RNA–Protein interactions for RNA: ENST00000430589.1

AC055876.1-201, humanhuman

TSL 2 BASIC

Gene AC055876.1, Length 895 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-201ENST00000430589 NPHP3Q7Z494 1330 aa34.81■■■■□ 3.16
AC055876.1-201ENST00000430589 STK26Q9P289 416 aa34.8■■■■□ 3.16
AC055876.1-201ENST00000430589 TRPC5Q9UL62 973 aaPredicted RBP34.8■■■■□ 3.16
AC055876.1-201ENST00000430589 PPLO60437 1756 aa34.79■■■■□ 3.16
AC055876.1-201ENST00000430589 CCDC144AA2RUR9 1427 aa34.78■■■■□ 3.16
AC055876.1-201ENST00000430589 ADGRF5Q8IZF2 1346 aa34.78■■■■□ 3.16
AC055876.1-201ENST00000430589 FNBP4Q8N3X1 1017 aaPredicted RBP34.75■■■■□ 3.15
AC055876.1-201ENST00000430589 FOXO3O43524 673 aa34.74■■■■□ 3.15
AC055876.1-201ENST00000430589 WAPLQ7Z5K2 1190 aa34.73■■■■□ 3.15
AC055876.1-201ENST00000430589 LRPPRCP42704 1394 aaKnown RBP34.73■■■■□ 3.15
AC055876.1-201ENST00000430589 NUTM2FA1L443 756 aa34.72■■■■□ 3.15
AC055876.1-201ENST00000430589 MPHOSPH9Q99550 1183 aa34.72■■■■□ 3.15
AC055876.1-201ENST00000430589 ANKRD30BQ9BXX2 1392 aa34.72■■■■□ 3.15
AC055876.1-201ENST00000430589 XPCQ01831 940 aaPredicted RBP34.7■■■■□ 3.15
AC055876.1-201ENST00000430589 ATAD2Q6PL18 1390 aa34.7■■■■□ 3.15
AC055876.1-201ENST00000430589 CDC42BPGQ6DT37 1551 aa34.69■■■■□ 3.14
AC055876.1-201ENST00000430589 TMEM132EQ6IEE7 984 aa34.67■■■■□ 3.14
AC055876.1-201ENST00000430589 ABCC11Q96J66 1382 aa34.64■■■■□ 3.14
AC055876.1-201ENST00000430589 COL22A1Q8NFW1 1626 aaPredicted RBP34.63■■■■□ 3.13
AC055876.1-201ENST00000430589 TECPR2O15040 1411 aa34.63■■■■□ 3.13
AC055876.1-201ENST00000430589 SPATA31E1Q6ZUB1 1445 aa34.63■■■■□ 3.13
AC055876.1-201ENST00000430589 MYOM2P54296 1465 aa34.62■■■■□ 3.13
AC055876.1-201ENST00000430589 PXDNQ92626 1479 aa34.62■■■■□ 3.13
AC055876.1-201ENST00000430589 ATRNO75882 1429 aa34.62■■■■□ 3.13
AC055876.1-201ENST00000430589 PLEKHH1Q9ULM0 1364 aa34.57■■■■□ 3.12
AC055876.1-201ENST00000430589 ACIN1Q9UKV3 1341 aaKnown RBP34.55■■■■□ 3.12
AC055876.1-201ENST00000430589 GJD4Q96KN9 370 aaPredicted RBP34.55■■■■□ 3.12
AC055876.1-201ENST00000430589 PIK3C2GO75747 1445 aa34.55■■■■□ 3.12
AC055876.1-201ENST00000430589 YTHDC2Q9H6S0 1430 aaKnown RBP34.55■■■■□ 3.12
AC055876.1-201ENST00000430589 SIRT1Q96EB6 747 aa34.54■■■■□ 3.12
AC055876.1-201ENST00000430589 BCL9LQ86UU0 1499 aa34.53■■■■□ 3.12
AC055876.1-201ENST00000430589 KRT28Q7Z3Y7 464 aa34.53■■■■□ 3.12
AC055876.1-201ENST00000430589 SPATA31A3Q5VYP0 1347 aa34.52■■■■□ 3.12
AC055876.1-201ENST00000430589 HAP1P54257 671 aaPredicted RBP34.51■■■■□ 3.12
AC055876.1-201ENST00000430589 CCDC125Q86Z20 511 aa34.5■■■■□ 3.11
AC055876.1-201ENST00000430589 C14orf93Q9H972 538 aaKnown RBP34.5■■■■□ 3.11
AC055876.1-201ENST00000430589 IFT172Q9UG01 1749 aa34.5■■■■□ 3.11
AC055876.1-201ENST00000430589 PSME1Q06323 249 aa34.49■■■■□ 3.11
AC055876.1-201ENST00000430589 UNC5CLQ8IV45 518 aa34.49■■■■□ 3.11
AC055876.1-201ENST00000430589 DHX57Q6P158 1386 aaKnown RBP34.49■■■■□ 3.11
AC055876.1-201ENST00000430589 KNDC1Q76NI1 1749 aa34.48■■■■□ 3.11
AC055876.1-201ENST00000430589 ZRANB1Q9UGI0 708 aa34.47■■■■□ 3.11
AC055876.1-201ENST00000430589 PHF8Q9UPP1 1060 aa34.47■■■■□ 3.11
AC055876.1-201ENST00000430589 MARF1Q9Y4F3 1742 aaKnown RBP34.45■■■■□ 3.11
AC055876.1-201ENST00000430589 CFAP70Q5T0N1 1121 aa34.45■■■■□ 3.11
AC055876.1-201ENST00000430589 FMN2Q9NZ56 1722 aa34.44■■■■□ 3.1
AC055876.1-201ENST00000430589 KIF1AQ12756 1690 aa34.43■■■■□ 3.1
AC055876.1-201ENST00000430589 SAFB2Q14151 953 aaKnown RBP eCLIP34.42■■■■□ 3.1
AC055876.1-201ENST00000430589 LMOD2Q6P5Q4 547 aa34.41■■■■□ 3.1
AC055876.1-201ENST00000430589 PLEKHG5O94827 1062 aa34.4■■■■□ 3.1
AC055876.1-201ENST00000430589 PRAM1Q96QH2 718 aa34.4■■■■□ 3.1
AC055876.1-201ENST00000430589 POGKQ9P215 609 aa34.4■■■■□ 3.1
AC055876.1-201ENST00000430589 SLIT2O94813 1529 aa34.36■■■■□ 3.09
AC055876.1-201ENST00000430589 RALGAPBQ86X10 1494 aa34.35■■■■□ 3.09
AC055876.1-201ENST00000430589 CABLES1Q8TDN4 633 aa34.35■■■■□ 3.09
AC055876.1-201ENST00000430589 TNS3Q68CZ2 1445 aa34.35■■■■□ 3.09
AC055876.1-201ENST00000430589 CCDC9Q9Y3X0 531 aaKnown RBP34.34■■■■□ 3.09
AC055876.1-201ENST00000430589 EP400Q96L91 3159 aa34.33■■■■□ 3.09
AC055876.1-201ENST00000430589 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.33■■■■□ 3.09
AC055876.1-201ENST00000430589 NRXN1Q9ULB1 1477 aa34.32■■■■□ 3.08
AC055876.1-201ENST00000430589 SRCAPQ6ZRS2 3230 aa34.31■■■■□ 3.08
AC055876.1-201ENST00000430589 SBNO1A3KN83 1393 aa34.31■■■■□ 3.08
AC055876.1-201ENST00000430589 PMFBP1Q8TBY8 1022 aa34.3■■■■□ 3.08
AC055876.1-201ENST00000430589 ARHGEF10O15013 1369 aa34.3■■■■□ 3.08
AC055876.1-201ENST00000430589 USP32Q8NFA0 1604 aa34.3■■■■□ 3.08
AC055876.1-201ENST00000430589 VPS72Q15906 364 aa34.29■■■■□ 3.08
AC055876.1-201ENST00000430589 RGPD8O14715 1765 aaPredicted RBP34.28■■■■□ 3.08
AC055876.1-201ENST00000430589 SF3B2Q13435 895 aaKnown RBP34.28■■■■□ 3.08
AC055876.1-201ENST00000430589 SEPT12Q8IYM1 358 aa34.28■■■■□ 3.08
AC055876.1-201ENST00000430589 TRAK1Q9UPV9 953 aa34.26■■■■□ 3.08
AC055876.1-201ENST00000430589 GLI3P10071 1580 aa34.26■■■■□ 3.07
AC055876.1-201ENST00000430589 BLMP54132 1417 aaPredicted RBP34.24■■■■□ 3.07
AC055876.1-201ENST00000430589 ANKARQ7Z5J8 1434 aa34.23■■■■□ 3.07
AC055876.1-201ENST00000430589 KDM2AQ9Y2K7 1162 aa34.22■■■■□ 3.07
AC055876.1-201ENST00000430589 DLC1Q96QB1 1528 aa34.21■■■■□ 3.07
AC055876.1-201ENST00000430589 HIRIP3Q9BW71 556 aaPredicted RBP34.21■■■■□ 3.07
AC055876.1-201ENST00000430589 RAB3GAP2Q9H2M9 1393 aa34.21■■■■□ 3.07
AC055876.1-201ENST00000430589 A0A0G2JS52 829 aa34.2■■■■□ 3.07
AC055876.1-201ENST00000430589 FAM83GA6ND36 823 aa34.2■■■■□ 3.07
AC055876.1-201ENST00000430589 MYT1Q01538 1121 aa34.2■■■■□ 3.07
AC055876.1-201ENST00000430589 GPRASP1Q5JY77 1395 aa34.2■■■■□ 3.07
AC055876.1-201ENST00000430589 MINK1Q8N4C8 1332 aaPredicted RBP34.19■■■■□ 3.06
AC055876.1-201ENST00000430589 ONECUT3O60422 494 aaPredicted RBP34.18■■■■□ 3.06
AC055876.1-201ENST00000430589 KRT27Q7Z3Y8 459 aa34.18■■■■□ 3.06
AC055876.1-201ENST00000430589 DCAF11Q8TEB1 546 aa34.18■■■■□ 3.06
AC055876.1-201ENST00000430589 EIF3AQ14152 1382 aaKnown RBP34.18■■■■□ 3.06
AC055876.1-201ENST00000430589 DEFB132Q7Z7B7 95 aa34.16■■■■□ 3.06
AC055876.1-201ENST00000430589 NWD2Q9ULI1 1742 aa34.14■■■■□ 3.06
AC055876.1-201ENST00000430589 BRWD3Q6RI45 1802 aa34.12■■■■□ 3.05
AC055876.1-201ENST00000430589 NGDNQ8NEJ9 315 aaKnown RBP34.12■■■■□ 3.05
AC055876.1-201ENST00000430589 STAC3Q96MF2 364 aa34.12■■■■□ 3.05
AC055876.1-201ENST00000430589 BTG4Q9NY30 223 aa34.12■■■■□ 3.05
AC055876.1-201ENST00000430589 PLCH1Q4KWH8 1693 aa34.12■■■■□ 3.05
AC055876.1-201ENST00000430589 WASLO00401 505 aaPredicted RBP34.11■■■■□ 3.05
AC055876.1-201ENST00000430589 PAK3O75914 559 aaPredicted RBP34.1■■■■□ 3.05
AC055876.1-201ENST00000430589 ADGRB1O14514 1584 aa34.09■■■■□ 3.05
AC055876.1-201ENST00000430589 ADGRB2O60241 1585 aa34.09■■■■□ 3.05
AC055876.1-201ENST00000430589 FAM98CQ17RN3 349 aaKnown RBP34.08■■■■□ 3.05
AC055876.1-201ENST00000430589 PRR36Q9H6K5 1346 aa34.06■■■■□ 3.04
AC055876.1-201ENST00000430589 ABCA3Q99758 1704 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms