RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 WAPLQ7Z5K2 1190 aa19.18■□□□□ 0.66
PHF1-205ENST00000428274 DCAF11Q8TEB1 546 aa19.18■□□□□ 0.66
PHF1-205ENST00000428274 SIRT1Q96EB6 747 aa19.18■□□□□ 0.66
PHF1-205ENST00000428274 NHSL1Q5SYE7 1610 aa19.17■□□□□ 0.66
PHF1-205ENST00000428274 CDC42BPGQ6DT37 1551 aa19.16■□□□□ 0.66
PHF1-205ENST00000428274 ORAI2Q96SN7 254 aa19.16■□□□□ 0.66
PHF1-205ENST00000428274 PLEKHH1Q9ULM0 1364 aa19.16■□□□□ 0.66
PHF1-205ENST00000428274 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
PHF1-205ENST00000428274 ADGRB1O14514 1584 aa19.15■□□□□ 0.66
PHF1-205ENST00000428274 NUTM2BA6NNL0 878 aaPredicted RBP19.14■□□□□ 0.65
PHF1-205ENST00000428274 NUTM2EB1AL46 878 aaPredicted RBP19.14■□□□□ 0.65
PHF1-205ENST00000428274 NUTM2AQ8IVF1 878 aaPredicted RBP19.14■□□□□ 0.65
PHF1-205ENST00000428274 SPATA31A6Q5VVP1 1343 aa19.14■□□□□ 0.65
PHF1-205ENST00000428274 SHPRHQ149N8 1683 aa19.12■□□□□ 0.65
PHF1-205ENST00000428274 DLC1Q96QB1 1528 aa19.11■□□□□ 0.65
PHF1-205ENST00000428274 MEX3CQ5U5Q3 659 aaKnown RBP19.09■□□□□ 0.65
PHF1-205ENST00000428274 LRRC59Q96AG4 307 aaKnown RBP19.08■□□□□ 0.64
PHF1-205ENST00000428274 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.64
PHF1-205ENST00000428274 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
PHF1-205ENST00000428274 PRAM1Q96QH2 718 aa19.07■□□□□ 0.64
PHF1-205ENST00000428274 SOS2Q07890 1332 aaPredicted RBP19.06■□□□□ 0.64
PHF1-205ENST00000428274 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
PHF1-205ENST00000428274 TRIM26Q12899 539 aaPredicted RBP19.05■□□□□ 0.64
PHF1-205ENST00000428274 KIAA1210Q9ULL0 1709 aa19.05■□□□□ 0.64
PHF1-205ENST00000428274 ESCO1Q5FWF5 840 aa19.04■□□□□ 0.64
PHF1-205ENST00000428274 TRAK1Q9UPV9 953 aa19.04■□□□□ 0.64
PHF1-205ENST00000428274 POGKQ9P215 609 aa19.03■□□□□ 0.64
PHF1-205ENST00000428274 RGPD8O14715 1765 aaPredicted RBP19.03■□□□□ 0.64
PHF1-205ENST00000428274 AFF2P51816 1311 aa19.02■□□□□ 0.64
PHF1-205ENST00000428274 XPCQ01831 940 aaPredicted RBP19.02■□□□□ 0.64
PHF1-205ENST00000428274 SAFB2Q14151 953 aaKnown RBP eCLIP19.02■□□□□ 0.64
PHF1-205ENST00000428274 SIN3AQ96ST3 1273 aa19.02■□□□□ 0.64
PHF1-205ENST00000428274 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
PHF1-205ENST00000428274 ADGRB2O60241 1585 aa19.01■□□□□ 0.63
PHF1-205ENST00000428274 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
PHF1-205ENST00000428274 ADAMTS2O95450 1211 aa19■□□□□ 0.63
PHF1-205ENST00000428274 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
PHF1-205ENST00000428274 C8orf37Q96NL8 207 aa19■□□□□ 0.63
PHF1-205ENST00000428274 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
PHF1-205ENST00000428274 PXDNQ92626 1479 aa18.99■□□□□ 0.63
PHF1-205ENST00000428274 FOXO3O43524 673 aa18.99■□□□□ 0.63
PHF1-205ENST00000428274 KIF1AQ12756 1690 aa18.98■□□□□ 0.63
PHF1-205ENST00000428274 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
PHF1-205ENST00000428274 USP32Q8NFA0 1604 aa18.96■□□□□ 0.63
PHF1-205ENST00000428274 ANKARQ7Z5J8 1434 aa18.95■□□□□ 0.62
PHF1-205ENST00000428274 RXRBP28702 533 aa18.95■□□□□ 0.62
PHF1-205ENST00000428274 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
PHF1-205ENST00000428274 COL22A1Q8NFW1 1626 aaPredicted RBP18.95■□□□□ 0.62
PHF1-205ENST00000428274 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
PHF1-205ENST00000428274 NEUROD1Q13562 356 aa18.94■□□□□ 0.62
PHF1-205ENST00000428274 PHF8Q9UPP1 1060 aa18.94■□□□□ 0.62
PHF1-205ENST00000428274 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
PHF1-205ENST00000428274 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
PHF1-205ENST00000428274 QTRT2Q9H974 415 aaKnown RBP18.93■□□□□ 0.62
PHF1-205ENST00000428274 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
PHF1-205ENST00000428274 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
PHF1-205ENST00000428274 KRT28Q7Z3Y7 464 aa18.9■□□□□ 0.62
PHF1-205ENST00000428274 UPF1Q92900 1129 aaKnown RBP eCLIP18.9■□□□□ 0.62
PHF1-205ENST00000428274 EIF3AQ14152 1382 aaKnown RBP18.9■□□□□ 0.62
PHF1-205ENST00000428274 SPATA31A3Q5VYP0 1347 aa18.89■□□□□ 0.61
PHF1-205ENST00000428274 TRPM1Q7Z4N2 1603 aa18.89■□□□□ 0.61
PHF1-205ENST00000428274 FNBP4Q8N3X1 1017 aaPredicted RBP18.87■□□□□ 0.61
PHF1-205ENST00000428274 RBM6P78332 1123 aaKnown RBP18.86■□□□□ 0.61
PHF1-205ENST00000428274 PSME1Q06323 249 aa18.86■□□□□ 0.61
PHF1-205ENST00000428274 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
PHF1-205ENST00000428274 USP21Q9UK80 565 aa18.86■□□□□ 0.61
PHF1-205ENST00000428274 RGS12O14924 1447 aa18.85■□□□□ 0.61
PHF1-205ENST00000428274 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
PHF1-205ENST00000428274 ATP7BP35670 1465 aa18.84■□□□□ 0.61
PHF1-205ENST00000428274 MARF1Q9Y4F3 1742 aaKnown RBP18.84■□□□□ 0.61
PHF1-205ENST00000428274 CDK19Q9BWU1 502 aa18.84■□□□□ 0.61
PHF1-205ENST00000428274 TNS3Q68CZ2 1445 aa18.83■□□□□ 0.61
PHF1-205ENST00000428274 ITSN1Q15811 1721 aa18.83■□□□□ 0.61
PHF1-205ENST00000428274 CENPJQ9HC77 1338 aaPredicted RBP18.83■□□□□ 0.61
PHF1-205ENST00000428274 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
PHF1-205ENST00000428274 CABLES1Q8TDN4 633 aa18.83■□□□□ 0.6
PHF1-205ENST00000428274 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.6
PHF1-205ENST00000428274 CDK12Q9NYV4 1490 aaPredicted RBP18.83■□□□□ 0.6
PHF1-205ENST00000428274 TRPM3Q9HCF6 1732 aaPredicted RBP18.83■□□□□ 0.6
PHF1-205ENST00000428274 PLEKHG5O94827 1062 aa18.82■□□□□ 0.6
PHF1-205ENST00000428274 BCL9LQ86UU0 1499 aa18.82■□□□□ 0.6
PHF1-205ENST00000428274 QRICH2Q9H0J4 1663 aa18.8■□□□□ 0.6
PHF1-205ENST00000428274 ATRNO75882 1429 aa18.8■□□□□ 0.6
PHF1-205ENST00000428274 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
PHF1-205ENST00000428274 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
PHF1-205ENST00000428274 TOPAZ1Q8N9V7 1692 aa18.79■□□□□ 0.6
PHF1-205ENST00000428274 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
PHF1-205ENST00000428274 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
PHF1-205ENST00000428274 ARHGEF10O15013 1369 aa18.79■□□□□ 0.6
PHF1-205ENST00000428274 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
PHF1-205ENST00000428274 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
PHF1-205ENST00000428274 NGDNQ8NEJ9 315 aaKnown RBP18.78■□□□□ 0.6
PHF1-205ENST00000428274 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
PHF1-205ENST00000428274 ABCA3Q99758 1704 aa18.76■□□□□ 0.59
PHF1-205ENST00000428274 POLR3AO14802 1390 aaPredicted RBP18.76■□□□□ 0.59
PHF1-205ENST00000428274 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
PHF1-205ENST00000428274 RALGAPBQ86X10 1494 aa18.73■□□□□ 0.59
PHF1-205ENST00000428274 SRPK2P78362 688 aaKnown RBP18.73■□□□□ 0.59
PHF1-205ENST00000428274 GJD4Q96KN9 370 aaPredicted RBP18.73■□□□□ 0.59
PHF1-205ENST00000428274 CABP2Q9NPB3 220 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms