RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 POTEAQ6S8J7 498 aa10.47□□□□□ -0.73
COPS3-202ENST00000417352 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
COPS3-202ENST00000417352 LHX8Q68G74 356 aa10.46□□□□□ -0.73
COPS3-202ENST00000417352 JCADQ9P266 1359 aa10.46□□□□□ -0.74
COPS3-202ENST00000417352 ADAMTS13Q76LX8 1427 aa10.46□□□□□ -0.74
COPS3-202ENST00000417352 TRPM2O94759 1503 aa10.46□□□□□ -0.74
COPS3-202ENST00000417352 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.45□□□□□ -0.74
COPS3-202ENST00000417352 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
COPS3-202ENST00000417352 ZRANB1Q9UGI0 708 aa10.44□□□□□ -0.74
COPS3-202ENST00000417352 KIF1BO60333 1816 aa10.44□□□□□ -0.74
COPS3-202ENST00000417352 DIP2AQ14689 1571 aa10.43□□□□□ -0.74
COPS3-202ENST00000417352 PIK3R4Q99570 1358 aa10.43□□□□□ -0.74
COPS3-202ENST00000417352 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
COPS3-202ENST00000417352 PTPRUQ92729 1446 aa10.42□□□□□ -0.74
COPS3-202ENST00000417352 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
COPS3-202ENST00000417352 METP08581 1390 aa10.42□□□□□ -0.74
COPS3-202ENST00000417352 RGL3Q3MIN7 710 aa10.42□□□□□ -0.74
COPS3-202ENST00000417352 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
COPS3-202ENST00000417352 ZNF579Q8NAF0 562 aaKnown RBP10.42□□□□□ -0.74
COPS3-202ENST00000417352 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
COPS3-202ENST00000417352 NAIPQ13075 1403 aa10.41□□□□□ -0.74
COPS3-202ENST00000417352 CLTCL1P53675 1640 aa10.4□□□□□ -0.74
COPS3-202ENST00000417352 SPATA31A6Q5VVP1 1343 aa10.4□□□□□ -0.74
COPS3-202ENST00000417352 ZNF772Q68DY9 489 aaPredicted RBP10.4□□□□□ -0.74
COPS3-202ENST00000417352 RRBP1Q9P2E9 1410 aaKnown RBP10.4□□□□□ -0.75
COPS3-202ENST00000417352 LRRC59Q96AG4 307 aaKnown RBP10.39□□□□□ -0.75
COPS3-202ENST00000417352 STK26Q9P289 416 aa10.39□□□□□ -0.75
COPS3-202ENST00000417352 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
COPS3-202ENST00000417352 ADAMTS2O95450 1211 aa10.38□□□□□ -0.75
COPS3-202ENST00000417352 C8orf37Q96NL8 207 aa10.38□□□□□ -0.75
COPS3-202ENST00000417352 DCBLD2Q96PD2 775 aa10.38□□□□□ -0.75
COPS3-202ENST00000417352 SETBP1Q9Y6X0 1596 aa10.38□□□□□ -0.75
COPS3-202ENST00000417352 NRXN3Q9Y4C0 1643 aa10.37□□□□□ -0.75
COPS3-202ENST00000417352 SETD1AO15047 1707 aaKnown RBP10.37□□□□□ -0.75
COPS3-202ENST00000417352 RXRBP28702 533 aa10.37□□□□□ -0.75
COPS3-202ENST00000417352 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
COPS3-202ENST00000417352 NGLY1Q96IV0 654 aa10.36□□□□□ -0.75
COPS3-202ENST00000417352 NEXMIFQ5QGS0 1516 aa10.36□□□□□ -0.75
COPS3-202ENST00000417352 LRP6O75581 1613 aa10.36□□□□□ -0.75
COPS3-202ENST00000417352 AFF2P51816 1311 aa10.35□□□□□ -0.75
COPS3-202ENST00000417352 RPGRIP1LQ68CZ1 1315 aa10.35□□□□□ -0.75
COPS3-202ENST00000417352 ASXL1Q8IXJ9 1541 aa10.35□□□□□ -0.75
COPS3-202ENST00000417352 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
COPS3-202ENST00000417352 ORAI2Q96SN7 254 aa10.35□□□□□ -0.75
COPS3-202ENST00000417352 AHDC1Q5TGY3 1603 aaPredicted RBP10.35□□□□□ -0.75
COPS3-202ENST00000417352 XRN1Q8IZH2 1706 aaKnown RBP10.35□□□□□ -0.75
COPS3-202ENST00000417352 HFM1A2PYH4 1435 aa10.34□□□□□ -0.75
COPS3-202ENST00000417352 MST1RQ04912 1400 aa10.34□□□□□ -0.75
COPS3-202ENST00000417352 PAK3O75914 559 aaPredicted RBP10.34□□□□□ -0.75
COPS3-202ENST00000417352 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
COPS3-202ENST00000417352 MPHOSPH9Q99550 1183 aa10.34□□□□□ -0.75
COPS3-202ENST00000417352 QTRT2Q9H974 415 aaKnown RBP10.34□□□□□ -0.75
COPS3-202ENST00000417352 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
COPS3-202ENST00000417352 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
COPS3-202ENST00000417352 DCCP43146 1447 aa10.33□□□□□ -0.76
COPS3-202ENST00000417352 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
COPS3-202ENST00000417352 NALCNQ8IZF0 1738 aa10.33□□□□□ -0.76
COPS3-202ENST00000417352 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
COPS3-202ENST00000417352 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
COPS3-202ENST00000417352 TMEM132EQ6IEE7 984 aa10.33□□□□□ -0.76
COPS3-202ENST00000417352 ROBO2Q9HCK4 1378 aa10.33□□□□□ -0.76
COPS3-202ENST00000417352 WAPLQ7Z5K2 1190 aa10.32□□□□□ -0.76
COPS3-202ENST00000417352 ADGRF5Q8IZF2 1346 aa10.32□□□□□ -0.76
COPS3-202ENST00000417352 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
COPS3-202ENST00000417352 PPLO60437 1756 aa10.31□□□□□ -0.76
COPS3-202ENST00000417352 C1orf167Q5SNV9 1468 aa10.3□□□□□ -0.76
COPS3-202ENST00000417352 FOXO3O43524 673 aa10.3□□□□□ -0.76
COPS3-202ENST00000417352 SETD5Q9C0A6 1442 aa10.3□□□□□ -0.76
COPS3-202ENST00000417352 NHSL1Q5SYE7 1610 aa10.29□□□□□ -0.76
COPS3-202ENST00000417352 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
COPS3-202ENST00000417352 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.76
COPS3-202ENST00000417352 USP21Q9UK80 565 aa10.29□□□□□ -0.76
COPS3-202ENST00000417352 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
COPS3-202ENST00000417352 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
COPS3-202ENST00000417352 LMOD2Q6P5Q4 547 aa10.28□□□□□ -0.76
COPS3-202ENST00000417352 PROM2Q8N271 834 aa10.28□□□□□ -0.76
COPS3-202ENST00000417352 UPF1Q92900 1129 aaKnown RBP eCLIP10.28□□□□□ -0.76
COPS3-202ENST00000417352 PHF12Q96QT6 1004 aa10.28□□□□□ -0.76
COPS3-202ENST00000417352 PTCH1Q13635 1447 aa10.27□□□□□ -0.77
COPS3-202ENST00000417352 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
COPS3-202ENST00000417352 NPHP3Q7Z494 1330 aa10.27□□□□□ -0.77
COPS3-202ENST00000417352 ANKRD30BQ9BXX2 1392 aa10.26□□□□□ -0.77
COPS3-202ENST00000417352 POGKQ9P215 609 aa10.26□□□□□ -0.77
COPS3-202ENST00000417352 SOS2Q07890 1332 aaPredicted RBP10.25□□□□□ -0.77
COPS3-202ENST00000417352 LRPPRCP42704 1394 aaKnown RBP10.25□□□□□ -0.77
COPS3-202ENST00000417352 CFAP70Q5T0N1 1121 aa10.24□□□□□ -0.77
COPS3-202ENST00000417352 TRPC5Q9UL62 973 aaPredicted RBP10.24□□□□□ -0.77
COPS3-202ENST00000417352 PLEKHH1Q9ULM0 1364 aa10.24□□□□□ -0.77
COPS3-202ENST00000417352 PSME1Q06323 249 aa10.23□□□□□ -0.77
COPS3-202ENST00000417352 KRT28Q7Z3Y7 464 aa10.23□□□□□ -0.77
COPS3-202ENST00000417352 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
COPS3-202ENST00000417352 DHX57Q6P158 1386 aaKnown RBP10.23□□□□□ -0.77
COPS3-202ENST00000417352 PRAM1Q96QH2 718 aa10.22□□□□□ -0.77
COPS3-202ENST00000417352 ACIN1Q9UKV3 1341 aaKnown RBP10.22□□□□□ -0.77
COPS3-202ENST00000417352 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
COPS3-202ENST00000417352 YTHDC2Q9H6S0 1430 aaKnown RBP10.22□□□□□ -0.77
COPS3-202ENST00000417352 DCAF11Q8TEB1 546 aa10.21□□□□□ -0.77
COPS3-202ENST00000417352 HIRIP3Q9BW71 556 aaPredicted RBP10.21□□□□□ -0.77
COPS3-202ENST00000417352 C14orf93Q9H972 538 aaKnown RBP10.21□□□□□ -0.77
COPS3-202ENST00000417352 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms