RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ORAI2Q96SN7 254 aa22.37■■□□□ 1.17
USB1-202ENST00000423271 LAMC1P11047 1609 aa22.37■■□□□ 1.17
USB1-202ENST00000423271 HRCP23327 699 aa22.36■■□□□ 1.17
USB1-202ENST00000423271 CFAP70Q5T0N1 1121 aa22.35■■□□□ 1.17
USB1-202ENST00000423271 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
USB1-202ENST00000423271 MEX3CQ5U5Q3 659 aaKnown RBP22.34■■□□□ 1.17
USB1-202ENST00000423271 NUTM2BA6NNL0 878 aaPredicted RBP22.33■■□□□ 1.17
USB1-202ENST00000423271 NUTM2EB1AL46 878 aaPredicted RBP22.33■■□□□ 1.17
USB1-202ENST00000423271 NUTM2AQ8IVF1 878 aaPredicted RBP22.33■■□□□ 1.17
USB1-202ENST00000423271 PNPLA6Q8IY17 1366 aa22.33■■□□□ 1.17
USB1-202ENST00000423271 LRRC59Q96AG4 307 aaKnown RBP22.32■■□□□ 1.16
USB1-202ENST00000423271 SOS2Q07890 1332 aaPredicted RBP22.29■■□□□ 1.16
USB1-202ENST00000423271 FMN2Q9NZ56 1722 aa22.28■■□□□ 1.16
USB1-202ENST00000423271 DHX57Q6P158 1386 aaKnown RBP22.28■■□□□ 1.16
USB1-202ENST00000423271 NUTM2FA1L443 756 aa22.28■■□□□ 1.16
USB1-202ENST00000423271 ADGRB1O14514 1584 aa22.27■■□□□ 1.16
USB1-202ENST00000423271 ESCO1Q5FWF5 840 aa22.27■■□□□ 1.16
USB1-202ENST00000423271 KDM2AQ9Y2K7 1162 aa22.26■■□□□ 1.15
USB1-202ENST00000423271 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
USB1-202ENST00000423271 SIRT1Q96EB6 747 aa22.25■■□□□ 1.15
USB1-202ENST00000423271 PXDNQ92626 1479 aa22.24■■□□□ 1.15
USB1-202ENST00000423271 DLC1Q96QB1 1528 aa22.24■■□□□ 1.15
USB1-202ENST00000423271 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
USB1-202ENST00000423271 ZNF772Q68DY9 489 aaPredicted RBP22.23■■□□□ 1.15
USB1-202ENST00000423271 PRAM1Q96QH2 718 aa22.23■■□□□ 1.15
USB1-202ENST00000423271 NPHP3Q7Z494 1330 aa22.22■■□□□ 1.15
USB1-202ENST00000423271 XPCQ01831 940 aaPredicted RBP22.21■■□□□ 1.15
USB1-202ENST00000423271 AFF2P51816 1311 aa22.21■■□□□ 1.15
USB1-202ENST00000423271 FOXO3O43524 673 aa22.2■■□□□ 1.14
USB1-202ENST00000423271 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
USB1-202ENST00000423271 RGPD8O14715 1765 aaPredicted RBP22.2■■□□□ 1.14
USB1-202ENST00000423271 C8orf37Q96NL8 207 aa22.19■■□□□ 1.14
USB1-202ENST00000423271 KIF1AQ12756 1690 aa22.19■■□□□ 1.14
USB1-202ENST00000423271 ADAMTS2O95450 1211 aa22.18■■□□□ 1.14
USB1-202ENST00000423271 TRAK1Q9UPV9 953 aa22.17■■□□□ 1.14
USB1-202ENST00000423271 ADGRB2O60241 1585 aa22.16■■□□□ 1.14
USB1-202ENST00000423271 POGKQ9P215 609 aa22.16■■□□□ 1.14
USB1-202ENST00000423271 STAC3Q96MF2 364 aa22.15■■□□□ 1.14
USB1-202ENST00000423271 USP32Q8NFA0 1604 aa22.14■■□□□ 1.14
USB1-202ENST00000423271 ARHGEF28Q8N1W1 1705 aaKnown RBP22.11■■□□□ 1.13
USB1-202ENST00000423271 RXRBP28702 533 aa22.11■■□□□ 1.13
USB1-202ENST00000423271 HIRIP3Q9BW71 556 aaPredicted RBP22.11■■□□□ 1.13
USB1-202ENST00000423271 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
USB1-202ENST00000423271 MINK1Q8N4C8 1332 aaPredicted RBP22.1■■□□□ 1.13
USB1-202ENST00000423271 NGLY1Q96IV0 654 aa22.1■■□□□ 1.13
USB1-202ENST00000423271 ANKARQ7Z5J8 1434 aa22.09■■□□□ 1.13
USB1-202ENST00000423271 KRT28Q7Z3Y7 464 aa22.09■■□□□ 1.13
USB1-202ENST00000423271 SPATA31A3Q5VYP0 1347 aa22.08■■□□□ 1.13
USB1-202ENST00000423271 KIAA1210Q9ULL0 1709 aa22.07■■□□□ 1.12
USB1-202ENST00000423271 MARF1Q9Y4F3 1742 aaKnown RBP22.07■■□□□ 1.12
USB1-202ENST00000423271 QTRT2Q9H974 415 aaKnown RBP22.07■■□□□ 1.12
USB1-202ENST00000423271 CDK12Q9NYV4 1490 aaPredicted RBP22.07■■□□□ 1.12
USB1-202ENST00000423271 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
USB1-202ENST00000423271 PRR36Q9H6K5 1346 aa22.06■■□□□ 1.12
USB1-202ENST00000423271 PMFBP1Q8TBY8 1022 aa22.05■■□□□ 1.12
USB1-202ENST00000423271 RGS12O14924 1447 aa22.05■■□□□ 1.12
USB1-202ENST00000423271 TNS3Q68CZ2 1445 aa22.05■■□□□ 1.12
USB1-202ENST00000423271 USP21Q9UK80 565 aa22.04■■□□□ 1.12
USB1-202ENST00000423271 WASLO00401 505 aaPredicted RBP22.03■■□□□ 1.12
USB1-202ENST00000423271 FNBP4Q8N3X1 1017 aaPredicted RBP22.03■■□□□ 1.12
USB1-202ENST00000423271 RBM6P78332 1123 aaKnown RBP22.02■■□□□ 1.12
USB1-202ENST00000423271 EIF3AQ14152 1382 aaKnown RBP22.01■■□□□ 1.11
USB1-202ENST00000423271 PSME1Q06323 249 aa22.01■■□□□ 1.11
USB1-202ENST00000423271 NBPF1Q3BBV0 1214 aa22.01■■□□□ 1.11
USB1-202ENST00000423271 SBNO1A3KN83 1393 aa22■■□□□ 1.11
USB1-202ENST00000423271 ABCA3Q99758 1704 aa22■■□□□ 1.11
USB1-202ENST00000423271 TRPM3Q9HCF6 1732 aaPredicted RBP22■■□□□ 1.11
USB1-202ENST00000423271 ATRNO75882 1429 aa21.99■■□□□ 1.11
USB1-202ENST00000423271 BCL9LQ86UU0 1499 aa21.99■■□□□ 1.11
USB1-202ENST00000423271 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
USB1-202ENST00000423271 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
USB1-202ENST00000423271 ATP7BP35670 1465 aa21.98■■□□□ 1.11
USB1-202ENST00000423271 PLEKHG5O94827 1062 aa21.98■■□□□ 1.11
USB1-202ENST00000423271 TRPC5Q9UL62 973 aaPredicted RBP21.98■■□□□ 1.11
USB1-202ENST00000423271 LMOD2Q6P5Q4 547 aa21.97■■□□□ 1.11
USB1-202ENST00000423271 CABLES1Q8TDN4 633 aa21.97■■□□□ 1.11
USB1-202ENST00000423271 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
USB1-202ENST00000423271 UPF1Q92900 1129 aaKnown RBP eCLIP21.96■■□□□ 1.11
USB1-202ENST00000423271 ARHGEF10O15013 1369 aa21.96■■□□□ 1.11
USB1-202ENST00000423271 ITSN1Q15811 1721 aa21.95■■□□□ 1.1
USB1-202ENST00000423271 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
USB1-202ENST00000423271 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.94■■□□□ 1.1
USB1-202ENST00000423271 SLIT2O94813 1529 aa21.94■■□□□ 1.1
USB1-202ENST00000423271 GPRASP1Q5JY77 1395 aa21.93■■□□□ 1.1
USB1-202ENST00000423271 NUDT16Q96DE0 195 aaKnown RBP21.93■■□□□ 1.1
USB1-202ENST00000423271 TOPAZ1Q8N9V7 1692 aa21.92■■□□□ 1.1
USB1-202ENST00000423271 HAP1P54257 671 aaPredicted RBP21.92■■□□□ 1.1
USB1-202ENST00000423271 NEUROD1Q13562 356 aa21.92■■□□□ 1.1
USB1-202ENST00000423271 CDK19Q9BWU1 502 aa21.92■■□□□ 1.1
USB1-202ENST00000423271 NGDNQ8NEJ9 315 aaKnown RBP21.91■■□□□ 1.1
USB1-202ENST00000423271 PLCH1Q4KWH8 1693 aa21.91■■□□□ 1.1
USB1-202ENST00000423271 TRPM1Q7Z4N2 1603 aa21.9■■□□□ 1.1
USB1-202ENST00000423271 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
USB1-202ENST00000423271 UNC5CLQ8IV45 518 aa21.88■■□□□ 1.09
USB1-202ENST00000423271 GLI3P10071 1580 aa21.87■■□□□ 1.09
USB1-202ENST00000423271 CENPJQ9HC77 1338 aaPredicted RBP21.87■■□□□ 1.09
USB1-202ENST00000423271 CRYBG1Q9Y4K1 1723 aa21.87■■□□□ 1.09
USB1-202ENST00000423271 GJD4Q96KN9 370 aaPredicted RBP21.87■■□□□ 1.09
USB1-202ENST00000423271 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
USB1-202ENST00000423271 NWD2Q9ULI1 1742 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms