RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 POGKQ9P215 609 aa16.75■□□□□ 0.27
RFC4-206ENST00000427785 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
RFC4-206ENST00000427785 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
RFC4-206ENST00000427785 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
RFC4-206ENST00000427785 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
RFC4-206ENST00000427785 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
RFC4-206ENST00000427785 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
RFC4-206ENST00000427785 CDCA8Q53HL2 280 aa16.7■□□□□ 0.26
RFC4-206ENST00000427785 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
RFC4-206ENST00000427785 EVC2Q86UK5 1308 aa16.7■□□□□ 0.26
RFC4-206ENST00000427785 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
RFC4-206ENST00000427785 AMOTL2Q9Y2J4 779 aa16.69■□□□□ 0.26
RFC4-206ENST00000427785 FMN2Q9NZ56 1722 aa16.68■□□□□ 0.26
RFC4-206ENST00000427785 MIER1Q8N108 512 aa16.68■□□□□ 0.26
RFC4-206ENST00000427785 USP32Q8NFA0 1604 aa16.67■□□□□ 0.26
RFC4-206ENST00000427785 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
RFC4-206ENST00000427785 KCNA6P17658 529 aa16.66■□□□□ 0.26
RFC4-206ENST00000427785 AKAP12Q02952 1782 aa16.66■□□□□ 0.26
RFC4-206ENST00000427785 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
RFC4-206ENST00000427785 CABP2Q9NPB3 220 aa16.65■□□□□ 0.26
RFC4-206ENST00000427785 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
RFC4-206ENST00000427785 XIRP1Q702N8 1843 aaKnown RBP16.65■□□□□ 0.26
RFC4-206ENST00000427785 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
RFC4-206ENST00000427785 SRPK2P78362 688 aaKnown RBP16.64■□□□□ 0.25
RFC4-206ENST00000427785 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
RFC4-206ENST00000427785 ATP7BP35670 1465 aa16.63■□□□□ 0.25
RFC4-206ENST00000427785 MON2Q7Z3U7 1717 aa16.63■□□□□ 0.25
RFC4-206ENST00000427785 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
RFC4-206ENST00000427785 ANP32CO43423 234 aa16.61■□□□□ 0.25
RFC4-206ENST00000427785 CDK19Q9BWU1 502 aa16.61■□□□□ 0.25
RFC4-206ENST00000427785 PANK3Q9H999 370 aa16.61■□□□□ 0.25
RFC4-206ENST00000427785 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
RFC4-206ENST00000427785 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
RFC4-206ENST00000427785 WASLO00401 505 aaPredicted RBP16.59■□□□□ 0.25
RFC4-206ENST00000427785 CNGB1Q14028 1251 aaPredicted RBP16.59■□□□□ 0.25
RFC4-206ENST00000427785 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
RFC4-206ENST00000427785 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
RFC4-206ENST00000427785 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
RFC4-206ENST00000427785 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.24
RFC4-206ENST00000427785 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.24
RFC4-206ENST00000427785 NRKQ7Z2Y5 1582 aa16.57■□□□□ 0.24
RFC4-206ENST00000427785 SLC12A5Q9H2X9 1139 aa16.57■□□□□ 0.24
RFC4-206ENST00000427785 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
RFC4-206ENST00000427785 A0A1W2PP64 1363 aa16.56■□□□□ 0.24
RFC4-206ENST00000427785 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
RFC4-206ENST00000427785 PRR36Q9H6K5 1346 aa16.56■□□□□ 0.24
RFC4-206ENST00000427785 RBM33Q96EV2 1170 aaKnown RBP16.56■□□□□ 0.24
RFC4-206ENST00000427785 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
RFC4-206ENST00000427785 PER1O15534 1290 aaPredicted RBP16.53■□□□□ 0.24
RFC4-206ENST00000427785 PRKRIP1Q9H875 184 aaPredicted RBP16.53■□□□□ 0.24
RFC4-206ENST00000427785 NUTM2FA1L443 756 aa16.52■□□□□ 0.24
RFC4-206ENST00000427785 NUDT16Q96DE0 195 aaKnown RBP16.52■□□□□ 0.24
RFC4-206ENST00000427785 ANKARQ7Z5J8 1434 aa16.52■□□□□ 0.23
RFC4-206ENST00000427785 CC2D1BQ5T0F9 858 aaKnown RBP16.51■□□□□ 0.23
RFC4-206ENST00000427785 CARD14Q9BXL6 1004 aa16.51■□□□□ 0.23
RFC4-206ENST00000427785 KNSTRNQ9Y448 316 aa16.51■□□□□ 0.23
RFC4-206ENST00000427785 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
RFC4-206ENST00000427785 ZNF335Q9H4Z2 1342 aaPredicted RBP16.5■□□□□ 0.23
RFC4-206ENST00000427785 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
RFC4-206ENST00000427785 PROSER2Q86WR7 435 aaPredicted RBP16.5■□□□□ 0.23
RFC4-206ENST00000427785 TMEM94Q12767 1356 aa16.5■□□□□ 0.23
RFC4-206ENST00000427785 CABP1Q9NZU7 370 aa16.49■□□□□ 0.23
RFC4-206ENST00000427785 AMER1Q5JTC6 1135 aaPredicted RBP16.48■□□□□ 0.23
RFC4-206ENST00000427785 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
RFC4-206ENST00000427785 LRRC7Q96NW7 1537 aa16.48■□□□□ 0.23
RFC4-206ENST00000427785 CPSF1Q10570 1443 aaKnown RBP16.47■□□□□ 0.23
RFC4-206ENST00000427785 TERF2IPQ9NYB0 399 aa16.47■□□□□ 0.23
RFC4-206ENST00000427785 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
RFC4-206ENST00000427785 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
RFC4-206ENST00000427785 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.23
RFC4-206ENST00000427785 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
RFC4-206ENST00000427785 DCCP43146 1447 aa16.45■□□□□ 0.22
RFC4-206ENST00000427785 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
RFC4-206ENST00000427785 CGNL1Q0VF96 1302 aa16.44■□□□□ 0.22
RFC4-206ENST00000427785 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
RFC4-206ENST00000427785 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
RFC4-206ENST00000427785 MARF1Q9Y4F3 1742 aaKnown RBP16.43■□□□□ 0.22
RFC4-206ENST00000427785 RALBP1Q15311 655 aa16.43■□□□□ 0.22
RFC4-206ENST00000427785 USP6P35125 1406 aa16.43■□□□□ 0.22
RFC4-206ENST00000427785 NCOA3Q9Y6Q9 1424 aa16.43■□□□□ 0.22
RFC4-206ENST00000427785 NSD2O96028 1365 aa16.42■□□□□ 0.22
RFC4-206ENST00000427785 CCDC184Q52MB2 194 aa16.42■□□□□ 0.22
RFC4-206ENST00000427785 PMFBP1Q8TBY8 1022 aa16.41■□□□□ 0.22
RFC4-206ENST00000427785 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
RFC4-206ENST00000427785 MST1RQ04912 1400 aa16.41■□□□□ 0.22
RFC4-206ENST00000427785 ACEP12821 1306 aa16.41■□□□□ 0.22
RFC4-206ENST00000427785 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
RFC4-206ENST00000427785 USP54Q70EL1 1684 aa16.4■□□□□ 0.22
RFC4-206ENST00000427785 POLR3AO14802 1390 aaPredicted RBP16.4■□□□□ 0.22
RFC4-206ENST00000427785 MSH6P52701 1360 aa16.4■□□□□ 0.22
RFC4-206ENST00000427785 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
RFC4-206ENST00000427785 LTBP4Q8N2S1 1624 aa16.4■□□□□ 0.22
RFC4-206ENST00000427785 C1orf167Q5SNV9 1468 aa16.4■□□□□ 0.22
RFC4-206ENST00000427785 PLEKHG3A1L390 1219 aa16.39■□□□□ 0.21
RFC4-206ENST00000427785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
RFC4-206ENST00000427785 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
RFC4-206ENST00000427785 YTHDC1Q96MU7 727 aaKnown RBP16.38■□□□□ 0.21
RFC4-206ENST00000427785 C19orf44Q9H6X5 657 aa16.38■□□□□ 0.21
RFC4-206ENST00000427785 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
RFC4-206ENST00000427785 BRD4O60885 1362 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms