RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
CRIM1-204ENST00000428774 ROBO2Q9HCK4 1378 aa15.13■□□□□ 0.01
CRIM1-204ENST00000428774 TMF1P82094 1093 aa15.12■□□□□ 0.01
CRIM1-204ENST00000428774 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
CRIM1-204ENST00000428774 PRAM1Q96QH2 718 aa15.12■□□□□ 0.01
CRIM1-204ENST00000428774 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
CRIM1-204ENST00000428774 RBM33Q96EV2 1170 aaKnown RBP15.11■□□□□ 0.01
CRIM1-204ENST00000428774 TOPAZ1Q8N9V7 1692 aa15.1■□□□□ 0.01
CRIM1-204ENST00000428774 KCNA6P17658 529 aa15.1■□□□□ 0.01
CRIM1-204ENST00000428774 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
CRIM1-204ENST00000428774 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
CRIM1-204ENST00000428774 POLR3GLQ9BT43 218 aa15.09■□□□□ 0.01
CRIM1-204ENST00000428774 AMOTL2Q9Y2J4 779 aa15.09■□□□□ 0.01
CRIM1-204ENST00000428774 WAPLQ7Z5K2 1190 aa15.08■□□□□ 0
CRIM1-204ENST00000428774 POGKQ9P215 609 aa15.08■□□□□ 0
CRIM1-204ENST00000428774 FMN2Q9NZ56 1722 aa15.08■□□□□ 0
CRIM1-204ENST00000428774 NKTRP30414 1462 aaKnown RBP15.08■□□□□ 0
CRIM1-204ENST00000428774 USP32Q8NFA0 1604 aa15.07■□□□□ 0
CRIM1-204ENST00000428774 SIRT1Q96EB6 747 aa15.07■□□□□ 0
CRIM1-204ENST00000428774 MINK1Q8N4C8 1332 aaPredicted RBP15.07■□□□□ 0
CRIM1-204ENST00000428774 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
CRIM1-204ENST00000428774 ITSN1Q15811 1721 aa15.06■□□□□ 0
CRIM1-204ENST00000428774 EVC2Q86UK5 1308 aa15.04■□□□□ -0
CRIM1-204ENST00000428774 SLC24A1O60721 1099 aa15.04■□□□□ -0
CRIM1-204ENST00000428774 ATP7BP35670 1465 aa15.03■□□□□ -0
CRIM1-204ENST00000428774 TMEM94Q12767 1356 aa15.03■□□□□ -0
CRIM1-204ENST00000428774 CDCA8Q53HL2 280 aa15.03■□□□□ -0
CRIM1-204ENST00000428774 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
CRIM1-204ENST00000428774 PROSER2Q86WR7 435 aaPredicted RBP15.02■□□□□ -0
CRIM1-204ENST00000428774 AKAP12Q02952 1782 aa15.02□□□□□ -0.01
CRIM1-204ENST00000428774 MON2Q7Z3U7 1717 aa15.01□□□□□ -0.01
CRIM1-204ENST00000428774 ADGRL3Q9HAR2 1447 aa15□□□□□ -0.01
CRIM1-204ENST00000428774 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
CRIM1-204ENST00000428774 CABP2Q9NPB3 220 aa15□□□□□ -0.01
CRIM1-204ENST00000428774 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
CRIM1-204ENST00000428774 NRKQ7Z2Y5 1582 aa14.98□□□□□ -0.01
CRIM1-204ENST00000428774 CD163L1Q9NR16 1453 aa14.98□□□□□ -0.01
CRIM1-204ENST00000428774 KIF20BQ96Q89 1820 aa14.98□□□□□ -0.01
CRIM1-204ENST00000428774 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
CRIM1-204ENST00000428774 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
CRIM1-204ENST00000428774 CERKQ8TCT0 537 aa14.97□□□□□ -0.01
CRIM1-204ENST00000428774 CDK19Q9BWU1 502 aa14.97□□□□□ -0.01
CRIM1-204ENST00000428774 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
CRIM1-204ENST00000428774 NINLQ9Y2I6 1382 aa14.97□□□□□ -0.01
CRIM1-204ENST00000428774 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.01
CRIM1-204ENST00000428774 MIER1Q8N108 512 aa14.95□□□□□ -0.02
CRIM1-204ENST00000428774 PPIP5K1Q6PFW1 1433 aa14.94□□□□□ -0.02
CRIM1-204ENST00000428774 PANK3Q9H999 370 aa14.94□□□□□ -0.02
CRIM1-204ENST00000428774 ANKRD36BQ8N2N9 1353 aa14.94□□□□□ -0.02
CRIM1-204ENST00000428774 ANKARQ7Z5J8 1434 aa14.93□□□□□ -0.02
CRIM1-204ENST00000428774 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
CRIM1-204ENST00000428774 A0A1W2PP64 1363 aa14.93□□□□□ -0.02
CRIM1-204ENST00000428774 IQSEC2Q5JU85 1478 aa14.93□□□□□ -0.02
CRIM1-204ENST00000428774 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
CRIM1-204ENST00000428774 PER1O15534 1290 aaPredicted RBP14.92□□□□□ -0.02
CRIM1-204ENST00000428774 SLC12A5Q9H2X9 1139 aa14.92□□□□□ -0.02
CRIM1-204ENST00000428774 MSH6P52701 1360 aa14.91□□□□□ -0.02
CRIM1-204ENST00000428774 TMC1Q8TDI8 760 aa14.91□□□□□ -0.02
CRIM1-204ENST00000428774 NCOA3Q9Y6Q9 1424 aa14.91□□□□□ -0.02
CRIM1-204ENST00000428774 ANP32CO43423 234 aa14.9□□□□□ -0.02
CRIM1-204ENST00000428774 DCCP43146 1447 aa14.9□□□□□ -0.02
CRIM1-204ENST00000428774 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
CRIM1-204ENST00000428774 KIF1AQ12756 1690 aa14.9□□□□□ -0.02
CRIM1-204ENST00000428774 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
CRIM1-204ENST00000428774 MST1RQ04912 1400 aa14.89□□□□□ -0.03
CRIM1-204ENST00000428774 PARD3Q8TEW0 1356 aa14.88□□□□□ -0.03
CRIM1-204ENST00000428774 ROBO1Q9Y6N7 1651 aa14.88□□□□□ -0.03
CRIM1-204ENST00000428774 NUTM2FA1L443 756 aa14.88□□□□□ -0.03
CRIM1-204ENST00000428774 CARD14Q9BXL6 1004 aa14.88□□□□□ -0.03
CRIM1-204ENST00000428774 C19orf44Q9H6X5 657 aa14.87□□□□□ -0.03
CRIM1-204ENST00000428774 PRKRIP1Q9H875 184 aaPredicted RBP14.87□□□□□ -0.03
CRIM1-204ENST00000428774 CABP1Q9NZU7 370 aa14.87□□□□□ -0.03
CRIM1-204ENST00000428774 KTN1Q86UP2 1357 aaKnown RBP14.86□□□□□ -0.03
CRIM1-204ENST00000428774 NPC1L1Q9UHC9 1359 aa14.86□□□□□ -0.03
CRIM1-204ENST00000428774 UBAP1LF5GYI3 381 aa14.86□□□□□ -0.03
CRIM1-204ENST00000428774 AMER1Q5JTC6 1135 aaPredicted RBP14.86□□□□□ -0.03
CRIM1-204ENST00000428774 CCDC61Q9Y6R9 512 aa14.86□□□□□ -0.03
CRIM1-204ENST00000428774 MARF1Q9Y4F3 1742 aaKnown RBP14.85□□□□□ -0.03
CRIM1-204ENST00000428774 EDC4Q6P2E9 1401 aaKnown RBP14.84□□□□□ -0.03
CRIM1-204ENST00000428774 USP54Q70EL1 1684 aa14.84□□□□□ -0.03
CRIM1-204ENST00000428774 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
CRIM1-204ENST00000428774 ATF3P18847 181 aa14.84□□□□□ -0.03
CRIM1-204ENST00000428774 TERF2IPQ9NYB0 399 aa14.84□□□□□ -0.03
CRIM1-204ENST00000428774 KNSTRNQ9Y448 316 aa14.84□□□□□ -0.03
CRIM1-204ENST00000428774 POLR3AO14802 1390 aaPredicted RBP14.84□□□□□ -0.03
CRIM1-204ENST00000428774 PIK3C2AO00443 1686 aa14.84□□□□□ -0.03
CRIM1-204ENST00000428774 USP6P35125 1406 aa14.83□□□□□ -0.03
CRIM1-204ENST00000428774 TRPM3Q9HCF6 1732 aaPredicted RBP14.83□□□□□ -0.03
CRIM1-204ENST00000428774 PIP4K2BP78356 416 aa14.83□□□□□ -0.04
CRIM1-204ENST00000428774 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
CRIM1-204ENST00000428774 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.04
CRIM1-204ENST00000428774 CC2D1BQ5T0F9 858 aaKnown RBP14.82□□□□□ -0.04
CRIM1-204ENST00000428774 NSD2O96028 1365 aa14.82□□□□□ -0.04
CRIM1-204ENST00000428774 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
CRIM1-204ENST00000428774 PLEKHG3A1L390 1219 aa14.81□□□□□ -0.04
CRIM1-204ENST00000428774 CADPS2Q86UW7 1296 aa14.81□□□□□ -0.04
CRIM1-204ENST00000428774 ORAI2Q96SN7 254 aa14.81□□□□□ -0.04
CRIM1-204ENST00000428774 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
CRIM1-204ENST00000428774 SSH2Q76I76 1423 aa14.81□□□□□ -0.04
CRIM1-204ENST00000428774 SLAIN2Q9P270 581 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms