RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 ADGRL3Q9HAR2 1447 aa26.09■■□□□ 1.77
SEMA3B-202ENST00000418576 XIRP1Q702N8 1843 aaKnown RBP26.08■■□□□ 1.77
SEMA3B-202ENST00000418576 USP47Q96K76 1375 aa26.08■■□□□ 1.76
SEMA3B-202ENST00000418576 ATF3P18847 181 aa26.07■■□□□ 1.76
SEMA3B-202ENST00000418576 CADPS2Q86UW7 1296 aa26.06■■□□□ 1.76
SEMA3B-202ENST00000418576 MINK1Q8N4C8 1332 aaPredicted RBP26.05■■□□□ 1.76
SEMA3B-202ENST00000418576 DCCP43146 1447 aa26.04■■□□□ 1.76
SEMA3B-202ENST00000418576 EIF4G2P78344 907 aaKnown RBP eCLIP26.04■■□□□ 1.76
SEMA3B-202ENST00000418576 ST20-MTHFSA0A0A6YYL1 179 aa26.03■■□□□ 1.76
SEMA3B-202ENST00000418576 HIRIP3Q9BW71 556 aaPredicted RBP26.03■■□□□ 1.76
SEMA3B-202ENST00000418576 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.03■■□□□ 1.76
SEMA3B-202ENST00000418576 NALCNQ8IZF0 1738 aa26.03■■□□□ 1.76
SEMA3B-202ENST00000418576 SLC24A1O60721 1099 aa26.02■■□□□ 1.76
SEMA3B-202ENST00000418576 TOM1O60784 492 aa26.02■■□□□ 1.76
SEMA3B-202ENST00000418576 QRICH2Q9H0J4 1663 aa25.99■■□□□ 1.75
SEMA3B-202ENST00000418576 SBNO2Q9Y2G9 1366 aa25.98■■□□□ 1.75
SEMA3B-202ENST00000418576 UBAP1LF5GYI3 381 aa25.98■■□□□ 1.75
SEMA3B-202ENST00000418576 CDC42BPGQ6DT37 1551 aa25.98■■□□□ 1.75
SEMA3B-202ENST00000418576 WASLO00401 505 aaPredicted RBP25.97■■□□□ 1.75
SEMA3B-202ENST00000418576 ADGRB2O60241 1585 aa25.97■■□□□ 1.75
SEMA3B-202ENST00000418576 EVC2Q86UK5 1308 aa25.95■■□□□ 1.75
SEMA3B-202ENST00000418576 SLAIN2Q9P270 581 aa25.95■■□□□ 1.75
SEMA3B-202ENST00000418576 HSPA5P11021 654 aaKnown RBP25.95■■□□□ 1.74
SEMA3B-202ENST00000418576 CDK19Q9BWU1 502 aa25.94■■□□□ 1.74
SEMA3B-202ENST00000418576 TESK2Q96S53 571 aa25.93■■□□□ 1.74
SEMA3B-202ENST00000418576 NUTM2FA1L443 756 aa25.91■■□□□ 1.74
SEMA3B-202ENST00000418576 SRPK2P78362 688 aaKnown RBP25.91■■□□□ 1.74
SEMA3B-202ENST00000418576 MST1RQ04912 1400 aa25.9■■□□□ 1.74
SEMA3B-202ENST00000418576 TMF1P82094 1093 aa25.9■■□□□ 1.74
SEMA3B-202ENST00000418576 PIP4K2BP78356 416 aa25.88■■□□□ 1.73
SEMA3B-202ENST00000418576 C1orf167Q5SNV9 1468 aa25.87■■□□□ 1.73
SEMA3B-202ENST00000418576 FMN2Q9NZ56 1722 aa25.87■■□□□ 1.73
SEMA3B-202ENST00000418576 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
SEMA3B-202ENST00000418576 ANKARQ7Z5J8 1434 aa25.87■■□□□ 1.73
SEMA3B-202ENST00000418576 TULP4Q9NRJ4 1543 aa25.86■■□□□ 1.73
SEMA3B-202ENST00000418576 CABP2Q9NPB3 220 aa25.86■■□□□ 1.73
SEMA3B-202ENST00000418576 CDCA8Q53HL2 280 aa25.85■■□□□ 1.73
SEMA3B-202ENST00000418576 ESCO1Q5FWF5 840 aa25.84■■□□□ 1.73
SEMA3B-202ENST00000418576 NUDT16Q96DE0 195 aaKnown RBP25.84■■□□□ 1.73
SEMA3B-202ENST00000418576 PUS7Q96PZ0 661 aaKnown RBP25.82■■□□□ 1.72
SEMA3B-202ENST00000418576 CCDC61Q9Y6R9 512 aa25.82■■□□□ 1.72
SEMA3B-202ENST00000418576 ORAI2Q96SN7 254 aa25.82■■□□□ 1.72
SEMA3B-202ENST00000418576 PRR36Q9H6K5 1346 aa25.81■■□□□ 1.72
SEMA3B-202ENST00000418576 BRINP3Q76B58 766 aa25.81■■□□□ 1.72
SEMA3B-202ENST00000418576 FBXO41Q8TF61 875 aa25.8■■□□□ 1.72
SEMA3B-202ENST00000418576 ATAD2Q6PL18 1390 aa25.8■■□□□ 1.72
SEMA3B-202ENST00000418576 DISP3Q9P2K9 1392 aa25.8■■□□□ 1.72
SEMA3B-202ENST00000418576 ATP7BP35670 1465 aa25.79■■□□□ 1.72
SEMA3B-202ENST00000418576 PHF8Q9UPP1 1060 aa25.77■■□□□ 1.72
SEMA3B-202ENST00000418576 USP32Q8NFA0 1604 aa25.77■■□□□ 1.72
SEMA3B-202ENST00000418576 ROBO1Q9Y6N7 1651 aa25.75■■□□□ 1.71
SEMA3B-202ENST00000418576 PMFBP1Q8TBY8 1022 aa25.74■■□□□ 1.71
SEMA3B-202ENST00000418576 PPIP5K1Q6PFW1 1433 aa25.73■■□□□ 1.71
SEMA3B-202ENST00000418576 RGPD8O14715 1765 aaPredicted RBP25.73■■□□□ 1.71
SEMA3B-202ENST00000418576 CABP1Q9NZU7 370 aa25.73■■□□□ 1.71
SEMA3B-202ENST00000418576 ITSN1Q15811 1721 aa25.73■■□□□ 1.71
SEMA3B-202ENST00000418576 TMC1Q8TDI8 760 aa25.72■■□□□ 1.71
SEMA3B-202ENST00000418576 PLEKHG3A1L390 1219 aa25.72■■□□□ 1.71
SEMA3B-202ENST00000418576 FOXO3O43524 673 aa25.72■■□□□ 1.71
SEMA3B-202ENST00000418576 NGDNQ8NEJ9 315 aaKnown RBP25.72■■□□□ 1.71
SEMA3B-202ENST00000418576 NPHP3Q7Z494 1330 aa25.71■■□□□ 1.71
SEMA3B-202ENST00000418576 KIF1AQ12756 1690 aa25.7■■□□□ 1.71
SEMA3B-202ENST00000418576 POLR3GLQ9BT43 218 aa25.7■■□□□ 1.7
SEMA3B-202ENST00000418576 NINLQ9Y2I6 1382 aa25.7■■□□□ 1.7
SEMA3B-202ENST00000418576 TOPAZ1Q8N9V7 1692 aa25.68■■□□□ 1.7
SEMA3B-202ENST00000418576 C11orf95C9JLR9 678 aaPredicted RBP25.68■■□□□ 1.7
SEMA3B-202ENST00000418576 PSME1Q06323 249 aa25.68■■□□□ 1.7
SEMA3B-202ENST00000418576 ACEP12821 1306 aa25.67■■□□□ 1.7
SEMA3B-202ENST00000418576 DDX17Q92841 729 aaKnown RBP25.66■■□□□ 1.7
SEMA3B-202ENST00000418576 SLC12A5Q9H2X9 1139 aa25.66■■□□□ 1.7
SEMA3B-202ENST00000418576 POLR3AO14802 1390 aaPredicted RBP25.65■■□□□ 1.7
SEMA3B-202ENST00000418576 KIF7Q2M1P5 1343 aa25.64■■□□□ 1.7
SEMA3B-202ENST00000418576 ZNF692Q9BU19 519 aaPredicted RBP25.64■■□□□ 1.69
SEMA3B-202ENST00000418576 TERF2IPQ9NYB0 399 aa25.64■■□□□ 1.69
SEMA3B-202ENST00000418576 AHDC1Q5TGY3 1603 aaPredicted RBP25.63■■□□□ 1.69
SEMA3B-202ENST00000418576 KRT28Q7Z3Y7 464 aa25.63■■□□□ 1.69
SEMA3B-202ENST00000418576 HDGFL2Q7Z4V5 671 aaPredicted RBP25.62■■□□□ 1.69
SEMA3B-202ENST00000418576 SOS2Q07890 1332 aaPredicted RBP25.62■■□□□ 1.69
SEMA3B-202ENST00000418576 NHSL1Q5SYE7 1610 aa25.62■■□□□ 1.69
SEMA3B-202ENST00000418576 XPCQ01831 940 aaPredicted RBP25.61■■□□□ 1.69
SEMA3B-202ENST00000418576 HSPA1LP34931 641 aa25.61■■□□□ 1.69
SEMA3B-202ENST00000418576 CCDC7Q96M83 1385 aa25.59■■□□□ 1.69
SEMA3B-202ENST00000418576 WASHC2AQ641Q2 1341 aa25.59■■□□□ 1.69
SEMA3B-202ENST00000418576 LRRC59Q96AG4 307 aaKnown RBP25.59■■□□□ 1.69
SEMA3B-202ENST00000418576 PHLPP1O60346 1717 aa25.59■■□□□ 1.69
SEMA3B-202ENST00000418576 CPSF1Q10570 1443 aaKnown RBP25.58■■□□□ 1.69
SEMA3B-202ENST00000418576 PXDNQ92626 1479 aa25.58■■□□□ 1.68
SEMA3B-202ENST00000418576 KTN1Q86UP2 1357 aaKnown RBP25.56■■□□□ 1.68
SEMA3B-202ENST00000418576 ANKRD36BQ8N2N9 1353 aa25.56■■□□□ 1.68
SEMA3B-202ENST00000418576 BRD4O60885 1362 aaPredicted RBP25.56■■□□□ 1.68
SEMA3B-202ENST00000418576 A0A1W2PP64 1363 aa25.55■■□□□ 1.68
SEMA3B-202ENST00000418576 PAK3O75914 559 aaPredicted RBP25.55■■□□□ 1.68
SEMA3B-202ENST00000418576 USP6P35125 1406 aa25.55■■□□□ 1.68
SEMA3B-202ENST00000418576 CD163L1Q9NR16 1453 aa25.54■■□□□ 1.68
SEMA3B-202ENST00000418576 SBNO1A3KN83 1393 aa25.54■■□□□ 1.68
SEMA3B-202ENST00000418576 COL16A1Q07092 1604 aaPredicted RBP25.53■■□□□ 1.68
SEMA3B-202ENST00000418576 MYOM1P52179 1685 aa25.52■■□□□ 1.68
SEMA3B-202ENST00000418576 SPATA31A3Q5VYP0 1347 aa25.51■■□□□ 1.67
SEMA3B-202ENST00000418576 LMOD2Q6P5Q4 547 aa25.51■■□□□ 1.67
SEMA3B-202ENST00000418576 ILDR1Q86SU0 546 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms