RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	TSPY4	P0CV99	314 aa		14.03	□□□□□ -0.16
NIF3L1-206	ENST00000416651	TSPY10	P0CW01	314 aa		14.03	□□□□□ -0.16
NIF3L1-206	ENST00000416651	IER5L	Q5T953	404 aa		14.03	□□□□□ -0.16
NIF3L1-206	ENST00000416651	SPATA31A6	Q5VVP1	1343 aa		14.03	□□□□□ -0.16
NIF3L1-206	ENST00000416651	KDM5A	P29375	1690 aa	Known RBP	14.02	□□□□□ -0.16
NIF3L1-206	ENST00000416651	SHPRH	Q149N8	1683 aa		14.01	□□□□□ -0.17
NIF3L1-206	ENST00000416651	DIP2A	Q14689	1571 aa		14.01	□□□□□ -0.17
NIF3L1-206	ENST00000416651	MAST1	Q9Y2H9	1570 aa		14.01	□□□□□ -0.17
NIF3L1-206	ENST00000416651	NKTR	P30414	1462 aa	Known RBP	14.01	□□□□□ -0.17
NIF3L1-206	ENST00000416651	EIF2AK4	Q9P2K8	1649 aa	Known RBP	14.01	□□□□□ -0.17
NIF3L1-206	ENST00000416651	EFCAB6	Q5THR3	1501 aa		14	□□□□□ -0.17
NIF3L1-206	ENST00000416651	CDK12	Q9NYV4	1490 aa	Predicted RBP	14	□□□□□ -0.17
NIF3L1-206	ENST00000416651	FGD6	Q6ZV73	1430 aa		14	□□□□□ -0.17
NIF3L1-206	ENST00000416651	NUBP1	P53384	320 aa		14	□□□□□ -0.17
NIF3L1-206	ENST00000416651	RSPH4A	Q5TD94	716 aa		14	□□□□□ -0.17
NIF3L1-206	ENST00000416651	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14	□□□□□ -0.17
NIF3L1-206	ENST00000416651	ARHGAP31	Q2M1Z3	1444 aa		13.99	□□□□□ -0.17
NIF3L1-206	ENST00000416651	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.99	□□□□□ -0.17
NIF3L1-206	ENST00000416651	BCAN	Q96GW7	911 aa		13.99	□□□□□ -0.17
NIF3L1-206	ENST00000416651	CHD2	O14647	1828 aa	Known RBP	13.99	□□□□□ -0.17
NIF3L1-206	ENST00000416651	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.98	□□□□□ -0.17
NIF3L1-206	ENST00000416651	DDX17	Q92841	729 aa	Known RBP	13.98	□□□□□ -0.17
NIF3L1-206	ENST00000416651	QTRT2	Q9H974	415 aa	Known RBP	13.98	□□□□□ -0.17
NIF3L1-206	ENST00000416651	IFNL1	Q8IU54	200 aa		13.97	□□□□□ -0.17
NIF3L1-206	ENST00000416651	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.96	□□□□□ -0.17
NIF3L1-206	ENST00000416651	BRINP3	Q76B58	766 aa		13.96	□□□□□ -0.17
NIF3L1-206	ENST00000416651	C8orf37	Q96NL8	207 aa		13.96	□□□□□ -0.17
NIF3L1-206	ENST00000416651	RRP7BP	Q9NSQ0	103 aa		13.94	□□□□□ -0.18
NIF3L1-206	ENST00000416651	MYO5B	Q9ULV0	1848 aa		13.94	□□□□□ -0.18
NIF3L1-206	ENST00000416651	RBM6	P78332	1123 aa	Known RBP	13.93	□□□□□ -0.18
NIF3L1-206	ENST00000416651	C14orf37	Q86TY3	774 aa		13.93	□□□□□ -0.18
NIF3L1-206	ENST00000416651	TMEM106C	Q9BVX2	250 aa		13.93	□□□□□ -0.18
NIF3L1-206	ENST00000416651	ADGRB3	O60242	1522 aa		13.92	□□□□□ -0.18
NIF3L1-206	ENST00000416651	DUOX2	Q9NRD8	1548 aa		13.92	□□□□□ -0.18
NIF3L1-206	ENST00000416651	CDAN1	Q8IWY9	1227 aa		13.92	□□□□□ -0.18
NIF3L1-206	ENST00000416651	SLAIN1	Q8ND83	568 aa		13.92	□□□□□ -0.18
NIF3L1-206	ENST00000416651	FAM212A	Q96EL1	285 aa		13.92	□□□□□ -0.18
NIF3L1-206	ENST00000416651	ZFYVE9	O95405	1425 aa		13.91	□□□□□ -0.18
NIF3L1-206	ENST00000416651	KIF15	Q9NS87	1388 aa		13.9	□□□□□ -0.18
NIF3L1-206	ENST00000416651	NOS1	P29475	1434 aa		13.9	□□□□□ -0.19
NIF3L1-206	ENST00000416651	ADAMTS2	O95450	1211 aa		13.89	□□□□□ -0.19
NIF3L1-206	ENST00000416651	ADAMTS13	Q76LX8	1427 aa		13.89	□□□□□ -0.19
NIF3L1-206	ENST00000416651	PTPRU	Q92729	1446 aa		13.89	□□□□□ -0.19
NIF3L1-206	ENST00000416651	PLEKHG1	Q9ULL1	1385 aa		13.88	□□□□□ -0.19
NIF3L1-206	ENST00000416651	ATF3	P18847	181 aa		13.88	□□□□□ -0.19
NIF3L1-206	ENST00000416651	KANK4	Q5T7N3	995 aa	Predicted RBP	13.88	□□□□□ -0.19
NIF3L1-206	ENST00000416651	CADPS2	Q86UW7	1296 aa		13.88	□□□□□ -0.19
NIF3L1-206	ENST00000416651	C19orf44	Q9H6X5	657 aa		13.88	□□□□□ -0.19
NIF3L1-206	ENST00000416651	RIMS2	Q9UQ26	1411 aa		13.88	□□□□□ -0.19
NIF3L1-206	ENST00000416651	ASXL1	Q8IXJ9	1541 aa		13.87	□□□□□ -0.19
NIF3L1-206	ENST00000416651	PLCG2	P16885	1265 aa		13.87	□□□□□ -0.19
NIF3L1-206	ENST00000416651	FBXO3	Q9UK99	471 aa		13.87	□□□□□ -0.19
NIF3L1-206	ENST00000416651	SETD5	Q9C0A6	1442 aa		13.87	□□□□□ -0.19
NIF3L1-206	ENST00000416651	PNPLA6	Q8IY17	1366 aa		13.86	□□□□□ -0.19
NIF3L1-206	ENST00000416651	TBX22	Q9Y458	520 aa		13.86	□□□□□ -0.19
NIF3L1-206	ENST00000416651	ABCC5	O15440	1437 aa		13.86	□□□□□ -0.19
NIF3L1-206	ENST00000416651	ATAD2	Q6PL18	1390 aa		13.85	□□□□□ -0.19
NIF3L1-206	ENST00000416651	ST18	O60284	1047 aa		13.85	□□□□□ -0.19
NIF3L1-206	ENST00000416651	NGLY1	Q96IV0	654 aa		13.85	□□□□□ -0.19
NIF3L1-206	ENST00000416651	NHSL1	Q5SYE7	1610 aa		13.85	□□□□□ -0.19
NIF3L1-206	ENST00000416651	GCC2	Q8IWJ2	1684 aa		13.85	□□□□□ -0.19
NIF3L1-206	ENST00000416651	PPP1R15A	O75807	674 aa	Predicted RBP	13.84	□□□□□ -0.19
NIF3L1-206	ENST00000416651	CHIC2	Q9UKJ5	165 aa		13.84	□□□□□ -0.19
NIF3L1-206	ENST00000416651	LMTK2	Q8IWU2	1503 aa		13.84	□□□□□ -0.19
NIF3L1-206	ENST00000416651	MST1R	Q04912	1400 aa		13.83	□□□□□ -0.2
NIF3L1-206	ENST00000416651	ERBIN	Q96RT1	1412 aa		13.83	□□□□□ -0.2
NIF3L1-206	ENST00000416651	NCOA3	Q9Y6Q9	1424 aa		13.83	□□□□□ -0.2
NIF3L1-206	ENST00000416651	AMOTL2	Q9Y2J4	779 aa		13.83	□□□□□ -0.2
NIF3L1-206	ENST00000416651	EP400	Q96L91	3159 aa		13.82	□□□□□ -0.2
NIF3L1-206	ENST00000416651	IRX5	P78411	483 aa	Predicted RBP	13.82	□□□□□ -0.2
NIF3L1-206	ENST00000416651	TMEM131L	A2VDJ0	1609 aa		13.82	□□□□□ -0.2
NIF3L1-206	ENST00000416651	CHGA	P10645	457 aa	Known RBP	13.81	□□□□□ -0.2
NIF3L1-206	ENST00000416651	DEFB132	Q7Z7B7	95 aa		13.81	□□□□□ -0.2
NIF3L1-206	ENST00000416651	USP21	Q9UK80	565 aa		13.81	□□□□□ -0.2
NIF3L1-206	ENST00000416651	KANK1	Q14678	1352 aa		13.81	□□□□□ -0.2
NIF3L1-206	ENST00000416651	MYOM3	Q5VTT5	1437 aa		13.81	□□□□□ -0.2
NIF3L1-206	ENST00000416651	CROCC2	H7BZ55	1655 aa		13.8	□□□□□ -0.2
NIF3L1-206	ENST00000416651	LRRC59	Q96AG4	307 aa	Known RBP	13.8	□□□□□ -0.2
NIF3L1-206	ENST00000416651	SLC52A1	Q9NWF4	448 aa		13.79	□□□□□ -0.2
NIF3L1-206	ENST00000416651	DCAF8	Q5TAQ9	597 aa		13.78	□□□□□ -0.2
NIF3L1-206	ENST00000416651	ATRN	O75882	1429 aa		13.78	□□□□□ -0.2
NIF3L1-206	ENST00000416651	DAPK1	P53355	1430 aa		13.76	□□□□□ -0.21
NIF3L1-206	ENST00000416651	OCEL1	Q9H607	264 aa		13.76	□□□□□ -0.21
NIF3L1-206	ENST00000416651	TRPM2	O94759	1503 aa		13.75	□□□□□ -0.21
NIF3L1-206	ENST00000416651	PSD	A5PKW4	1024 aa	Predicted RBP	13.75	□□□□□ -0.21
NIF3L1-206	ENST00000416651	PYGB	P11216	843 aa		13.75	□□□□□ -0.21
NIF3L1-206	ENST00000416651	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.75	□□□□□ -0.21
NIF3L1-206	ENST00000416651	TRPC5	Q9UL62	973 aa	Predicted RBP	13.75	□□□□□ -0.21
NIF3L1-206	ENST00000416651	ORAI2	Q96SN7	254 aa		13.74	□□□□□ -0.21
NIF3L1-206	ENST00000416651	BCL9L	Q86UU0	1499 aa		13.74	□□□□□ -0.21
NIF3L1-206	ENST00000416651	XRN1	Q8IZH2	1706 aa	Known RBP	13.73	□□□□□ -0.21
NIF3L1-206	ENST00000416651	NRXN3	Q9Y4C0	1643 aa		13.73	□□□□□ -0.21
NIF3L1-206	ENST00000416651	MET	P08581	1390 aa		13.72	□□□□□ -0.21
NIF3L1-206	ENST00000416651	PTPN23	Q9H3S7	1636 aa		13.72	□□□□□ -0.21
NIF3L1-206	ENST00000416651	UNC13B	O14795	1591 aa		13.72	□□□□□ -0.21
NIF3L1-206	ENST00000416651	DCC	P43146	1447 aa		13.72	□□□□□ -0.21
NIF3L1-206	ENST00000416651	PIK3R4	Q99570	1358 aa		13.71	□□□□□ -0.21
NIF3L1-206	ENST00000416651	NALCN	Q8IZF0	1738 aa		13.71	□□□□□ -0.21
NIF3L1-206	ENST00000416651	PCDHB8	Q9UN66	801 aa		13.71	□□□□□ -0.21
NIF3L1-206	ENST00000416651	C1orf167	Q5SNV9	1468 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms