RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 RXRBP28702 533 aa27.95■■■□□ 2.06
AC004540.1-203ENST00000421862 ADGRF5Q8IZF2 1346 aa27.94■■■□□ 2.06
AC004540.1-203ENST00000421862 ORAI2Q96SN7 254 aa27.94■■■□□ 2.06
AC004540.1-203ENST00000421862 PXDNQ92626 1479 aa27.94■■■□□ 2.06
AC004540.1-203ENST00000421862 RGS12O14924 1447 aa27.93■■■□□ 2.06
AC004540.1-203ENST00000421862 LRPPRCP42704 1394 aaKnown RBP27.92■■■□□ 2.06
AC004540.1-203ENST00000421862 KIF1AQ12756 1690 aa27.91■■■□□ 2.06
AC004540.1-203ENST00000421862 MYOM2P54296 1465 aa27.91■■■□□ 2.06
AC004540.1-203ENST00000421862 UPF1Q92900 1129 aaKnown RBP eCLIP27.91■■■□□ 2.06
AC004540.1-203ENST00000421862 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.06
AC004540.1-203ENST00000421862 C8orf37Q96NL8 207 aa27.89■■■□□ 2.06
AC004540.1-203ENST00000421862 MPHOSPH9Q99550 1183 aa27.89■■■□□ 2.06
AC004540.1-203ENST00000421862 ABCC11Q96J66 1382 aa27.87■■■□□ 2.05
AC004540.1-203ENST00000421862 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.85■■■□□ 2.05
AC004540.1-203ENST00000421862 RGPD8O14715 1765 aaPredicted RBP27.84■■■□□ 2.05
AC004540.1-203ENST00000421862 NPHP3Q7Z494 1330 aa27.84■■■□□ 2.05
AC004540.1-203ENST00000421862 YTHDC2Q9H6S0 1430 aaKnown RBP27.84■■■□□ 2.05
AC004540.1-203ENST00000421862 RBM6P78332 1123 aaKnown RBP27.83■■■□□ 2.05
AC004540.1-203ENST00000421862 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
AC004540.1-203ENST00000421862 PLEKHH1Q9ULM0 1364 aa27.82■■■□□ 2.04
AC004540.1-203ENST00000421862 RGL3Q3MIN7 710 aa27.81■■■□□ 2.04
AC004540.1-203ENST00000421862 ADAMTS2O95450 1211 aa27.8■■■□□ 2.04
AC004540.1-203ENST00000421862 QTRT2Q9H974 415 aaKnown RBP27.8■■■□□ 2.04
AC004540.1-203ENST00000421862 ATRNO75882 1429 aa27.79■■■□□ 2.04
AC004540.1-203ENST00000421862 ESCO1Q5FWF5 840 aa27.77■■■□□ 2.04
AC004540.1-203ENST00000421862 WAPLQ7Z5K2 1190 aa27.77■■■□□ 2.04
AC004540.1-203ENST00000421862 NGLY1Q96IV0 654 aa27.77■■■□□ 2.04
AC004540.1-203ENST00000421862 ABCA3Q99758 1704 aa27.77■■■□□ 2.04
AC004540.1-203ENST00000421862 FNBP4Q8N3X1 1017 aaPredicted RBP27.76■■■□□ 2.03
AC004540.1-203ENST00000421862 ADGRB2O60241 1585 aa27.76■■■□□ 2.03
AC004540.1-203ENST00000421862 STK26Q9P289 416 aa27.75■■■□□ 2.03
AC004540.1-203ENST00000421862 DLC1Q96QB1 1528 aa27.75■■■□□ 2.03
AC004540.1-203ENST00000421862 USP32Q8NFA0 1604 aa27.74■■■□□ 2.03
AC004540.1-203ENST00000421862 TMEM132EQ6IEE7 984 aa27.74■■■□□ 2.03
AC004540.1-203ENST00000421862 BCL9LQ86UU0 1499 aa27.72■■■□□ 2.03
AC004540.1-203ENST00000421862 SIRT1Q96EB6 747 aa27.72■■■□□ 2.03
AC004540.1-203ENST00000421862 USP21Q9UK80 565 aa27.72■■■□□ 2.03
AC004540.1-203ENST00000421862 ADGRB1O14514 1584 aa27.72■■■□□ 2.03
AC004540.1-203ENST00000421862 FOXO3O43524 673 aa27.71■■■□□ 2.03
AC004540.1-203ENST00000421862 C14orf93Q9H972 538 aaKnown RBP27.71■■■□□ 2.03
AC004540.1-203ENST00000421862 TRPC5Q9UL62 973 aaPredicted RBP27.7■■■□□ 2.02
AC004540.1-203ENST00000421862 RAB3GAP2Q9H2M9 1393 aa27.69■■■□□ 2.02
AC004540.1-203ENST00000421862 EP400Q96L91 3159 aa27.68■■■□□ 2.02
AC004540.1-203ENST00000421862 XPCQ01831 940 aaPredicted RBP27.67■■■□□ 2.02
AC004540.1-203ENST00000421862 PLCH1Q4KWH8 1693 aa27.67■■■□□ 2.02
AC004540.1-203ENST00000421862 ATAD2Q6PL18 1390 aa27.66■■■□□ 2.02
AC004540.1-203ENST00000421862 NWD2Q9ULI1 1742 aa27.66■■■□□ 2.02
AC004540.1-203ENST00000421862 SLIT2O94813 1529 aa27.66■■■□□ 2.02
AC004540.1-203ENST00000421862 DHX57Q6P158 1386 aaKnown RBP27.65■■■□□ 2.02
AC004540.1-203ENST00000421862 NUTM2FA1L443 756 aa27.65■■■□□ 2.02
AC004540.1-203ENST00000421862 SPATA31A3Q5VYP0 1347 aa27.65■■■□□ 2.02
AC004540.1-203ENST00000421862 GLI3P10071 1580 aa27.65■■■□□ 2.02
AC004540.1-203ENST00000421862 TNS3Q68CZ2 1445 aa27.64■■■□□ 2.02
AC004540.1-203ENST00000421862 TRPM3Q9HCF6 1732 aaPredicted RBP27.64■■■□□ 2.01
AC004540.1-203ENST00000421862 CFAP70Q5T0N1 1121 aa27.62■■■□□ 2.01
AC004540.1-203ENST00000421862 ANKARQ7Z5J8 1434 aa27.61■■■□□ 2.01
AC004540.1-203ENST00000421862 BRWD3Q6RI45 1802 aa27.6■■■□□ 2.01
AC004540.1-203ENST00000421862 ALS2Q96Q42 1657 aa27.59■■■□□ 2.01
AC004540.1-203ENST00000421862 ARHGEF28Q8N1W1 1705 aaKnown RBP27.58■■■□□ 2.01
AC004540.1-203ENST00000421862 CRYBG1Q9Y4K1 1723 aa27.57■■■□□ 2
AC004540.1-203ENST00000421862 SBNO1A3KN83 1393 aa27.57■■■□□ 2
AC004540.1-203ENST00000421862 RALGAPBQ86X10 1494 aa27.56■■■□□ 2
AC004540.1-203ENST00000421862 NRAPQ86VF7 1730 aa27.55■■■□□ 2
AC004540.1-203ENST00000421862 PRAM1Q96QH2 718 aa27.55■■■□□ 2
AC004540.1-203ENST00000421862 PHF8Q9UPP1 1060 aa27.55■■■□□ 2
AC004540.1-203ENST00000421862 KRT28Q7Z3Y7 464 aa27.54■■■□□ 2
AC004540.1-203ENST00000421862 TULP4Q9NRJ4 1543 aa27.54■■■□□ 2
AC004540.1-203ENST00000421862 ITSN1Q15811 1721 aa27.53■■■□□ 2
AC004540.1-203ENST00000421862 GJD4Q96KN9 370 aaPredicted RBP27.52■■■□□ 2
AC004540.1-203ENST00000421862 ARHGEF10O15013 1369 aa27.5■■□□□ 1.99
AC004540.1-203ENST00000421862 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
AC004540.1-203ENST00000421862 PSME1Q06323 249 aa27.47■■□□□ 1.99
AC004540.1-203ENST00000421862 SAFB2Q14151 953 aaKnown RBP eCLIP27.47■■□□□ 1.99
AC004540.1-203ENST00000421862 KIAA1210Q9ULL0 1709 aa27.47■■□□□ 1.99
AC004540.1-203ENST00000421862 EIF3AQ14152 1382 aaKnown RBP27.47■■□□□ 1.99
AC004540.1-203ENST00000421862 COL14A1Q05707 1796 aaKnown RBP27.45■■□□□ 1.99
AC004540.1-203ENST00000421862 TOPAZ1Q8N9V7 1692 aa27.45■■□□□ 1.98
AC004540.1-203ENST00000421862 POGKQ9P215 609 aa27.44■■□□□ 1.98
AC004540.1-203ENST00000421862 HRCP23327 699 aa27.42■■□□□ 1.98
AC004540.1-203ENST00000421862 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
AC004540.1-203ENST00000421862 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
AC004540.1-203ENST00000421862 ATP7BP35670 1465 aa27.41■■□□□ 1.98
AC004540.1-203ENST00000421862 CCDC125Q86Z20 511 aa27.4■■□□□ 1.98
AC004540.1-203ENST00000421862 CABLES1Q8TDN4 633 aa27.4■■□□□ 1.98
AC004540.1-203ENST00000421862 TRAK1Q9UPV9 953 aa27.4■■□□□ 1.98
AC004540.1-203ENST00000421862 PHRF1Q9P1Y6 1649 aaKnown RBP27.39■■□□□ 1.98
AC004540.1-203ENST00000421862 VPS72Q15906 364 aa27.39■■□□□ 1.98
AC004540.1-203ENST00000421862 PMFBP1Q8TBY8 1022 aa27.38■■□□□ 1.97
AC004540.1-203ENST00000421862 DCAF11Q8TEB1 546 aa27.38■■□□□ 1.97
AC004540.1-203ENST00000421862 BLMP54132 1417 aaPredicted RBP27.38■■□□□ 1.97
AC004540.1-203ENST00000421862 SRCAPQ6ZRS2 3230 aa27.37■■□□□ 1.97
AC004540.1-203ENST00000421862 HAP1P54257 671 aaPredicted RBP27.36■■□□□ 1.97
AC004540.1-203ENST00000421862 HIRIP3Q9BW71 556 aaPredicted RBP27.36■■□□□ 1.97
AC004540.1-203ENST00000421862 MINK1Q8N4C8 1332 aaPredicted RBP27.36■■□□□ 1.97
AC004540.1-203ENST00000421862 WASLO00401 505 aaPredicted RBP27.34■■□□□ 1.97
AC004540.1-203ENST00000421862 GPRASP1Q5JY77 1395 aa27.34■■□□□ 1.97
AC004540.1-203ENST00000421862 KDM2AQ9Y2K7 1162 aa27.33■■□□□ 1.97
AC004540.1-203ENST00000421862 ONECUT3O60422 494 aaPredicted RBP27.32■■□□□ 1.96
AC004540.1-203ENST00000421862 THSD7AQ9UPZ6 1657 aa27.32■■□□□ 1.96
AC004540.1-203ENST00000421862 LMOD2Q6P5Q4 547 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms