RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
RARA-206ENST00000425707 FAM43AQ8N2R8 423 aa22.2■■□□□ 1.14
RARA-206ENST00000425707 RUNDC1Q96C34 613 aa22.2■■□□□ 1.14
RARA-206ENST00000425707 FANCAO15360 1455 aa22.2■■□□□ 1.14
RARA-206ENST00000425707 MROH2AA6NES4 1674 aa22.19■■□□□ 1.14
RARA-206ENST00000425707 ADGRL1O94910 1474 aa22.19■■□□□ 1.14
RARA-206ENST00000425707 RARSP54136 660 aaKnown RBP22.18■■□□□ 1.14
RARA-206ENST00000425707 ADGRB3O60242 1522 aa22.18■■□□□ 1.14
RARA-206ENST00000425707 CANXP27824 592 aaKnown RBP22.18■■□□□ 1.14
RARA-206ENST00000425707 CFAP70Q5T0N1 1121 aa22.17■■□□□ 1.14
RARA-206ENST00000425707 UPF2Q9HAU5 1272 aaKnown RBP22.16■■□□□ 1.14
RARA-206ENST00000425707 COG6Q9Y2V7 657 aa22.16■■□□□ 1.14
RARA-206ENST00000425707 QRICH2Q9H0J4 1663 aa22.16■■□□□ 1.14
RARA-206ENST00000425707 PANK1Q8TE04 598 aa22.15■■□□□ 1.14
RARA-206ENST00000425707 ANTXR1Q9H6X2 564 aa22.15■■□□□ 1.14
RARA-206ENST00000425707 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
RARA-206ENST00000425707 TBC1D32Q96NH3 1257 aa22.15■■□□□ 1.14
RARA-206ENST00000425707 PUS7Q96PZ0 661 aaKnown RBP22.15■■□□□ 1.14
RARA-206ENST00000425707 ADGRF5Q8IZF2 1346 aa22.14■■□□□ 1.14
RARA-206ENST00000425707 AFAP1Q8N556 730 aa22.14■■□□□ 1.13
RARA-206ENST00000425707 ADGRB2O60241 1585 aa22.13■■□□□ 1.13
RARA-206ENST00000425707 NSD3Q9BZ95 1437 aa22.13■■□□□ 1.13
RARA-206ENST00000425707 PPLO60437 1756 aa22.13■■□□□ 1.13
RARA-206ENST00000425707 PPRC1Q5VV67 1664 aaKnown RBP22.13■■□□□ 1.13
RARA-206ENST00000425707 SEC24BO95487 1268 aa22.13■■□□□ 1.13
RARA-206ENST00000425707 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
RARA-206ENST00000425707 CT47B1P0C2W7 299 aaPredicted RBP22.12■■□□□ 1.13
RARA-206ENST00000425707 UGGT1Q9NYU2 1555 aa22.12■■□□□ 1.13
RARA-206ENST00000425707 L1TD1Q5T7N2 865 aaKnown RBP22.12■■□□□ 1.13
RARA-206ENST00000425707 NSD2O96028 1365 aa22.12■■□□□ 1.13
RARA-206ENST00000425707 PRKCSHP14314 528 aaPredicted RBP22.12■■□□□ 1.13
RARA-206ENST00000425707 RWDD1Q9H446 243 aaPredicted RBP22.12■■□□□ 1.13
RARA-206ENST00000425707 MORC1Q86VD1 984 aa22.1■■□□□ 1.13
RARA-206ENST00000425707 ADGRB1O14514 1584 aa22.1■■□□□ 1.13
RARA-206ENST00000425707 TCP11L2Q8N4U5 519 aa22.09■■□□□ 1.13
RARA-206ENST00000425707 MYH16Q9H6N6 1097 aa22.08■■□□□ 1.12
RARA-206ENST00000425707 PCDHB15Q9Y5E8 787 aa22.08■■□□□ 1.12
RARA-206ENST00000425707 KIF3BO15066 747 aa22.06■■□□□ 1.12
RARA-206ENST00000425707 CFAP53Q96M91 514 aa22.06■■□□□ 1.12
RARA-206ENST00000425707 PDZRN3Q9UPQ7 1066 aa22.06■■□□□ 1.12
RARA-206ENST00000425707 RSPH6AQ9H0K4 717 aa22.06■■□□□ 1.12
RARA-206ENST00000425707 NOS1P29475 1434 aa22.04■■□□□ 1.12
RARA-206ENST00000425707 KIDINS220Q9ULH0 1771 aa22.04■■□□□ 1.12
RARA-206ENST00000425707 C14orf93Q9H972 538 aaKnown RBP22.04■■□□□ 1.12
RARA-206ENST00000425707 RLBP1P12271 317 aa22.04■■□□□ 1.12
RARA-206ENST00000425707 MVPQ14764 893 aaKnown RBP22.04■■□□□ 1.12
RARA-206ENST00000425707 POGKQ9P215 609 aa22.03■■□□□ 1.12
RARA-206ENST00000425707 RPGRIP1LQ68CZ1 1315 aa22.03■■□□□ 1.12
RARA-206ENST00000425707 TBC1D2Q9BYX2 928 aa22.03■■□□□ 1.12
RARA-206ENST00000425707 HDAC1Q13547 482 aaPredicted RBP21.99■■□□□ 1.11
RARA-206ENST00000425707 ZKSCAN2Q63HK3 967 aa21.99■■□□□ 1.11
RARA-206ENST00000425707 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
RARA-206ENST00000425707 SLKQ9H2G2 1235 aaPredicted RBP21.98■■□□□ 1.11
RARA-206ENST00000425707 ARHGEF28Q8N1W1 1705 aaKnown RBP21.97■■□□□ 1.11
RARA-206ENST00000425707 MTHFSP49914 203 aa21.97■■□□□ 1.11
RARA-206ENST00000425707 DZIP1LQ8IYY4 767 aaKnown RBP21.96■■□□□ 1.11
RARA-206ENST00000425707 SLC12A5Q9H2X9 1139 aa21.96■■□□□ 1.11
RARA-206ENST00000425707 GLI2P10070 1586 aa21.96■■□□□ 1.11
RARA-206ENST00000425707 FSD2A1L4K1 749 aa21.96■■□□□ 1.11
RARA-206ENST00000425707 RRP7AQ9Y3A4 280 aaKnown RBP21.96■■□□□ 1.11
RARA-206ENST00000425707 IL16Q14005 1332 aa21.95■■□□□ 1.1
RARA-206ENST00000425707 ABCC11Q96J66 1382 aa21.95■■□□□ 1.1
RARA-206ENST00000425707 NEUROD2Q15784 382 aa21.94■■□□□ 1.1
RARA-206ENST00000425707 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
RARA-206ENST00000425707 CHMP5Q9NZZ3 219 aa21.94■■□□□ 1.1
RARA-206ENST00000425707 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.94■■□□□ 1.1
RARA-206ENST00000425707 TULP4Q9NRJ4 1543 aa21.93■■□□□ 1.1
RARA-206ENST00000425707 MCM4P33991 863 aa21.93■■□□□ 1.1
RARA-206ENST00000425707 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
RARA-206ENST00000425707 DDX19BQ9UMR2 479 aa21.93■■□□□ 1.1
RARA-206ENST00000425707 TNNQ9UQP3 1299 aa21.93■■□□□ 1.1
RARA-206ENST00000425707 PIK3C2BO00750 1634 aa21.92■■□□□ 1.1
RARA-206ENST00000425707 EVC2Q86UK5 1308 aa21.92■■□□□ 1.1
RARA-206ENST00000425707 C22orf23Q9BZE7 217 aa21.92■■□□□ 1.1
RARA-206ENST00000425707 MED14O60244 1454 aa21.91■■□□□ 1.1
RARA-206ENST00000425707 NPATQ14207 1427 aa21.91■■□□□ 1.1
RARA-206ENST00000425707 ISY1Q9ULR0 285 aaKnown RBP21.91■■□□□ 1.1
RARA-206ENST00000425707 NCOA3Q9Y6Q9 1424 aa21.91■■□□□ 1.1
RARA-206ENST00000425707 FTSJ3Q8IY81 847 aaKnown RBP21.91■■□□□ 1.1
RARA-206ENST00000425707 NPM1P06748 294 aaKnown RBP eCLIP21.9■■□□□ 1.1
RARA-206ENST00000425707 SMC5Q8IY18 1101 aa21.9■■□□□ 1.1
RARA-206ENST00000425707 TRAK1Q9UPV9 953 aa21.9■■□□□ 1.1
RARA-206ENST00000425707 CFAP74Q9C0B2 1584 aa21.9■■□□□ 1.1
RARA-206ENST00000425707 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
RARA-206ENST00000425707 GOLGA6L3A6NEY3 463 aa21.88■■□□□ 1.09
RARA-206ENST00000425707 CAMSAP1Q5T5Y3 1602 aa21.88■■□□□ 1.09
RARA-206ENST00000425707 BCL2L13Q9BXK5 485 aa21.88■■□□□ 1.09
RARA-206ENST00000425707 PLEKHF1Q96S99 279 aa21.87■■□□□ 1.09
RARA-206ENST00000425707 U2AF1L5P0DN76 240 aaPredicted RBP21.86■■□□□ 1.09
RARA-206ENST00000425707 TNNT2P45379 298 aaPredicted RBP21.86■■□□□ 1.09
RARA-206ENST00000425707 U2AF1Q01081 240 aaKnown RBP eCLIP21.86■■□□□ 1.09
RARA-206ENST00000425707 MLH3Q9UHC1 1453 aa21.86■■□□□ 1.09
RARA-206ENST00000425707 FRMPD1Q5SYB0 1578 aa21.85■■□□□ 1.09
RARA-206ENST00000425707 ATF7IPQ6VMQ6 1270 aa21.85■■□□□ 1.09
RARA-206ENST00000425707 CD109Q6YHK3 1445 aa21.85■■□□□ 1.09
RARA-206ENST00000425707 SNX21Q969T3 373 aa21.85■■□□□ 1.09
RARA-206ENST00000425707 DDX11L8A8MPP1 907 aa21.85■■□□□ 1.09
RARA-206ENST00000425707 TRIM27P14373 513 aa21.85■■□□□ 1.09
RARA-206ENST00000425707 RBM25P49756 843 aaKnown RBP21.85■■□□□ 1.09
RARA-206ENST00000425707 NEXMIFQ5QGS0 1516 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms