ENST00000433218 KRT28Q7Z3Y7 464 aa33.24■■■□□ 2.91
HOMER3-203ENST00000433218 TOPAZ1Q8N9V7 1692 aa33.22■■■□□ 2.91
HOMER3-203ENST00000433218 SLIT2O94813 1529 aa33.21■■■□□ 2.91
HOMER3-203ENST00000433218 NWD2Q9ULI1 1742 aa33.21■■■□□ 2.91
HOMER3-203ENST00000433218 PLEKHG5O94827 1062 aa33.2■■■□□ 2.91
HOMER3-203ENST00000433218 PMFBP1Q8TBY8 1022 aa33.2■■■□□ 2.91
HOMER3-203ENST00000433218 NRAPQ86VF7 1730 aa33.2■■■□□ 2.91
HOMER3-203ENST00000433218 CABLES1Q8TDN4 633 aa33.19■■■□□ 2.9
HOMER3-203ENST00000433218 TRPC5Q9UL62 973 aaPredicted RBP33.19■■■□□ 2.9
HOMER3-203ENST00000433218 ATP7BP35670 1465 aa33.18■■■□□ 2.9
HOMER3-203ENST00000433218 SBNO1A3KN83 1393 aa33.15■■■□□ 2.9
HOMER3-203ENST00000433218 RALGAPBQ86X10 1494 aa33.13■■■□□ 2.89
HOMER3-203ENST00000433218 QRICH2Q9H0J4 1663 aa33.1■■■□□ 2.89
HOMER3-203ENST00000433218 PHRF1Q9P1Y6 1649 aaKnown RBP33.09■■■□□ 2.89
HOMER3-203ENST00000433218 SRCAPQ6ZRS2 3230 aa33.09■■■□□ 2.89
HOMER3-203ENST00000433218 WASLO00401 505 aaPredicted RBP33.08■■■□□ 2.89
HOMER3-203ENST00000433218 LMOD2Q6P5Q4 547 aa33.08■■■□□ 2.89
HOMER3-203ENST00000433218 ARHGEF10O15013 1369 aa33.06■■■□□ 2.88
HOMER3-203ENST00000433218 PSME1Q06323 249 aa33.06■■■□□ 2.88
HOMER3-203ENST00000433218 EIF3AQ14152 1382 aaKnown RBP33.04■■■□□ 2.88
HOMER3-203ENST00000433218 ATAD2Q6PL18 1390 aa33.04■■■□□ 2.88
HOMER3-203ENST00000433218 TRPM1Q7Z4N2 1603 aa33.03■■■□□ 2.88
HOMER3-203ENST00000433218 COL14A1Q05707 1796 aaKnown RBP33.03■■■□□ 2.88
HOMER3-203ENST00000433218 NBPF1Q3BBV0 1214 aa33.02■■■□□ 2.88
HOMER3-203ENST00000433218 UNC5CLQ8IV45 518 aa33.02■■■□□ 2.88
HOMER3-203ENST00000433218 GJD4Q96KN9 370 aaPredicted RBP33.02■■■□□ 2.88
HOMER3-203ENST00000433218 STAC3Q96MF2 364 aa33.02■■■□□ 2.88
HOMER3-203ENST00000433218 HAP1P54257 671 aaPredicted RBP33■■■□□ 2.87
HOMER3-203ENST00000433218 GPRASP1Q5JY77 1395 aa32.95■■■□□ 2.87
HOMER3-203ENST00000433218 FAM83GA6ND36 823 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms