RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 PTCH1Q13635 1447 aa11.74□□□□□ -0.53
MECP2-204ENST00000415944 LRPPRCP42704 1394 aaKnown RBP11.73□□□□□ -0.53
MECP2-204ENST00000415944 YTHDC2Q9H6S0 1430 aaKnown RBP11.73□□□□□ -0.53
MECP2-204ENST00000415944 MRS2Q9HD23 443 aa11.73□□□□□ -0.53
MECP2-204ENST00000415944 ARHGEF28Q8N1W1 1705 aaKnown RBP11.72□□□□□ -0.53
MECP2-204ENST00000415944 DLC1Q96QB1 1528 aa11.72□□□□□ -0.53
MECP2-204ENST00000415944 LRRC7Q96NW7 1537 aa11.71□□□□□ -0.53
MECP2-204ENST00000415944 ABCC11Q96J66 1382 aa11.71□□□□□ -0.53
MECP2-204ENST00000415944 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.53
MECP2-204ENST00000415944 C11orf95C9JLR9 678 aaPredicted RBP11.71□□□□□ -0.53
MECP2-204ENST00000415944 SUPT16HQ9Y5B9 1047 aaKnown RBP11.71□□□□□ -0.53
MECP2-204ENST00000415944 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
MECP2-204ENST00000415944 HNRNPUQ00839 825 aaKnown RBP eCLIP11.7□□□□□ -0.54
MECP2-204ENST00000415944 AMOTL2Q9Y2J4 779 aa11.7□□□□□ -0.54
MECP2-204ENST00000415944 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
MECP2-204ENST00000415944 NPC1L1Q9UHC9 1359 aa11.69□□□□□ -0.54
MECP2-204ENST00000415944 TMEM132EQ6IEE7 984 aa11.69□□□□□ -0.54
MECP2-204ENST00000415944 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
MECP2-204ENST00000415944 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
MECP2-204ENST00000415944 ROBO2Q9HCK4 1378 aa11.68□□□□□ -0.54
MECP2-204ENST00000415944 SBNO2Q9Y2G9 1366 aa11.68□□□□□ -0.54
MECP2-204ENST00000415944 NBPF1Q3BBV0 1214 aa11.68□□□□□ -0.54
MECP2-204ENST00000415944 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
MECP2-204ENST00000415944 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
MECP2-204ENST00000415944 NALCNQ8IZF0 1738 aa11.68□□□□□ -0.54
MECP2-204ENST00000415944 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
MECP2-204ENST00000415944 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
MECP2-204ENST00000415944 PDE3BQ13370 1112 aa11.66□□□□□ -0.54
MECP2-204ENST00000415944 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.66□□□□□ -0.54
MECP2-204ENST00000415944 TMEM94Q12767 1356 aa11.66□□□□□ -0.54
MECP2-204ENST00000415944 NGEFQ8N5V2 710 aa11.65□□□□□ -0.54
MECP2-204ENST00000415944 ADGRB2O60241 1585 aa11.65□□□□□ -0.54
MECP2-204ENST00000415944 PARD3Q8TEW0 1356 aa11.65□□□□□ -0.55
MECP2-204ENST00000415944 ADGRL3Q9HAR2 1447 aa11.64□□□□□ -0.55
MECP2-204ENST00000415944 PROSER2Q86WR7 435 aaPredicted RBP11.64□□□□□ -0.55
MECP2-204ENST00000415944 TESK2Q96S53 571 aa11.64□□□□□ -0.55
MECP2-204ENST00000415944 STK26Q9P289 416 aa11.64□□□□□ -0.55
MECP2-204ENST00000415944 QRICH2Q9H0J4 1663 aa11.64□□□□□ -0.55
MECP2-204ENST00000415944 PLEKHH1Q9ULM0 1364 aa11.64□□□□□ -0.55
MECP2-204ENST00000415944 CDC42BPGQ6DT37 1551 aa11.63□□□□□ -0.55
MECP2-204ENST00000415944 DCCP43146 1447 aa11.63□□□□□ -0.55
MECP2-204ENST00000415944 CERKQ8TCT0 537 aa11.62□□□□□ -0.55
MECP2-204ENST00000415944 TRAK1Q9UPV9 953 aa11.62□□□□□ -0.55
MECP2-204ENST00000415944 SMG6Q86US8 1419 aaKnown RBP11.61□□□□□ -0.55
MECP2-204ENST00000415944 PNISRQ8TF01 805 aaKnown RBP11.61□□□□□ -0.55
MECP2-204ENST00000415944 PRAM1Q96QH2 718 aa11.61□□□□□ -0.55
MECP2-204ENST00000415944 FMN2Q9NZ56 1722 aa11.6□□□□□ -0.55
MECP2-204ENST00000415944 MSH6P52701 1360 aa11.6□□□□□ -0.55
MECP2-204ENST00000415944 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
MECP2-204ENST00000415944 WAPLQ7Z5K2 1190 aa11.6□□□□□ -0.55
MECP2-204ENST00000415944 FKBP8Q14318 412 aa11.59□□□□□ -0.55
MECP2-204ENST00000415944 FAM9BQ8IZU0 186 aa11.59□□□□□ -0.55
MECP2-204ENST00000415944 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
MECP2-204ENST00000415944 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
MECP2-204ENST00000415944 CENPJQ9HC77 1338 aaPredicted RBP11.59□□□□□ -0.55
MECP2-204ENST00000415944 C19orf44Q9H6X5 657 aa11.58□□□□□ -0.56
MECP2-204ENST00000415944 POGKQ9P215 609 aa11.58□□□□□ -0.56
MECP2-204ENST00000415944 TULP4Q9NRJ4 1543 aa11.57□□□□□ -0.56
MECP2-204ENST00000415944 POLR3GLQ9BT43 218 aa11.57□□□□□ -0.56
MECP2-204ENST00000415944 NINLQ9Y2I6 1382 aa11.56□□□□□ -0.56
MECP2-204ENST00000415944 MYT1Q01538 1121 aa11.56□□□□□ -0.56
MECP2-204ENST00000415944 MST1RQ04912 1400 aa11.56□□□□□ -0.56
MECP2-204ENST00000415944 NUDCQ9Y266 331 aa11.56□□□□□ -0.56
MECP2-204ENST00000415944 USP32Q8NFA0 1604 aa11.56□□□□□ -0.56
MECP2-204ENST00000415944 RGPD8O14715 1765 aaPredicted RBP11.55□□□□□ -0.56
MECP2-204ENST00000415944 SAFB2Q14151 953 aaKnown RBP eCLIP11.55□□□□□ -0.56
MECP2-204ENST00000415944 C14orf37Q86TY3 774 aa11.55□□□□□ -0.56
MECP2-204ENST00000415944 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
MECP2-204ENST00000415944 PPP4R2Q9NY27 417 aa11.55□□□□□ -0.56
MECP2-204ENST00000415944 TOPAZ1Q8N9V7 1692 aa11.55□□□□□ -0.56
MECP2-204ENST00000415944 MINK1Q8N4C8 1332 aaPredicted RBP11.55□□□□□ -0.56
MECP2-204ENST00000415944 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
MECP2-204ENST00000415944 ANKARQ7Z5J8 1434 aa11.54□□□□□ -0.56
MECP2-204ENST00000415944 DISP3Q9P2K9 1392 aa11.54□□□□□ -0.56
MECP2-204ENST00000415944 C1orf167Q5SNV9 1468 aa11.53□□□□□ -0.56
MECP2-204ENST00000415944 ATF3P18847 181 aa11.53□□□□□ -0.56
MECP2-204ENST00000415944 PANK3Q9H999 370 aa11.53□□□□□ -0.56
MECP2-204ENST00000415944 RNF123Q5XPI4 1314 aa11.53□□□□□ -0.56
MECP2-204ENST00000415944 ROBO1Q9Y6N7 1651 aa11.52□□□□□ -0.56
MECP2-204ENST00000415944 ATP7BP35670 1465 aa11.52□□□□□ -0.56
MECP2-204ENST00000415944 WASLO00401 505 aaPredicted RBP11.52□□□□□ -0.57
MECP2-204ENST00000415944 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
MECP2-204ENST00000415944 KIF1AQ12756 1690 aa11.52□□□□□ -0.57
MECP2-204ENST00000415944 UBAP1LF5GYI3 381 aa11.51□□□□□ -0.57
MECP2-204ENST00000415944 TOM1O60784 492 aa11.51□□□□□ -0.57
MECP2-204ENST00000415944 NSD2O96028 1365 aa11.51□□□□□ -0.57
MECP2-204ENST00000415944 NHSL1Q5SYE7 1610 aa11.5□□□□□ -0.57
MECP2-204ENST00000415944 EVC2Q86UK5 1308 aa11.5□□□□□ -0.57
MECP2-204ENST00000415944 SLAIN2Q9P270 581 aa11.49□□□□□ -0.57
MECP2-204ENST00000415944 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
MECP2-204ENST00000415944 BLMP54132 1417 aaPredicted RBP11.49□□□□□ -0.57
MECP2-204ENST00000415944 AHDC1Q5TGY3 1603 aaPredicted RBP11.49□□□□□ -0.57
MECP2-204ENST00000415944 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
MECP2-204ENST00000415944 CDK19Q9BWU1 502 aa11.48□□□□□ -0.57
MECP2-204ENST00000415944 MYOM1P52179 1685 aa11.47□□□□□ -0.57
MECP2-204ENST00000415944 ATAD2Q6PL18 1390 aa11.47□□□□□ -0.57
MECP2-204ENST00000415944 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
MECP2-204ENST00000415944 AKAP12Q02952 1782 aa11.46□□□□□ -0.57
MECP2-204ENST00000415944 WDR43Q15061 677 aaKnown RBP eCLIP11.46□□□□□ -0.57
MECP2-204ENST00000415944 BRINP3Q76B58 766 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms