RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 EXOC6Q8TAG9 804 aa20.34■□□□□ 0.85
SEC24D-202ENST00000419654 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
SEC24D-202ENST00000419654 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
SEC24D-202ENST00000419654 PUS7Q96PZ0 661 aaKnown RBP20.34■□□□□ 0.85
SEC24D-202ENST00000419654 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
SEC24D-202ENST00000419654 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
SEC24D-202ENST00000419654 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
SEC24D-202ENST00000419654 PLIN1O60240 522 aa20.32■□□□□ 0.84
SEC24D-202ENST00000419654 STK26Q9P289 416 aa20.32■□□□□ 0.84
SEC24D-202ENST00000419654 TMEM2Q9UHN6 1383 aa20.32■□□□□ 0.84
SEC24D-202ENST00000419654 CEBPAP49715 358 aaPredicted RBP20.32■□□□□ 0.84
SEC24D-202ENST00000419654 RCAN3Q9UKA8 241 aa20.31■□□□□ 0.84
SEC24D-202ENST00000419654 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
SEC24D-202ENST00000419654 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
SEC24D-202ENST00000419654 DLC1Q96QB1 1528 aa20.3■□□□□ 0.84
SEC24D-202ENST00000419654 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
SEC24D-202ENST00000419654 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
SEC24D-202ENST00000419654 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
SEC24D-202ENST00000419654 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
SEC24D-202ENST00000419654 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
SEC24D-202ENST00000419654 SAFB2Q14151 953 aaKnown RBP eCLIP20.25■□□□□ 0.83
SEC24D-202ENST00000419654 SKAP1Q86WV1 359 aa20.25■□□□□ 0.83
SEC24D-202ENST00000419654 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
SEC24D-202ENST00000419654 POGKQ9P215 609 aa20.24■□□□□ 0.83
SEC24D-202ENST00000419654 METP08581 1390 aa20.24■□□□□ 0.83
SEC24D-202ENST00000419654 SLIT1O75093 1534 aa20.22■□□□□ 0.83
SEC24D-202ENST00000419654 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
SEC24D-202ENST00000419654 ADAMTS8Q9UP79 889 aa20.22■□□□□ 0.83
SEC24D-202ENST00000419654 ARHGAP23Q9P227 1491 aa20.22■□□□□ 0.83
SEC24D-202ENST00000419654 USP32Q8NFA0 1604 aa20.22■□□□□ 0.83
SEC24D-202ENST00000419654 PPP2R1AP30153 589 aa20.21■□□□□ 0.83
SEC24D-202ENST00000419654 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
SEC24D-202ENST00000419654 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
SEC24D-202ENST00000419654 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
SEC24D-202ENST00000419654 MINK1Q8N4C8 1332 aaPredicted RBP20.2■□□□□ 0.83
SEC24D-202ENST00000419654 NINLQ9Y2I6 1382 aa20.2■□□□□ 0.82
SEC24D-202ENST00000419654 NBR1Q14596 966 aa20.2■□□□□ 0.82
SEC24D-202ENST00000419654 ADAMTS13Q76LX8 1427 aa20.2■□□□□ 0.82
SEC24D-202ENST00000419654 LTKP29376 864 aa20.2■□□□□ 0.82
SEC24D-202ENST00000419654 TECPR2O15040 1411 aa20.2■□□□□ 0.82
SEC24D-202ENST00000419654 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
SEC24D-202ENST00000419654 RIMS1Q86UR5 1692 aaKnown RBP20.19■□□□□ 0.82
SEC24D-202ENST00000419654 ANKRD36BQ8N2N9 1353 aa20.19■□□□□ 0.82
SEC24D-202ENST00000419654 ADAMTSL3P82987 1691 aa20.18■□□□□ 0.82
SEC24D-202ENST00000419654 INSRP06213 1382 aa20.18■□□□□ 0.82
SEC24D-202ENST00000419654 ATAD2Q6PL18 1390 aa20.18■□□□□ 0.82
SEC24D-202ENST00000419654 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
SEC24D-202ENST00000419654 CPS1P31327 1500 aa20.17■□□□□ 0.82
SEC24D-202ENST00000419654 SIRT1Q96EB6 747 aa20.17■□□□□ 0.82
SEC24D-202ENST00000419654 MED14O60244 1454 aa20.17■□□□□ 0.82
SEC24D-202ENST00000419654 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
SEC24D-202ENST00000419654 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
SEC24D-202ENST00000419654 FAM135BQ49AJ0 1406 aa20.16■□□□□ 0.82
SEC24D-202ENST00000419654 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
SEC24D-202ENST00000419654 NOP58Q9Y2X3 529 aaKnown RBP20.16■□□□□ 0.82
SEC24D-202ENST00000419654 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
SEC24D-202ENST00000419654 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.82
SEC24D-202ENST00000419654 THEMISQ8N1K5 641 aaPredicted RBP20.14■□□□□ 0.82
SEC24D-202ENST00000419654 CDK19Q9BWU1 502 aa20.14■□□□□ 0.82
SEC24D-202ENST00000419654 EID1Q9Y6B2 187 aa20.14■□□□□ 0.82
SEC24D-202ENST00000419654 C20orf194Q5TEA3 1177 aa20.14■□□□□ 0.81
SEC24D-202ENST00000419654 CRBNQ96SW2 442 aa20.14■□□□□ 0.81
SEC24D-202ENST00000419654 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
SEC24D-202ENST00000419654 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.817e-6■■■■■ 27.3
SEC24D-202ENST00000419654 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
SEC24D-202ENST00000419654 ANP32AP39687 249 aaKnown RBP20.12■□□□□ 0.81
SEC24D-202ENST00000419654 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
SEC24D-202ENST00000419654 A0A1W2PP64 1363 aa20.11■□□□□ 0.81
SEC24D-202ENST00000419654 CD163L1Q9NR16 1453 aa20.11■□□□□ 0.81
SEC24D-202ENST00000419654 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
SEC24D-202ENST00000419654 NSD2O96028 1365 aa20.09■□□□□ 0.81
SEC24D-202ENST00000419654 ZNF142P52746 1687 aaPredicted RBP20.08■□□□□ 0.8
SEC24D-202ENST00000419654 DIP2AQ14689 1571 aa20.08■□□□□ 0.8
SEC24D-202ENST00000419654 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.8
SEC24D-202ENST00000419654 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
SEC24D-202ENST00000419654 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
SEC24D-202ENST00000419654 TBX22Q9Y458 520 aa20.06■□□□□ 0.8
SEC24D-202ENST00000419654 PTPRUQ92729 1446 aa20.06■□□□□ 0.8
SEC24D-202ENST00000419654 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
SEC24D-202ENST00000419654 SLC26A8Q96RN1 970 aa20.05■□□□□ 0.8
SEC24D-202ENST00000419654 IPO9Q96P70 1041 aaKnown RBP20.05■□□□□ 0.8
SEC24D-202ENST00000419654 ATP7BP35670 1465 aa20.04■□□□□ 0.8
SEC24D-202ENST00000419654 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
SEC24D-202ENST00000419654 SETD1BQ9UPS6 1966 aaKnown RBP20.04■□□□□ 0.8
SEC24D-202ENST00000419654 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
SEC24D-202ENST00000419654 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
SEC24D-202ENST00000419654 CABP1Q9NZU7 370 aa20.04■□□□□ 0.8
SEC24D-202ENST00000419654 POLR3AO14802 1390 aaPredicted RBP20.03■□□□□ 0.8
SEC24D-202ENST00000419654 PDE4AP27815 886 aa20.03■□□□□ 0.8
SEC24D-202ENST00000419654 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
SEC24D-202ENST00000419654 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.03■□□□□ 0.8
SEC24D-202ENST00000419654 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.8
SEC24D-202ENST00000419654 HDGFL2Q7Z4V5 671 aaPredicted RBP20.02■□□□□ 0.8
SEC24D-202ENST00000419654 APAF1O14727 1248 aa20■□□□□ 0.79
SEC24D-202ENST00000419654 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
SEC24D-202ENST00000419654 PTCH1Q13635 1447 aa20■□□□□ 0.79
SEC24D-202ENST00000419654 DUSP27Q5VZP5 1158 aa20■□□□□ 0.79
SEC24D-202ENST00000419654 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
SEC24D-202ENST00000419654 XRN1Q8IZH2 1706 aaKnown RBP19.98■□□□□ 0.79
SEC24D-202ENST00000419654 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms