RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 CLCN1P35523 988 aa16.15■□□□□ 0.18
CTCFL-204ENST00000422869 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
CTCFL-204ENST00000422869 BCL2L13Q9BXK5 485 aa16.15■□□□□ 0.18
CTCFL-204ENST00000422869 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
CTCFL-204ENST00000422869 RWDD1Q9H446 243 aaPredicted RBP16.14■□□□□ 0.17
CTCFL-204ENST00000422869 MAP3K4Q9Y6R4 1608 aa16.13■□□□□ 0.17
CTCFL-204ENST00000422869 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
CTCFL-204ENST00000422869 ABCC1P33527 1531 aa16.13■□□□□ 0.17
CTCFL-204ENST00000422869 TCP11L2Q8N4U5 519 aa16.13■□□□□ 0.17
CTCFL-204ENST00000422869 RUNDC1Q96C34 613 aa16.13■□□□□ 0.17
CTCFL-204ENST00000422869 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
CTCFL-204ENST00000422869 TRAK2O60296 914 aa16.12■□□□□ 0.17
CTCFL-204ENST00000422869 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
CTCFL-204ENST00000422869 TET3O43151 1660 aa16.12■□□□□ 0.17
CTCFL-204ENST00000422869 TRAPPC8Q9Y2L5 1435 aa16.12■□□□□ 0.17
CTCFL-204ENST00000422869 WDR63Q8IWG1 891 aa16.11■□□□□ 0.17
CTCFL-204ENST00000422869 C22orf23Q9BZE7 217 aa16.11■□□□□ 0.17
CTCFL-204ENST00000422869 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
CTCFL-204ENST00000422869 CFAP70Q5T0N1 1121 aa16.11■□□□□ 0.17
CTCFL-204ENST00000422869 NEURL4Q96JN8 1562 aa16.11■□□□□ 0.17
CTCFL-204ENST00000422869 KANK1Q14678 1352 aa16.1■□□□□ 0.17
CTCFL-204ENST00000422869 MVPQ14764 893 aaKnown RBP16.1■□□□□ 0.17
CTCFL-204ENST00000422869 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
CTCFL-204ENST00000422869 PLCH2O75038 1416 aa16.09■□□□□ 0.17
CTCFL-204ENST00000422869 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-204ENST00000422869 MYOM2P54296 1465 aa16.09■□□□□ 0.17
CTCFL-204ENST00000422869 IFT172Q9UG01 1749 aa16.09■□□□□ 0.17
CTCFL-204ENST00000422869 MRE11P49959 708 aa16.09■□□□□ 0.17
CTCFL-204ENST00000422869 MFAP1P55081 439 aaKnown RBP16.08■□□□□ 0.17
CTCFL-204ENST00000422869 NSD3Q9BZ95 1437 aa16.08■□□□□ 0.17
CTCFL-204ENST00000422869 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
CTCFL-204ENST00000422869 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
CTCFL-204ENST00000422869 ZFYVE16Q7Z3T8 1539 aa16.07■□□□□ 0.16
CTCFL-204ENST00000422869 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-204ENST00000422869 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-204ENST00000422869 ADGRF5Q8IZF2 1346 aa16.07■□□□□ 0.16
CTCFL-204ENST00000422869 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
CTCFL-204ENST00000422869 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
CTCFL-204ENST00000422869 ZNF518AQ6AHZ1 1483 aa16.06■□□□□ 0.16
CTCFL-204ENST00000422869 DDIT3P35638 169 aa16.06■□□□□ 0.16
CTCFL-204ENST00000422869 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
CTCFL-204ENST00000422869 GRPEL1Q9HAV7 217 aa16.06■□□□□ 0.16
CTCFL-204ENST00000422869 VWDEQ8N2E2 1590 aa16.06■□□□□ 0.16
CTCFL-204ENST00000422869 ZC3H13Q5T200 1668 aaKnown RBP16.05■□□□□ 0.16
CTCFL-204ENST00000422869 USP32Q8NFA0 1604 aa16.04■□□□□ 0.16
CTCFL-204ENST00000422869 ERBB4Q15303 1308 aa16.04■□□□□ 0.16
CTCFL-204ENST00000422869 DDX11L8A8MPP1 907 aa16.04■□□□□ 0.16
CTCFL-204ENST00000422869 KIF1BO60333 1816 aa16.04■□□□□ 0.16
CTCFL-204ENST00000422869 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
CTCFL-204ENST00000422869 EFCAB2Q5VUJ9 269 aa16.04■□□□□ 0.16
CTCFL-204ENST00000422869 ZKSCAN2Q63HK3 967 aa16.04■□□□□ 0.16
CTCFL-204ENST00000422869 DZIP1LQ8IYY4 767 aaKnown RBP16.04■□□□□ 0.16
CTCFL-204ENST00000422869 MROH2AA6NES4 1674 aa16.03■□□□□ 0.16
CTCFL-204ENST00000422869 HDAC1Q13547 482 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-204ENST00000422869 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
CTCFL-204ENST00000422869 HSCBQ8IWL3 235 aa16.02■□□□□ 0.16
CTCFL-204ENST00000422869 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
CTCFL-204ENST00000422869 NRXN1Q9ULB1 1477 aa16.02■□□□□ 0.16
CTCFL-204ENST00000422869 SPAG9O60271 1321 aaKnown RBP16.02■□□□□ 0.16
CTCFL-204ENST00000422869 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
CTCFL-204ENST00000422869 MTHFSP49914 203 aa16.02■□□□□ 0.15
CTCFL-204ENST00000422869 ISY1Q9ULR0 285 aaKnown RBP16.02■□□□□ 0.15
CTCFL-204ENST00000422869 QRICH2Q9H0J4 1663 aa16.01■□□□□ 0.15
CTCFL-204ENST00000422869 ESPNB1AK53 854 aa16.01■□□□□ 0.15
CTCFL-204ENST00000422869 SLC12A5Q9H2X9 1139 aa16.01■□□□□ 0.15
CTCFL-204ENST00000422869 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
CTCFL-204ENST00000422869 INO80Q9ULG1 1556 aaPredicted RBP16■□□□□ 0.15
CTCFL-204ENST00000422869 TRIM27P14373 513 aa16■□□□□ 0.15
CTCFL-204ENST00000422869 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
CTCFL-204ENST00000422869 AFAP1Q8N556 730 aa16■□□□□ 0.15
CTCFL-204ENST00000422869 RRP9O43818 475 aaKnown RBP15.99■□□□□ 0.15
CTCFL-204ENST00000422869 RBM25P49756 843 aaKnown RBP15.99■□□□□ 0.15
CTCFL-204ENST00000422869 GLIPR1L2Q4G1C9 344 aa15.99■□□□□ 0.15
CTCFL-204ENST00000422869 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
CTCFL-204ENST00000422869 ADGRL1O94910 1474 aa15.99■□□□□ 0.15
CTCFL-204ENST00000422869 ERCC6L2Q5T890 1561 aa15.99■□□□□ 0.15
CTCFL-204ENST00000422869 SETBP1Q9Y6X0 1596 aa15.99■□□□□ 0.15
CTCFL-204ENST00000422869 HSP90AA2PQ14568 343 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-204ENST00000422869 ZCCHC11Q5TAX3 1644 aaKnown RBP15.99■□□□□ 0.15
CTCFL-204ENST00000422869 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
CTCFL-204ENST00000422869 TNPO1Q92973 898 aaKnown RBP15.99■□□□□ 0.15
CTCFL-204ENST00000422869 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
CTCFL-204ENST00000422869 MROH1Q8NDA8 1641 aa15.98■□□□□ 0.15
CTCFL-204ENST00000422869 SNX21Q969T3 373 aa15.98■□□□□ 0.15
CTCFL-204ENST00000422869 CHD1O14646 1710 aa15.97■□□□□ 0.15
CTCFL-204ENST00000422869 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
CTCFL-204ENST00000422869 SMC4Q9NTJ3 1288 aa15.97■□□□□ 0.15
CTCFL-204ENST00000422869 DDX19BQ9UMR2 479 aa15.97■□□□□ 0.15
CTCFL-204ENST00000422869 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
CTCFL-204ENST00000422869 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
CTCFL-204ENST00000422869 SSH1Q8WYL5 1049 aa15.96■□□□□ 0.14
CTCFL-204ENST00000422869 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
CTCFL-204ENST00000422869 ATF7IPQ6VMQ6 1270 aa15.95■□□□□ 0.14
CTCFL-204ENST00000422869 CD109Q6YHK3 1445 aa15.95■□□□□ 0.14
CTCFL-204ENST00000422869 RAB3GAP1Q15042 981 aa15.95■□□□□ 0.14
CTCFL-204ENST00000422869 ATP7AQ04656 1500 aa15.95■□□□□ 0.14
CTCFL-204ENST00000422869 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
CTCFL-204ENST00000422869 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
CTCFL-204ENST00000422869 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
CTCFL-204ENST00000422869 ZBTB40Q9NUA8 1239 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms