RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
UBXN4-203ENST00000416538 TMEM132EQ6IEE7 984 aa22.39■■□□□ 1.17
UBXN4-203ENST00000416538 RGPD8O14715 1765 aaPredicted RBP22.39■■□□□ 1.17
UBXN4-203ENST00000416538 SPATA31A6Q5VVP1 1343 aa22.38■■□□□ 1.17
UBXN4-203ENST00000416538 ADGRB1O14514 1584 aa22.37■■□□□ 1.17
UBXN4-203ENST00000416538 PNPLA6Q8IY17 1366 aa22.37■■□□□ 1.17
UBXN4-203ENST00000416538 ABCC11Q96J66 1382 aa22.37■■□□□ 1.17
UBXN4-203ENST00000416538 ORAI2Q96SN7 254 aa22.36■■□□□ 1.17
UBXN4-203ENST00000416538 STK26Q9P289 416 aa22.36■■□□□ 1.17
UBXN4-203ENST00000416538 WAPLQ7Z5K2 1190 aa22.35■■□□□ 1.17
UBXN4-203ENST00000416538 COL22A1Q8NFW1 1626 aaPredicted RBP22.33■■□□□ 1.17
UBXN4-203ENST00000416538 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.17
UBXN4-203ENST00000416538 CFAP70Q5T0N1 1121 aa22.32■■□□□ 1.16
UBXN4-203ENST00000416538 PXDNQ92626 1479 aa22.31■■□□□ 1.16
UBXN4-203ENST00000416538 DLC1Q96QB1 1528 aa22.3■■□□□ 1.16
UBXN4-203ENST00000416538 SOS2Q07890 1332 aaPredicted RBP22.3■■□□□ 1.16
UBXN4-203ENST00000416538 KIF1AQ12756 1690 aa22.3■■□□□ 1.16
UBXN4-203ENST00000416538 USP32Q8NFA0 1604 aa22.29■■□□□ 1.16
UBXN4-203ENST00000416538 NUTM2BA6NNL0 878 aaPredicted RBP22.28■■□□□ 1.16
UBXN4-203ENST00000416538 NUTM2EB1AL46 878 aaPredicted RBP22.28■■□□□ 1.16
UBXN4-203ENST00000416538 HRCP23327 699 aa22.28■■□□□ 1.16
UBXN4-203ENST00000416538 NUTM2AQ8IVF1 878 aaPredicted RBP22.28■■□□□ 1.16
UBXN4-203ENST00000416538 ADGRB2O60241 1585 aa22.28■■□□□ 1.16
UBXN4-203ENST00000416538 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
UBXN4-203ENST00000416538 MARF1Q9Y4F3 1742 aaKnown RBP22.28■■□□□ 1.16
UBXN4-203ENST00000416538 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
UBXN4-203ENST00000416538 LRRC59Q96AG4 307 aaKnown RBP22.26■■□□□ 1.15
UBXN4-203ENST00000416538 MEX3CQ5U5Q3 659 aaKnown RBP22.25■■□□□ 1.15
UBXN4-203ENST00000416538 NUTM2FA1L443 756 aa22.24■■□□□ 1.15
UBXN4-203ENST00000416538 ESCO1Q5FWF5 840 aa22.21■■□□□ 1.15
UBXN4-203ENST00000416538 ABCA3Q99758 1704 aa22.2■■□□□ 1.14
UBXN4-203ENST00000416538 SIRT1Q96EB6 747 aa22.2■■□□□ 1.14
UBXN4-203ENST00000416538 AFF2P51816 1311 aa22.2■■□□□ 1.14
UBXN4-203ENST00000416538 XPCQ01831 940 aaPredicted RBP22.19■■□□□ 1.14
UBXN4-203ENST00000416538 KIAA1210Q9ULL0 1709 aa22.19■■□□□ 1.14
UBXN4-203ENST00000416538 NPHP3Q7Z494 1330 aa22.18■■□□□ 1.14
UBXN4-203ENST00000416538 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
UBXN4-203ENST00000416538 DCAF11Q8TEB1 546 aa22.18■■□□□ 1.14
UBXN4-203ENST00000416538 PRAM1Q96QH2 718 aa22.18■■□□□ 1.14
UBXN4-203ENST00000416538 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
UBXN4-203ENST00000416538 FOXO3O43524 673 aa22.17■■□□□ 1.14
UBXN4-203ENST00000416538 ZNF772Q68DY9 489 aaPredicted RBP22.16■■□□□ 1.14
UBXN4-203ENST00000416538 TRPM3Q9HCF6 1732 aaPredicted RBP22.15■■□□□ 1.14
UBXN4-203ENST00000416538 C8orf37Q96NL8 207 aa22.15■■□□□ 1.14
UBXN4-203ENST00000416538 ADAMTS2O95450 1211 aa22.13■■□□□ 1.13
UBXN4-203ENST00000416538 CDK12Q9NYV4 1490 aaPredicted RBP22.12■■□□□ 1.13
UBXN4-203ENST00000416538 TRAK1Q9UPV9 953 aa22.12■■□□□ 1.13
UBXN4-203ENST00000416538 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
UBXN4-203ENST00000416538 RGS12O14924 1447 aa22.11■■□□□ 1.13
UBXN4-203ENST00000416538 ANKARQ7Z5J8 1434 aa22.11■■□□□ 1.13
UBXN4-203ENST00000416538 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.1■■□□□ 1.13
UBXN4-203ENST00000416538 ITSN1Q15811 1721 aa22.09■■□□□ 1.13
UBXN4-203ENST00000416538 TOPAZ1Q8N9V7 1692 aa22.09■■□□□ 1.13
UBXN4-203ENST00000416538 ALS2Q96Q42 1657 aa22.09■■□□□ 1.13
UBXN4-203ENST00000416538 PRR36Q9H6K5 1346 aa22.08■■□□□ 1.13
UBXN4-203ENST00000416538 TNS3Q68CZ2 1445 aa22.08■■□□□ 1.13
UBXN4-203ENST00000416538 HIRIP3Q9BW71 556 aaPredicted RBP22.08■■□□□ 1.13
UBXN4-203ENST00000416538 POGKQ9P215 609 aa22.08■■□□□ 1.13
UBXN4-203ENST00000416538 CRYBG1Q9Y4K1 1723 aa22.08■■□□□ 1.12
UBXN4-203ENST00000416538 SPATA31A3Q5VYP0 1347 aa22.07■■□□□ 1.12
UBXN4-203ENST00000416538 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
UBXN4-203ENST00000416538 PHF8Q9UPP1 1060 aa22.07■■□□□ 1.12
UBXN4-203ENST00000416538 PLCH1Q4KWH8 1693 aa22.07■■□□□ 1.12
UBXN4-203ENST00000416538 ATP7BP35670 1465 aa22.06■■□□□ 1.12
UBXN4-203ENST00000416538 RXRBP28702 533 aa22.05■■□□□ 1.12
UBXN4-203ENST00000416538 STAC3Q96MF2 364 aa22.05■■□□□ 1.12
UBXN4-203ENST00000416538 NGLY1Q96IV0 654 aa22.04■■□□□ 1.12
UBXN4-203ENST00000416538 ATRNO75882 1429 aa22.04■■□□□ 1.12
UBXN4-203ENST00000416538 BCL9LQ86UU0 1499 aa22.03■■□□□ 1.12
UBXN4-203ENST00000416538 TRPM1Q7Z4N2 1603 aa22.03■■□□□ 1.12
UBXN4-203ENST00000416538 KRT28Q7Z3Y7 464 aa22.03■■□□□ 1.12
UBXN4-203ENST00000416538 QRICH2Q9H0J4 1663 aa22.01■■□□□ 1.11
UBXN4-203ENST00000416538 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
UBXN4-203ENST00000416538 QTRT2Q9H974 415 aaKnown RBP22.01■■□□□ 1.11
UBXN4-203ENST00000416538 SBNO1A3KN83 1393 aa22■■□□□ 1.11
UBXN4-203ENST00000416538 PMFBP1Q8TBY8 1022 aa22■■□□□ 1.11
UBXN4-203ENST00000416538 SLIT2O94813 1529 aa22■■□□□ 1.11
UBXN4-203ENST00000416538 GLI3P10071 1580 aa21.99■■□□□ 1.11
UBXN4-203ENST00000416538 NBPF1Q3BBV0 1214 aa21.99■■□□□ 1.11
UBXN4-203ENST00000416538 USP21Q9UK80 565 aa21.99■■□□□ 1.11
UBXN4-203ENST00000416538 NRAPQ86VF7 1730 aa21.99■■□□□ 1.11
UBXN4-203ENST00000416538 NWD2Q9ULI1 1742 aa21.99■■□□□ 1.11
UBXN4-203ENST00000416538 WASLO00401 505 aaPredicted RBP21.98■■□□□ 1.11
UBXN4-203ENST00000416538 RBM6P78332 1123 aaKnown RBP21.98■■□□□ 1.11
UBXN4-203ENST00000416538 EIF3AQ14152 1382 aaKnown RBP21.97■■□□□ 1.11
UBXN4-203ENST00000416538 CABLES1Q8TDN4 633 aa21.96■■□□□ 1.11
UBXN4-203ENST00000416538 BRWD3Q6RI45 1802 aa21.95■■□□□ 1.1
UBXN4-203ENST00000416538 UPF1Q92900 1129 aaKnown RBP eCLIP21.95■■□□□ 1.1
UBXN4-203ENST00000416538 SIN3AQ96ST3 1273 aa21.95■■□□□ 1.1
UBXN4-203ENST00000416538 PHRF1Q9P1Y6 1649 aaKnown RBP21.95■■□□□ 1.1
UBXN4-203ENST00000416538 ARHGEF10O15013 1369 aa21.93■■□□□ 1.1
UBXN4-203ENST00000416538 TRPC5Q9UL62 973 aaPredicted RBP21.93■■□□□ 1.1
UBXN4-203ENST00000416538 L3MBTL2Q969R5 705 aa21.92■■□□□ 1.1
UBXN4-203ENST00000416538 PLEKHG5O94827 1062 aa21.91■■□□□ 1.1
UBXN4-203ENST00000416538 PSME1Q06323 249 aa21.91■■□□□ 1.1
UBXN4-203ENST00000416538 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
UBXN4-203ENST00000416538 COL14A1Q05707 1796 aaKnown RBP21.89■■□□□ 1.09
UBXN4-203ENST00000416538 LMOD2Q6P5Q4 547 aa21.88■■□□□ 1.09
UBXN4-203ENST00000416538 NUDT16Q96DE0 195 aaKnown RBP21.88■■□□□ 1.09
UBXN4-203ENST00000416538 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms