RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 NUTM2AQ8IVF1 878 aaPredicted RBP25.9■■□□□ 1.74
PDLIM2-208ENST00000416159 ZNF772Q68DY9 489 aaPredicted RBP25.89■■□□□ 1.74
PDLIM2-208ENST00000416159 WAPLQ7Z5K2 1190 aa25.89■■□□□ 1.74
PDLIM2-208ENST00000416159 SIRT1Q96EB6 747 aa25.87■■□□□ 1.73
PDLIM2-208ENST00000416159 YTHDC2Q9H6S0 1430 aaKnown RBP25.87■■□□□ 1.73
PDLIM2-208ENST00000416159 MYOM2P54296 1465 aa25.86■■□□□ 1.73
PDLIM2-208ENST00000416159 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
PDLIM2-208ENST00000416159 CDC42BPGQ6DT37 1551 aa25.86■■□□□ 1.73
PDLIM2-208ENST00000416159 SOS2Q07890 1332 aaPredicted RBP25.86■■□□□ 1.73
PDLIM2-208ENST00000416159 LAMC1P11047 1609 aa25.85■■□□□ 1.73
PDLIM2-208ENST00000416159 KNDC1Q76NI1 1749 aa25.85■■□□□ 1.73
PDLIM2-208ENST00000416159 PNPLA6Q8IY17 1366 aa25.84■■□□□ 1.73
PDLIM2-208ENST00000416159 CFAP70Q5T0N1 1121 aa25.84■■□□□ 1.73
PDLIM2-208ENST00000416159 DHX57Q6P158 1386 aaKnown RBP25.83■■□□□ 1.73
PDLIM2-208ENST00000416159 ESCO1Q5FWF5 840 aa25.83■■□□□ 1.73
PDLIM2-208ENST00000416159 PLEKHH1Q9ULM0 1364 aa25.82■■□□□ 1.72
PDLIM2-208ENST00000416159 NPHP3Q7Z494 1330 aa25.79■■□□□ 1.72
PDLIM2-208ENST00000416159 STAC3Q96MF2 364 aa25.78■■□□□ 1.72
PDLIM2-208ENST00000416159 NUTM2FA1L443 756 aa25.76■■□□□ 1.71
PDLIM2-208ENST00000416159 AFF2P51816 1311 aa25.76■■□□□ 1.71
PDLIM2-208ENST00000416159 FOXO3O43524 673 aa25.74■■□□□ 1.71
PDLIM2-208ENST00000416159 DCAF11Q8TEB1 546 aa25.74■■□□□ 1.71
PDLIM2-208ENST00000416159 KDM2AQ9Y2K7 1162 aa25.74■■□□□ 1.71
PDLIM2-208ENST00000416159 RXRBP28702 533 aa25.73■■□□□ 1.71
PDLIM2-208ENST00000416159 C8orf37Q96NL8 207 aa25.73■■□□□ 1.71
PDLIM2-208ENST00000416159 PRAM1Q96QH2 718 aa25.71■■□□□ 1.71
PDLIM2-208ENST00000416159 FMN2Q9NZ56 1722 aa25.71■■□□□ 1.71
PDLIM2-208ENST00000416159 ADAMTS2O95450 1211 aa25.7■■□□□ 1.7
PDLIM2-208ENST00000416159 POGKQ9P215 609 aa25.7■■□□□ 1.7
PDLIM2-208ENST00000416159 DLC1Q96QB1 1528 aa25.69■■□□□ 1.7
PDLIM2-208ENST00000416159 NGLY1Q96IV0 654 aa25.69■■□□□ 1.7
PDLIM2-208ENST00000416159 PXDNQ92626 1479 aa25.68■■□□□ 1.7
PDLIM2-208ENST00000416159 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.7
PDLIM2-208ENST00000416159 XPCQ01831 940 aaPredicted RBP25.67■■□□□ 1.7
PDLIM2-208ENST00000416159 QTRT2Q9H974 415 aaKnown RBP25.67■■□□□ 1.7
PDLIM2-208ENST00000416159 ADGRB1O14514 1584 aa25.66■■□□□ 1.7
PDLIM2-208ENST00000416159 COL22A1Q8NFW1 1626 aaPredicted RBP25.66■■□□□ 1.7
PDLIM2-208ENST00000416159 TRAK1Q9UPV9 953 aa25.65■■□□□ 1.7
PDLIM2-208ENST00000416159 KIF1AQ12756 1690 aa25.64■■□□□ 1.7
PDLIM2-208ENST00000416159 CDK12Q9NYV4 1490 aaPredicted RBP25.64■■□□□ 1.69
PDLIM2-208ENST00000416159 RBM6P78332 1123 aaKnown RBP25.63■■□□□ 1.69
PDLIM2-208ENST00000416159 PHF8Q9UPP1 1060 aa25.63■■□□□ 1.69
PDLIM2-208ENST00000416159 KRT28Q7Z3Y7 464 aa25.62■■□□□ 1.69
PDLIM2-208ENST00000416159 RGPD8O14715 1765 aaPredicted RBP25.6■■□□□ 1.69
PDLIM2-208ENST00000416159 FNBP4Q8N3X1 1017 aaPredicted RBP25.6■■□□□ 1.69
PDLIM2-208ENST00000416159 USP21Q9UK80 565 aa25.6■■□□□ 1.69
PDLIM2-208ENST00000416159 SPATA31A3Q5VYP0 1347 aa25.6■■□□□ 1.69
PDLIM2-208ENST00000416159 PSME1Q06323 249 aa25.59■■□□□ 1.69
PDLIM2-208ENST00000416159 ANKARQ7Z5J8 1434 aa25.57■■□□□ 1.68
PDLIM2-208ENST00000416159 ADGRB2O60241 1585 aa25.56■■□□□ 1.68
PDLIM2-208ENST00000416159 TRPC5Q9UL62 973 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-208ENST00000416159 HIRIP3Q9BW71 556 aaPredicted RBP25.55■■□□□ 1.68
PDLIM2-208ENST00000416159 MINK1Q8N4C8 1332 aaPredicted RBP25.55■■□□□ 1.68
PDLIM2-208ENST00000416159 EIF3AQ14152 1382 aaKnown RBP25.55■■□□□ 1.68
PDLIM2-208ENST00000416159 UPF1Q92900 1129 aaKnown RBP eCLIP25.53■■□□□ 1.68
PDLIM2-208ENST00000416159 WASLO00401 505 aaPredicted RBP25.52■■□□□ 1.68
PDLIM2-208ENST00000416159 SBNO1A3KN83 1393 aa25.52■■□□□ 1.68
PDLIM2-208ENST00000416159 PMFBP1Q8TBY8 1022 aa25.51■■□□□ 1.67
PDLIM2-208ENST00000416159 TNS3Q68CZ2 1445 aa25.51■■□□□ 1.67
PDLIM2-208ENST00000416159 MARF1Q9Y4F3 1742 aaKnown RBP25.51■■□□□ 1.67
PDLIM2-208ENST00000416159 RGS12O14924 1447 aa25.5■■□□□ 1.67
PDLIM2-208ENST00000416159 USP32Q8NFA0 1604 aa25.49■■□□□ 1.67
PDLIM2-208ENST00000416159 ATRNO75882 1429 aa25.49■■□□□ 1.67
PDLIM2-208ENST00000416159 PRR36Q9H6K5 1346 aa25.47■■□□□ 1.67
PDLIM2-208ENST00000416159 HAP1P54257 671 aaPredicted RBP25.47■■□□□ 1.67
PDLIM2-208ENST00000416159 TULP4Q9NRJ4 1543 aa25.47■■□□□ 1.67
PDLIM2-208ENST00000416159 BCL9LQ86UU0 1499 aa25.47■■□□□ 1.67
PDLIM2-208ENST00000416159 ARHGEF10O15013 1369 aa25.46■■□□□ 1.67
PDLIM2-208ENST00000416159 LMOD2Q6P5Q4 547 aa25.46■■□□□ 1.67
PDLIM2-208ENST00000416159 ARHGEF28Q8N1W1 1705 aaKnown RBP25.46■■□□□ 1.67
PDLIM2-208ENST00000416159 KIAA1210Q9ULL0 1709 aa25.46■■□□□ 1.67
PDLIM2-208ENST00000416159 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
PDLIM2-208ENST00000416159 UNC5CLQ8IV45 518 aa25.42■■□□□ 1.66
PDLIM2-208ENST00000416159 CABLES1Q8TDN4 633 aa25.42■■□□□ 1.66
PDLIM2-208ENST00000416159 NBPF1Q3BBV0 1214 aa25.41■■□□□ 1.66
PDLIM2-208ENST00000416159 NGDNQ8NEJ9 315 aaKnown RBP25.41■■□□□ 1.66
PDLIM2-208ENST00000416159 GJD4Q96KN9 370 aaPredicted RBP25.41■■□□□ 1.66
PDLIM2-208ENST00000416159 SLIT2O94813 1529 aa25.41■■□□□ 1.66
PDLIM2-208ENST00000416159 NUDT16Q96DE0 195 aaKnown RBP25.4■■□□□ 1.66
PDLIM2-208ENST00000416159 PLEKHG5O94827 1062 aa25.39■■□□□ 1.66
PDLIM2-208ENST00000416159 CDK19Q9BWU1 502 aa25.38■■□□□ 1.65
PDLIM2-208ENST00000416159 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.37■■□□□ 1.65
PDLIM2-208ENST00000416159 L3MBTL2Q969R5 705 aa25.36■■□□□ 1.65
PDLIM2-208ENST00000416159 TRPM3Q9HCF6 1732 aaPredicted RBP25.36■■□□□ 1.65
PDLIM2-208ENST00000416159 ATAD2Q6PL18 1390 aa25.35■■□□□ 1.65
PDLIM2-208ENST00000416159 SIN3AQ96ST3 1273 aa25.35■■□□□ 1.65
PDLIM2-208ENST00000416159 ATP7BP35670 1465 aa25.34■■□□□ 1.65
PDLIM2-208ENST00000416159 ITSN1Q15811 1721 aa25.34■■□□□ 1.65
PDLIM2-208ENST00000416159 ABCA3Q99758 1704 aa25.32■■□□□ 1.64
PDLIM2-208ENST00000416159 PAK3O75914 559 aaPredicted RBP25.32■■□□□ 1.64
PDLIM2-208ENST00000416159 CCDC61Q9Y6R9 512 aa25.32■■□□□ 1.64
PDLIM2-208ENST00000416159 ALS2Q96Q42 1657 aa25.32■■□□□ 1.64
PDLIM2-208ENST00000416159 FAM83GA6ND36 823 aa25.31■■□□□ 1.64
PDLIM2-208ENST00000416159 VPS72Q15906 364 aa25.31■■□□□ 1.64
PDLIM2-208ENST00000416159 CENPJQ9HC77 1338 aaPredicted RBP25.31■■□□□ 1.64
PDLIM2-208ENST00000416159 RALGAPBQ86X10 1494 aa25.3■■□□□ 1.64
PDLIM2-208ENST00000416159 NEUROD1Q13562 356 aa25.3■■□□□ 1.64
PDLIM2-208ENST00000416159 NWD2Q9ULI1 1742 aa25.29■■□□□ 1.64
PDLIM2-208ENST00000416159 PLEKHG3A1L390 1219 aa25.28■■□□□ 1.64
PDLIM2-208ENST00000416159 ACEP12821 1306 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms