RNA–Protein interactions for RNA: ENST00000416343.2

LINC01349-201, Transcript of long intergenic non-protein coding RNA 1349, humanhuman

TSL 3 BASIC

Gene LINC01349, Length 497 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01349-201ENST00000416343 DCAF1Q9Y4B6 1507 aa5.89□□□□□ -1.47
LINC01349-201ENST00000416343 FAM187AA6NFU0 413 aa5.89□□□□□ -1.47
LINC01349-201ENST00000416343 SMYD5Q6GMV2 418 aa5.89□□□□□ -1.47
LINC01349-201ENST00000416343 BRICD5Q6PL45 260 aa5.89□□□□□ -1.47
LINC01349-201ENST00000416343 AAASQ9NRG9 546 aa5.89□□□□□ -1.47
LINC01349-201ENST00000416343 DDX11L8A8MPP1 907 aa5.88□□□□□ -1.47
LINC01349-201ENST00000416343 AVPP01185 164 aa5.88□□□□□ -1.47
LINC01349-201ENST00000416343 TRIM26Q12899 539 aaPredicted RBP5.88□□□□□ -1.47
LINC01349-201ENST00000416343 NLRP7Q8WX94 980 aa5.88□□□□□ -1.47
LINC01349-201ENST00000416343 ACIN1Q9UKV3 1341 aaKnown RBP5.88□□□□□ -1.47
LINC01349-201ENST00000416343 ST8SIA5O15466 376 aa5.87□□□□□ -1.47
LINC01349-201ENST00000416343 WFS1O76024 890 aa5.87□□□□□ -1.47
LINC01349-201ENST00000416343 PLCB2Q00722 1185 aa5.87□□□□□ -1.47
LINC01349-201ENST00000416343 SULF1Q8IWU6 871 aa5.87□□□□□ -1.47
LINC01349-201ENST00000416343 RDH13Q8NBN7 331 aa5.87□□□□□ -1.47
LINC01349-201ENST00000416343 FCF1Q9Y324 198 aaKnown RBP5.87□□□□□ -1.47
LINC01349-201ENST00000416343 FMNL1O95466 1100 aaPredicted RBP5.86□□□□□ -1.47
LINC01349-201ENST00000416343 MSS51Q4VC12 460 aa5.86□□□□□ -1.47
LINC01349-201ENST00000416343 CD2BP2O95400 341 aaKnown RBP5.85□□□□□ -1.47
LINC01349-201ENST00000416343 FOXC1Q12948 553 aa5.85□□□□□ -1.47
LINC01349-201ENST00000416343 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
LINC01349-201ENST00000416343 PRDM9Q9NQV7 894 aa5.85□□□□□ -1.47
LINC01349-201ENST00000416343 CENPBP07199 599 aaPredicted RBP5.84□□□□□ -1.47
LINC01349-201ENST00000416343 SMCPP49901 116 aaPredicted RBP5.84□□□□□ -1.47
LINC01349-201ENST00000416343 RNF19BQ6ZMZ0 732 aa5.84□□□□□ -1.47
LINC01349-201ENST00000416343 DACH1Q9UI36 760 aa5.84□□□□□ -1.47
LINC01349-201ENST00000416343 CD46P15529 392 aa5.83□□□□□ -1.48
LINC01349-201ENST00000416343 MMP16P51512 607 aa5.83□□□□□ -1.48
LINC01349-201ENST00000416343 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
LINC01349-201ENST00000416343 CTC1Q2NKJ3 1217 aa5.82□□□□□ -1.48
LINC01349-201ENST00000416343 GPIHBP1Q8IV16 184 aa5.82□□□□□ -1.48
LINC01349-201ENST00000416343 WNT7AO00755 349 aa5.81□□□□□ -1.48
LINC01349-201ENST00000416343 DXOO77932 396 aaKnown RBP5.8□□□□□ -1.48
LINC01349-201ENST00000416343 MAP2K5Q13163 448 aa5.8□□□□□ -1.48
LINC01349-201ENST00000416343 Q3C1V9 767 aa5.8□□□□□ -1.48
LINC01349-201ENST00000416343 GRIPAP1Q4V328 841 aa5.8□□□□□ -1.48
LINC01349-201ENST00000416343 CYP4X1Q8N118 509 aa5.8□□□□□ -1.48
LINC01349-201ENST00000416343 KDM2AQ9Y2K7 1162 aa5.8□□□□□ -1.48
LINC01349-201ENST00000416343 IRF6O14896 467 aa5.79□□□□□ -1.48
LINC01349-201ENST00000416343 SMPD1P17405 629 aa5.79□□□□□ -1.48
LINC01349-201ENST00000416343 TRIM32Q13049 653 aa5.79□□□□□ -1.48
LINC01349-201ENST00000416343 GMPR2Q9P2T1 348 aaKnown RBP5.79□□□□□ -1.48
LINC01349-201ENST00000416343 AXIN1O15169 862 aa5.78□□□□□ -1.48
LINC01349-201ENST00000416343 KDM4AO75164 1064 aa5.78□□□□□ -1.48
LINC01349-201ENST00000416343 SNIP1Q8TAD8 396 aaKnown RBP5.78□□□□□ -1.48
LINC01349-201ENST00000416343 USB1Q9BQ65 265 aaKnown RBP5.78□□□□□ -1.48
LINC01349-201ENST00000416343 USP46P62068 366 aa5.77□□□□□ -1.49
LINC01349-201ENST00000416343 NEUROD1Q13562 356 aa5.77□□□□□ -1.49
LINC01349-201ENST00000416343 MRGPRX2Q96LB1 330 aa5.77□□□□□ -1.49
LINC01349-201ENST00000416343 GTF3C3Q9Y5Q9 886 aa5.77□□□□□ -1.49
LINC01349-201ENST00000416343 ZBTB24O43167 697 aaPredicted RBP5.76□□□□□ -1.49
LINC01349-201ENST00000416343 NFX1Q12986 1120 aaKnown RBP5.76□□□□□ -1.49
LINC01349-201ENST00000416343 HLA-CQ95604 372 aa5.76□□□□□ -1.49
LINC01349-201ENST00000416343 MINK1Q8N4C8 1332 aaPredicted RBP5.75□□□□□ -1.49
LINC01349-201ENST00000416343 TTC24A2A3L6 582 aaPredicted RBP5.75□□□□□ -1.49
LINC01349-201ENST00000416343 C11orf95C9JLR9 678 aaPredicted RBP5.75□□□□□ -1.49
LINC01349-201ENST00000416343 J3QL48 77 aa5.75□□□□□ -1.49
LINC01349-201ENST00000416343 HOXA2O43364 376 aa5.75□□□□□ -1.49
LINC01349-201ENST00000416343 SKOR1P84550 965 aa5.75□□□□□ -1.49
LINC01349-201ENST00000416343 MYO15BQ96JP2 1530 aa5.74□□□□□ -1.49
LINC01349-201ENST00000416343 CCDC180Q9P1Z9 1646 aa5.74□□□□□ -1.49
LINC01349-201ENST00000416343 SUPT5HO00267 1087 aaKnown RBP5.74□□□□□ -1.49
LINC01349-201ENST00000416343 MDM2Q00987 491 aaPredicted RBP5.74□□□□□ -1.49
LINC01349-201ENST00000416343 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
LINC01349-201ENST00000416343 ERICH6Q7L0X2 663 aa5.74□□□□□ -1.49
LINC01349-201ENST00000416343 WNT7BP56706 349 aa5.73□□□□□ -1.49
LINC01349-201ENST00000416343 REPIN1Q9BWE0 567 aaKnown RBP5.73□□□□□ -1.49
LINC01349-201ENST00000416343 BCL11AQ9H165 835 aa5.73□□□□□ -1.49
LINC01349-201ENST00000416343 ATP13A2Q9NQ11 1180 aa5.73□□□□□ -1.49
LINC01349-201ENST00000416343 FAM217BQ9NTX9 383 aaPredicted RBP5.73□□□□□ -1.49
LINC01349-201ENST00000416343 SNRPBP14678 240 aaKnown RBP5.72□□□□□ -1.49
LINC01349-201ENST00000416343 RC3H1Q5TC82 1133 aaKnown RBP5.72□□□□□ -1.49
LINC01349-201ENST00000416343 KCTD17Q8N5Z5 321 aa5.72□□□□□ -1.49
LINC01349-201ENST00000416343 HPS1Q92902 700 aa5.72□□□□□ -1.49
LINC01349-201ENST00000416343 TRIM47Q96LD4 638 aa5.72□□□□□ -1.49
LINC01349-201ENST00000416343 SIAH2O43255 324 aa5.71□□□□□ -1.5
LINC01349-201ENST00000416343 JUNDP17535 347 aa5.71□□□□□ -1.5
LINC01349-201ENST00000416343 GUCA2AQ02747 115 aa5.71□□□□□ -1.5
LINC01349-201ENST00000416343 CCDC102AQ96A19 550 aa5.71□□□□□ -1.5
LINC01349-201ENST00000416343 GPCPD1Q9NPB8 672 aa5.71□□□□□ -1.5
LINC01349-201ENST00000416343 CLCN1P35523 988 aa5.7□□□□□ -1.5
LINC01349-201ENST00000416343 PTCRAQ6ISU1 281 aaPredicted RBP5.7□□□□□ -1.5
LINC01349-201ENST00000416343 SYMPKQ92797 1274 aaKnown RBP5.7□□□□□ -1.5
LINC01349-201ENST00000416343 KRTAP4-12Q9BQ66 201 aa5.7□□□□□ -1.5
LINC01349-201ENST00000416343 RETREG3Q86VR2 466 aa5.69□□□□□ -1.5
LINC01349-201ENST00000416343 SENP2Q9HC62 589 aa5.69□□□□□ -1.5
LINC01349-201ENST00000416343 PCDHGC3Q9UN70 934 aa5.69□□□□□ -1.5
LINC01349-201ENST00000416343 CLSPNQ9HAW4 1339 aa5.69□□□□□ -1.5
LINC01349-201ENST00000416343 HAP1P54257 671 aaPredicted RBP5.68□□□□□ -1.5
LINC01349-201ENST00000416343 CCDC24Q8N4L8 307 aa5.68□□□□□ -1.5
LINC01349-201ENST00000416343 TERTO14746 1132 aaKnown RBP5.67□□□□□ -1.5
LINC01349-201ENST00000416343 VSIG10Q8N0Z9 540 aa5.67□□□□□ -1.5
LINC01349-201ENST00000416343 KIFC2Q96AC6 838 aa5.67□□□□□ -1.5
LINC01349-201ENST00000416343 ANP32EQ9BTT0 268 aa5.67□□□□□ -1.5
LINC01349-201ENST00000416343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.66□□□□□ -1.5
LINC01349-201ENST00000416343 NUDT12Q9BQG2 462 aa5.66□□□□□ -1.5
LINC01349-201ENST00000416343 TULP1O00294 542 aaPredicted RBP5.65□□□□□ -1.5
LINC01349-201ENST00000416343 ALDH1A1P00352 501 aa5.65□□□□□ -1.5
LINC01349-201ENST00000416343 FDX1P10109 184 aa5.65□□□□□ -1.5
LINC01349-201ENST00000416343 CCNYL3P0C7X3 344 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms