RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 CADPS2Q86UW7 1296 aa28.86■■■□□ 2.21
EGFR-204ENST00000420316 NALCNQ8IZF0 1738 aa28.86■■■□□ 2.21
EGFR-204ENST00000420316 ATF3P18847 181 aa28.85■■■□□ 2.21
EGFR-204ENST00000420316 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.85■■■□□ 2.21
EGFR-204ENST00000420316 POGKQ9P215 609 aa28.84■■■□□ 2.21
EGFR-204ENST00000420316 DCCP43146 1447 aa28.84■■■□□ 2.21
EGFR-204ENST00000420316 GPRASP1Q5JY77 1395 aa28.82■■■□□ 2.2
EGFR-204ENST00000420316 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
EGFR-204ENST00000420316 MINK1Q8N4C8 1332 aaPredicted RBP28.78■■■□□ 2.2
EGFR-204ENST00000420316 PIP4K2BP78356 416 aa28.78■■■□□ 2.2
EGFR-204ENST00000420316 HIRIP3Q9BW71 556 aaPredicted RBP28.78■■■□□ 2.2
EGFR-204ENST00000420316 ILDR1Q86SU0 546 aaPredicted RBP28.76■■■□□ 2.19
EGFR-204ENST00000420316 SCAF1Q9H7N4 1312 aaKnown RBP28.74■■■□□ 2.19
EGFR-204ENST00000420316 QRICH2Q9H0J4 1663 aa28.73■■■□□ 2.19
EGFR-204ENST00000420316 CENPJQ9HC77 1338 aaPredicted RBP28.72■■■□□ 2.19
EGFR-204ENST00000420316 NUTM2FA1L443 756 aa28.71■■■□□ 2.19
EGFR-204ENST00000420316 MST1RQ04912 1400 aa28.7■■■□□ 2.18
EGFR-204ENST00000420316 CDC42BPGQ6DT37 1551 aa28.7■■■□□ 2.18
EGFR-204ENST00000420316 EIF3AQ14152 1382 aaKnown RBP28.67■■■□□ 2.18
EGFR-204ENST00000420316 USP47Q96K76 1375 aa28.67■■■□□ 2.18
EGFR-204ENST00000420316 ST20-MTHFSA0A0A6YYL1 179 aa28.65■■■□□ 2.18
EGFR-204ENST00000420316 C1orf167Q5SNV9 1468 aa28.64■■■□□ 2.18
EGFR-204ENST00000420316 ADGRB2O60241 1585 aa28.62■■■□□ 2.17
EGFR-204ENST00000420316 FMN2Q9NZ56 1722 aa28.62■■■□□ 2.17
EGFR-204ENST00000420316 WASLO00401 505 aaPredicted RBP28.62■■■□□ 2.17
EGFR-204ENST00000420316 BRINP3Q76B58 766 aa28.62■■■□□ 2.17
EGFR-204ENST00000420316 RGPD8O14715 1765 aaPredicted RBP28.6■■■□□ 2.17
EGFR-204ENST00000420316 ROBO1Q9Y6N7 1651 aa28.59■■■□□ 2.17
EGFR-204ENST00000420316 CDK19Q9BWU1 502 aa28.58■■■□□ 2.17
EGFR-204ENST00000420316 TULP4Q9NRJ4 1543 aa28.58■■■□□ 2.16
EGFR-204ENST00000420316 HSPA5P11021 654 aaKnown RBP28.57■■■□□ 2.16
EGFR-204ENST00000420316 HSPA1LP34931 641 aa28.57■■■□□ 2.16
EGFR-204ENST00000420316 ORAI2Q96SN7 254 aa28.57■■■□□ 2.16
EGFR-204ENST00000420316 CABP2Q9NPB3 220 aa28.55■■■□□ 2.16
EGFR-204ENST00000420316 USP32Q8NFA0 1604 aa28.55■■■□□ 2.16
EGFR-204ENST00000420316 ESCO1Q5FWF5 840 aa28.54■■■□□ 2.16
EGFR-204ENST00000420316 PRR36Q9H6K5 1346 aa28.54■■■□□ 2.16
EGFR-204ENST00000420316 ANKARQ7Z5J8 1434 aa28.54■■■□□ 2.16
EGFR-204ENST00000420316 TESK2Q96S53 571 aa28.54■■■□□ 2.16
EGFR-204ENST00000420316 SBNO2Q9Y2G9 1366 aa28.53■■■□□ 2.16
EGFR-204ENST00000420316 EIF4G2P78344 907 aaKnown RBP eCLIP28.53■■■□□ 2.16
EGFR-204ENST00000420316 SRPK2P78362 688 aaKnown RBP28.52■■■□□ 2.16
EGFR-204ENST00000420316 DDX17Q92841 729 aaKnown RBP28.5■■■□□ 2.15
EGFR-204ENST00000420316 EVC2Q86UK5 1308 aa28.49■■■□□ 2.15
EGFR-204ENST00000420316 ZEB1P37275 1124 aaPredicted RBP28.49■■■□□ 2.15
EGFR-204ENST00000420316 SLC24A1O60721 1099 aa28.48■■■□□ 2.15
EGFR-204ENST00000420316 NUDT16Q96DE0 195 aaKnown RBP28.48■■■□□ 2.15
EGFR-204ENST00000420316 PHF8Q9UPP1 1060 aa28.46■■■□□ 2.15
EGFR-204ENST00000420316 AHDC1Q5TGY3 1603 aaPredicted RBP28.46■■■□□ 2.15
EGFR-204ENST00000420316 ATP7BP35670 1465 aa28.46■■■□□ 2.15
EGFR-204ENST00000420316 DISP3Q9P2K9 1392 aa28.46■■■□□ 2.15
EGFR-204ENST00000420316 PMFBP1Q8TBY8 1022 aa28.45■■■□□ 2.15
EGFR-204ENST00000420316 CCDC61Q9Y6R9 512 aa28.44■■■□□ 2.14
EGFR-204ENST00000420316 NPHP3Q7Z494 1330 aa28.43■■■□□ 2.14
EGFR-204ENST00000420316 FOXO3O43524 673 aa28.43■■■□□ 2.14
EGFR-204ENST00000420316 SOS2Q07890 1332 aaPredicted RBP28.4■■■□□ 2.14
EGFR-204ENST00000420316 TOPAZ1Q8N9V7 1692 aa28.4■■■□□ 2.14
EGFR-204ENST00000420316 NHSL1Q5SYE7 1610 aa28.4■■■□□ 2.14
EGFR-204ENST00000420316 XPCQ01831 940 aaPredicted RBP28.4■■■□□ 2.14
EGFR-204ENST00000420316 PHLPP1O60346 1717 aa28.39■■■□□ 2.14
EGFR-204ENST00000420316 ITSN1Q15811 1721 aa28.39■■■□□ 2.14
EGFR-204ENST00000420316 TMF1P82094 1093 aa28.39■■■□□ 2.14
EGFR-204ENST00000420316 KIF1AQ12756 1690 aa28.38■■■□□ 2.13
EGFR-204ENST00000420316 LRRC59Q96AG4 307 aaKnown RBP28.37■■■□□ 2.13
EGFR-204ENST00000420316 PUS7Q96PZ0 661 aaKnown RBP28.37■■■□□ 2.13
EGFR-204ENST00000420316 PPIP5K1Q6PFW1 1433 aa28.37■■■□□ 2.13
EGFR-204ENST00000420316 PLEKHG3A1L390 1219 aa28.37■■■□□ 2.13
EGFR-204ENST00000420316 POLR3GLQ9BT43 218 aa28.37■■■□□ 2.13
EGFR-204ENST00000420316 COL16A1Q07092 1604 aaPredicted RBP28.36■■■□□ 2.13
EGFR-204ENST00000420316 CABP1Q9NZU7 370 aa28.36■■■□□ 2.13
EGFR-204ENST00000420316 C11orf95C9JLR9 678 aaPredicted RBP28.34■■■□□ 2.13
EGFR-204ENST00000420316 ATAD2Q6PL18 1390 aa28.34■■■□□ 2.13
EGFR-204ENST00000420316 PSME1Q06323 249 aa28.33■■■□□ 2.13
EGFR-204ENST00000420316 KRT28Q7Z3Y7 464 aa28.33■■■□□ 2.13
EGFR-204ENST00000420316 NGDNQ8NEJ9 315 aaKnown RBP28.33■■■□□ 2.13
EGFR-204ENST00000420316 JCADQ9P266 1359 aa28.32■■■□□ 2.12
EGFR-204ENST00000420316 PXDNQ92626 1479 aa28.32■■■□□ 2.12
EGFR-204ENST00000420316 TMC1Q8TDI8 760 aa28.32■■■□□ 2.12
EGFR-204ENST00000420316 ACEP12821 1306 aa28.3■■■□□ 2.12
EGFR-204ENST00000420316 POLR3AO14802 1390 aaPredicted RBP28.3■■■□□ 2.12
EGFR-204ENST00000420316 SLC12A5Q9H2X9 1139 aa28.28■■■□□ 2.12
EGFR-204ENST00000420316 CDCA8Q53HL2 280 aa28.28■■■□□ 2.12
EGFR-204ENST00000420316 SBNO1A3KN83 1393 aa28.25■■■□□ 2.11
EGFR-204ENST00000420316 SPATA31A3Q5VYP0 1347 aa28.24■■■□□ 2.11
EGFR-204ENST00000420316 MYOM1P52179 1685 aa28.23■■■□□ 2.11
EGFR-204ENST00000420316 PNPLA6Q8IY17 1366 aa28.22■■■□□ 2.11
EGFR-204ENST00000420316 SPATA31A6Q5VVP1 1343 aa28.21■■■□□ 2.11
EGFR-204ENST00000420316 ZNF692Q9BU19 519 aaPredicted RBP28.21■■■□□ 2.11
EGFR-204ENST00000420316 AKAP12Q02952 1782 aa28.2■■■□□ 2.11
EGFR-204ENST00000420316 CD163L1Q9NR16 1453 aa28.2■■■□□ 2.1
EGFR-204ENST00000420316 KIF7Q2M1P5 1343 aa28.2■■■□□ 2.1
EGFR-204ENST00000420316 PLEKHG5O94827 1062 aa28.2■■■□□ 2.1
EGFR-204ENST00000420316 TRPM3Q9HCF6 1732 aaPredicted RBP28.19■■■□□ 2.1
EGFR-204ENST00000420316 PAK3O75914 559 aaPredicted RBP28.19■■■□□ 2.1
EGFR-204ENST00000420316 NINLQ9Y2I6 1382 aa28.19■■■□□ 2.1
EGFR-204ENST00000420316 SHPRHQ149N8 1683 aa28.19■■■□□ 2.1
EGFR-204ENST00000420316 TNS3Q68CZ2 1445 aa28.18■■■□□ 2.1
EGFR-204ENST00000420316 LMOD2Q6P5Q4 547 aa28.18■■■□□ 2.1
EGFR-204ENST00000420316 BRD4O60885 1362 aaPredicted RBP28.18■■■□□ 2.1
EGFR-204ENST00000420316 CPSF1Q10570 1443 aaKnown RBP28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms