RNA–Protein interactions for RNA: ENST00000425322.1

AC006041.1-201, humanhuman

TSL 3 BASIC

Gene AC006041.1, Length 328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006041.1-201ENST00000425322 TTC24A2A3L6 582 aaPredicted RBP12.5□□□□□ -0.41
AC006041.1-201ENST00000425322 SMPD1P17405 629 aa12.5□□□□□ -0.41
AC006041.1-201ENST00000425322 LCE2CQ5TA81 110 aa12.5□□□□□ -0.41
AC006041.1-201ENST00000425322 SNIP1Q8TAD8 396 aaKnown RBP12.49□□□□□ -0.41
AC006041.1-201ENST00000425322 ATP13A2Q9NQ11 1180 aa12.49□□□□□ -0.41
AC006041.1-201ENST00000425322 DDX11L8A8MPP1 907 aa12.48□□□□□ -0.41
AC006041.1-201ENST00000425322 ZBTB24O43167 697 aaPredicted RBP12.48□□□□□ -0.41
AC006041.1-201ENST00000425322 FECHP22830 423 aa12.48□□□□□ -0.41
AC006041.1-201ENST00000425322 GPR37O15354 613 aa12.47□□□□□ -0.41
AC006041.1-201ENST00000425322 RNF19BQ6ZMZ0 732 aa12.46□□□□□ -0.41
AC006041.1-201ENST00000425322 SULF1Q8IWU6 871 aa12.46□□□□□ -0.41
AC006041.1-201ENST00000425322 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
AC006041.1-201ENST00000425322 SNRPBP14678 240 aaKnown RBP12.45□□□□□ -0.42
AC006041.1-201ENST00000425322 TRIM32Q13049 653 aa12.45□□□□□ -0.42
AC006041.1-201ENST00000425322 TERTO14746 1132 aaKnown RBP12.44□□□□□ -0.42
AC006041.1-201ENST00000425322 MMP16P51512 607 aa12.43□□□□□ -0.42
AC006041.1-201ENST00000425322 SENP2Q9HC62 589 aa12.43□□□□□ -0.42
AC006041.1-201ENST00000425322 NLRP7Q8WX94 980 aa12.42□□□□□ -0.42
AC006041.1-201ENST00000425322 MRGPRX2Q96LB1 330 aa12.42□□□□□ -0.42
AC006041.1-201ENST00000425322 J3QL48 77 aa12.4□□□□□ -0.42
AC006041.1-201ENST00000425322 PHOX2BQ99453 314 aa12.4□□□□□ -0.42
AC006041.1-201ENST00000425322 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
AC006041.1-201ENST00000425322 GRIPAP1Q4V328 841 aa12.38□□□□□ -0.43
AC006041.1-201ENST00000425322 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
AC006041.1-201ENST00000425322 Q3C1V9 767 aa12.37□□□□□ -0.43
AC006041.1-201ENST00000425322 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
AC006041.1-201ENST00000425322 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
AC006041.1-201ENST00000425322 HPS1Q92902 700 aa12.36□□□□□ -0.43
AC006041.1-201ENST00000425322 DXOO77932 396 aaKnown RBP12.35□□□□□ -0.43
AC006041.1-201ENST00000425322 USB1Q9BQ65 265 aaKnown RBP12.31□□□□□ -0.44
AC006041.1-201ENST00000425322 WNT7BP56706 349 aa12.3□□□□□ -0.44
AC006041.1-201ENST00000425322 SKOR1P84550 965 aa12.29□□□□□ -0.44
AC006041.1-201ENST00000425322 CD46P15529 392 aa12.28□□□□□ -0.44
AC006041.1-201ENST00000425322 RC3H1Q5TC82 1133 aaKnown RBP12.28□□□□□ -0.44
AC006041.1-201ENST00000425322 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
AC006041.1-201ENST00000425322 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
AC006041.1-201ENST00000425322 LORP23490 312 aaPredicted RBP12.24□□□□□ -0.45
AC006041.1-201ENST00000425322 KDM4AO75164 1064 aa12.23□□□□□ -0.45
AC006041.1-201ENST00000425322 MAP2K5Q13163 448 aa12.23□□□□□ -0.45
AC006041.1-201ENST00000425322 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
AC006041.1-201ENST00000425322 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
AC006041.1-201ENST00000425322 FAM181BA6NEQ2 426 aa12.22□□□□□ -0.45
AC006041.1-201ENST00000425322 NPAS3Q8IXF0 933 aa12.22□□□□□ -0.45
AC006041.1-201ENST00000425322 USP46P62068 366 aa12.2□□□□□ -0.46
AC006041.1-201ENST00000425322 CCDC24Q8N4L8 307 aa12.2□□□□□ -0.46
AC006041.1-201ENST00000425322 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
AC006041.1-201ENST00000425322 GMPRP36959 345 aa12.19□□□□□ -0.46
AC006041.1-201ENST00000425322 HLA-CQ95604 372 aa12.19□□□□□ -0.46
AC006041.1-201ENST00000425322 IRF6O14896 467 aa12.18□□□□□ -0.46
AC006041.1-201ENST00000425322 SIAH2O43255 324 aa12.18□□□□□ -0.46
AC006041.1-201ENST00000425322 TRIM46Q7Z4K8 759 aa12.18□□□□□ -0.46
AC006041.1-201ENST00000425322 ZSCAN1Q8NBB4 408 aa12.17□□□□□ -0.46
AC006041.1-201ENST00000425322 HOXA2O43364 376 aa12.16□□□□□ -0.46
AC006041.1-201ENST00000425322 JUNDP17535 347 aa12.16□□□□□ -0.46
AC006041.1-201ENST00000425322 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
AC006041.1-201ENST00000425322 IRF7Q92985 503 aa12.16□□□□□ -0.46
AC006041.1-201ENST00000425322 MINK1Q8N4C8 1332 aaPredicted RBP12.15□□□□□ -0.46
AC006041.1-201ENST00000425322 BMP1P13497 986 aa12.15□□□□□ -0.46
AC006041.1-201ENST00000425322 H3BM21 787 aa12.14□□□□□ -0.47
AC006041.1-201ENST00000425322 LOC100996750A0A140TA64 210 aa12.13□□□□□ -0.47
AC006041.1-201ENST00000425322 KRTAP4-6Q9BYQ5 205 aa12.13□□□□□ -0.47
AC006041.1-201ENST00000425322 CAPN5O15484 640 aaPredicted RBP12.12□□□□□ -0.47
AC006041.1-201ENST00000425322 EHBP1Q8NDI1 1231 aa12.11□□□□□ -0.47
AC006041.1-201ENST00000425322 PTCRAQ6ISU1 281 aaPredicted RBP12.1□□□□□ -0.47
AC006041.1-201ENST00000425322 GUCA2AQ02747 115 aa12.09□□□□□ -0.47
AC006041.1-201ENST00000425322 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
AC006041.1-201ENST00000425322 NUDT12Q9BQG2 462 aa12.09□□□□□ -0.47
AC006041.1-201ENST00000425322 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
AC006041.1-201ENST00000425322 WASF2Q9Y6W5 498 aa12.08□□□□□ -0.48
AC006041.1-201ENST00000425322 CLCN1P35523 988 aa12.07□□□□□ -0.48
AC006041.1-201ENST00000425322 VEGFBP49765 207 aa12.07□□□□□ -0.48
AC006041.1-201ENST00000425322 RETREG3Q86VR2 466 aa12.07□□□□□ -0.48
AC006041.1-201ENST00000425322 GPCPD1Q9NPB8 672 aa12.07□□□□□ -0.48
AC006041.1-201ENST00000425322 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
AC006041.1-201ENST00000425322 SYMPKQ92797 1274 aaKnown RBP12.06□□□□□ -0.48
AC006041.1-201ENST00000425322 SH3BP2P78314 561 aa12.05□□□□□ -0.48
AC006041.1-201ENST00000425322 NUTM1Q86Y26 1132 aa12.03□□□□□ -0.48
AC006041.1-201ENST00000425322 ZFP42Q96MM3 310 aa12.03□□□□□ -0.48
AC006041.1-201ENST00000425322 FAM217BQ9NTX9 383 aaPredicted RBP12.03□□□□□ -0.48
AC006041.1-201ENST00000425322 CCNYL3P0C7X3 344 aa12□□□□□ -0.49
AC006041.1-201ENST00000425322 MPNDQ8N594 471 aa12□□□□□ -0.49
AC006041.1-201ENST00000425322 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
AC006041.1-201ENST00000425322 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
AC006041.1-201ENST00000425322 MS4A1P11836 297 aa11.97□□□□□ -0.49
AC006041.1-201ENST00000425322 PTPRNQ16849 979 aa11.97□□□□□ -0.49
AC006041.1-201ENST00000425322 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
AC006041.1-201ENST00000425322 UNC93B1Q9H1C4 597 aa11.97□□□□□ -0.49
AC006041.1-201ENST00000425322 PCDHGC3Q9UN70 934 aa11.97□□□□□ -0.49
AC006041.1-201ENST00000425322 MRPL14Q6P1L8 145 aaKnown RBP11.96□□□□□ -0.49
AC006041.1-201ENST00000425322 EVA1BQ9NVM1 165 aa11.95□□□□□ -0.5
AC006041.1-201ENST00000425322 FDX1P10109 184 aa11.94□□□□□ -0.5
AC006041.1-201ENST00000425322 NNTQ13423 1086 aa11.94□□□□□ -0.5
AC006041.1-201ENST00000425322 PLEKHG3A1L390 1219 aa11.93□□□□□ -0.5
AC006041.1-201ENST00000425322 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
AC006041.1-201ENST00000425322 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
AC006041.1-201ENST00000425322 TIMP2P16035 220 aa11.92□□□□□ -0.5
AC006041.1-201ENST00000425322 SSTR3P32745 418 aaPredicted RBP11.92□□□□□ -0.5
AC006041.1-201ENST00000425322 ZNF511Q8NB15 262 aa11.92□□□□□ -0.5
AC006041.1-201ENST00000425322 BAP1Q92560 729 aa11.92□□□□□ -0.5
AC006041.1-201ENST00000425322 SCARF1Q14162 830 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms