RNA–Protein interactions for RNA: ENST00000427982.5

GDNF-204, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-204ENST00000427982 YTHDC2Q9H6S0 1430 aaKnown RBP32.02■■■□□ 2.72
GDNF-204ENST00000427982 MEX3CQ5U5Q3 659 aaKnown RBP32.02■■■□□ 2.72
GDNF-204ENST00000427982 TMEM132EQ6IEE7 984 aa32.02■■■□□ 2.72
GDNF-204ENST00000427982 SOS2Q07890 1332 aaPredicted RBP32.01■■■□□ 2.72
GDNF-204ENST00000427982 PLEKHH1Q9ULM0 1364 aa31.99■■■□□ 2.71
GDNF-204ENST00000427982 WAPLQ7Z5K2 1190 aa31.99■■■□□ 2.71
GDNF-204ENST00000427982 STK26Q9P289 416 aa31.99■■■□□ 2.71
GDNF-204ENST00000427982 COL22A1Q8NFW1 1626 aaPredicted RBP31.99■■■□□ 2.71
GDNF-204ENST00000427982 NUTM2BA6NNL0 878 aaPredicted RBP31.98■■■□□ 2.71
GDNF-204ENST00000427982 NUTM2EB1AL46 878 aaPredicted RBP31.98■■■□□ 2.71
GDNF-204ENST00000427982 NUTM2AQ8IVF1 878 aaPredicted RBP31.98■■■□□ 2.71
GDNF-204ENST00000427982 C14orf93Q9H972 538 aaKnown RBP31.98■■■□□ 2.71
GDNF-204ENST00000427982 RGPD8O14715 1765 aaPredicted RBP31.98■■■□□ 2.71
GDNF-204ENST00000427982 ZNF772Q68DY9 489 aaPredicted RBP31.97■■■□□ 2.71
GDNF-204ENST00000427982 PXDNQ92626 1479 aa31.93■■■□□ 2.7
GDNF-204ENST00000427982 HRCP23327 699 aa31.93■■■□□ 2.7
GDNF-204ENST00000427982 CFAP70Q5T0N1 1121 aa31.91■■■□□ 2.7
GDNF-204ENST00000427982 SIRT1Q96EB6 747 aa31.91■■■□□ 2.7
GDNF-204ENST00000427982 KIF1AQ12756 1690 aa31.9■■■□□ 2.7
GDNF-204ENST00000427982 ADGRB1O14514 1584 aa31.9■■■□□ 2.7
GDNF-204ENST00000427982 MARF1Q9Y4F3 1742 aaKnown RBP31.89■■■□□ 2.7
GDNF-204ENST00000427982 AFF2P51816 1311 aa31.89■■■□□ 2.7
GDNF-204ENST00000427982 DLC1Q96QB1 1528 aa31.87■■■□□ 2.69
GDNF-204ENST00000427982 ESCO1Q5FWF5 840 aa31.87■■■□□ 2.69
GDNF-204ENST00000427982 DHX57Q6P158 1386 aaKnown RBP31.86■■■□□ 2.69
GDNF-204ENST00000427982 NPHP3Q7Z494 1330 aa31.86■■■□□ 2.69
GDNF-204ENST00000427982 CDK12Q9NYV4 1490 aaPredicted RBP31.84■■■□□ 2.69
GDNF-204ENST00000427982 ADGRB2O60241 1585 aa31.81■■■□□ 2.68
GDNF-204ENST00000427982 NUTM2FA1L443 756 aa31.81■■■□□ 2.68
GDNF-204ENST00000427982 C8orf37Q96NL8 207 aa31.81■■■□□ 2.68
GDNF-204ENST00000427982 USP32Q8NFA0 1604 aa31.8■■■□□ 2.68
GDNF-204ENST00000427982 FOXO3O43524 673 aa31.79■■■□□ 2.68
GDNF-204ENST00000427982 RXRBP28702 533 aa31.78■■■□□ 2.68
GDNF-204ENST00000427982 ADAMTS2O95450 1211 aa31.76■■■□□ 2.67
GDNF-204ENST00000427982 PRAM1Q96QH2 718 aa31.75■■■□□ 2.67
GDNF-204ENST00000427982 XPCQ01831 940 aaPredicted RBP31.74■■■□□ 2.67
GDNF-204ENST00000427982 ARHGEF28Q8N1W1 1705 aaKnown RBP31.73■■■□□ 2.67
GDNF-204ENST00000427982 DCAF11Q8TEB1 546 aa31.73■■■□□ 2.67
GDNF-204ENST00000427982 STAC3Q96MF2 364 aa31.72■■■□□ 2.67
GDNF-204ENST00000427982 NGLY1Q96IV0 654 aa31.71■■■□□ 2.67
GDNF-204ENST00000427982 RGS12O14924 1447 aa31.7■■■□□ 2.67
GDNF-204ENST00000427982 QTRT2Q9H974 415 aaKnown RBP31.7■■■□□ 2.67
GDNF-204ENST00000427982 KDM2AQ9Y2K7 1162 aa31.69■■■□□ 2.66
GDNF-204ENST00000427982 SAFB2Q14151 953 aaKnown RBP eCLIP31.68■■■□□ 2.66
GDNF-204ENST00000427982 FNBP4Q8N3X1 1017 aaPredicted RBP31.68■■■□□ 2.66
GDNF-204ENST00000427982 ABCA3Q99758 1704 aa31.67■■■□□ 2.66
GDNF-204ENST00000427982 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.67■■■□□ 2.66
GDNF-204ENST00000427982 KIAA1210Q9ULL0 1709 aa31.67■■■□□ 2.66
GDNF-204ENST00000427982 RBM6P78332 1123 aaKnown RBP31.67■■■□□ 2.66
GDNF-204ENST00000427982 SPATA31A3Q5VYP0 1347 aa31.67■■■□□ 2.66
GDNF-204ENST00000427982 ANKARQ7Z5J8 1434 aa31.66■■■□□ 2.66
GDNF-204ENST00000427982 PHF8Q9UPP1 1060 aa31.65■■■□□ 2.66
GDNF-204ENST00000427982 UPF1Q92900 1129 aaKnown RBP eCLIP31.64■■■□□ 2.66
GDNF-204ENST00000427982 POGKQ9P215 609 aa31.64■■■□□ 2.66
GDNF-204ENST00000427982 TRAK1Q9UPV9 953 aa31.64■■■□□ 2.66
GDNF-204ENST00000427982 TRPM3Q9HCF6 1732 aaPredicted RBP31.63■■■□□ 2.65
GDNF-204ENST00000427982 ATRNO75882 1429 aa31.63■■■□□ 2.65
GDNF-204ENST00000427982 KRT28Q7Z3Y7 464 aa31.62■■■□□ 2.65
GDNF-204ENST00000427982 BCL9LQ86UU0 1499 aa31.62■■■□□ 2.65
GDNF-204ENST00000427982 USP21Q9UK80 565 aa31.62■■■□□ 2.65
GDNF-204ENST00000427982 TNS3Q68CZ2 1445 aa31.61■■■□□ 2.65
GDNF-204ENST00000427982 TULP4Q9NRJ4 1543 aa31.59■■■□□ 2.65
GDNF-204ENST00000427982 TRPC5Q9UL62 973 aaPredicted RBP31.57■■■□□ 2.64
GDNF-204ENST00000427982 ITSN1Q15811 1721 aa31.57■■■□□ 2.64
GDNF-204ENST00000427982 ALS2Q96Q42 1657 aa31.57■■■□□ 2.64
GDNF-204ENST00000427982 SBNO1A3KN83 1393 aa31.56■■■□□ 2.64
GDNF-204ENST00000427982 HIRIP3Q9BW71 556 aaPredicted RBP31.55■■■□□ 2.64
GDNF-204ENST00000427982 SLIT2O94813 1529 aa31.54■■■□□ 2.64
GDNF-204ENST00000427982 PLCH1Q4KWH8 1693 aa31.54■■■□□ 2.64
GDNF-204ENST00000427982 PRR36Q9H6K5 1346 aa31.54■■■□□ 2.64
GDNF-204ENST00000427982 MINK1Q8N4C8 1332 aaPredicted RBP31.53■■■□□ 2.64
GDNF-204ENST00000427982 NWD2Q9ULI1 1742 aa31.52■■■□□ 2.64
GDNF-204ENST00000427982 PSME1Q06323 249 aa31.52■■■□□ 2.64
GDNF-204ENST00000427982 EIF3AQ14152 1382 aaKnown RBP31.52■■■□□ 2.64
GDNF-204ENST00000427982 EP400Q96L91 3159 aa31.51■■■□□ 2.64
GDNF-204ENST00000427982 CRYBG1Q9Y4K1 1723 aa31.51■■■□□ 2.63
GDNF-204ENST00000427982 WASLO00401 505 aaPredicted RBP31.5■■■□□ 2.63
GDNF-204ENST00000427982 PMFBP1Q8TBY8 1022 aa31.5■■■□□ 2.63
GDNF-204ENST00000427982 GLI3P10071 1580 aa31.48■■■□□ 2.63
GDNF-204ENST00000427982 TOPAZ1Q8N9V7 1692 aa31.48■■■□□ 2.63
GDNF-204ENST00000427982 ATP7BP35670 1465 aa31.47■■■□□ 2.63
GDNF-204ENST00000427982 ARHGEF10O15013 1369 aa31.47■■■□□ 2.63
GDNF-204ENST00000427982 CABLES1Q8TDN4 633 aa31.44■■■□□ 2.62
GDNF-204ENST00000427982 BRWD3Q6RI45 1802 aa31.43■■■□□ 2.62
GDNF-204ENST00000427982 NRAPQ86VF7 1730 aa31.41■■■□□ 2.62
GDNF-204ENST00000427982 UNC5CLQ8IV45 518 aa31.41■■■□□ 2.62
GDNF-204ENST00000427982 GJD4Q96KN9 370 aaPredicted RBP31.41■■■□□ 2.62
GDNF-204ENST00000427982 RALGAPBQ86X10 1494 aa31.4■■■□□ 2.62
GDNF-204ENST00000427982 NBPF1Q3BBV0 1214 aa31.38■■■□□ 2.61
GDNF-204ENST00000427982 GPRASP1Q5JY77 1395 aa31.38■■■□□ 2.61
GDNF-204ENST00000427982 ATAD2Q6PL18 1390 aa31.38■■■□□ 2.61
GDNF-204ENST00000427982 LMOD2Q6P5Q4 547 aa31.36■■■□□ 2.61
GDNF-204ENST00000427982 QRICH2Q9H0J4 1663 aa31.35■■■□□ 2.61
GDNF-204ENST00000427982 COL14A1Q05707 1796 aaKnown RBP31.35■■■□□ 2.61
GDNF-204ENST00000427982 TRPM1Q7Z4N2 1603 aa31.35■■■□□ 2.61
GDNF-204ENST00000427982 HAP1P54257 671 aaPredicted RBP31.34■■■□□ 2.61
GDNF-204ENST00000427982 NUDT16Q96DE0 195 aaKnown RBP31.34■■■□□ 2.61
GDNF-204ENST00000427982 PHRF1Q9P1Y6 1649 aaKnown RBP31.32■■■□□ 2.6
GDNF-204ENST00000427982 PLEKHG5O94827 1062 aa31.31■■■□□ 2.6
GDNF-204ENST00000427982 CDK19Q9BWU1 502 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms