RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 CDC42BPGQ6DT37 1551 aa18.58■□□□□ 0.56
NCKIPSD-203ENST00000415281 KNDC1Q76NI1 1749 aa18.57■□□□□ 0.56
NCKIPSD-203ENST00000415281 LRPPRCP42704 1394 aaKnown RBP18.57■□□□□ 0.56
NCKIPSD-203ENST00000415281 ABCC11Q96J66 1382 aa18.57■□□□□ 0.56
NCKIPSD-203ENST00000415281 ANKRD30BQ9BXX2 1392 aa18.57■□□□□ 0.56
NCKIPSD-203ENST00000415281 NRXN1Q9ULB1 1477 aa18.57■□□□□ 0.56
NCKIPSD-203ENST00000415281 STK26Q9P289 416 aa18.56■□□□□ 0.56
NCKIPSD-203ENST00000415281 COL22A1Q8NFW1 1626 aaPredicted RBP18.55■□□□□ 0.56
NCKIPSD-203ENST00000415281 C14orf93Q9H972 538 aaKnown RBP18.54■□□□□ 0.56
NCKIPSD-203ENST00000415281 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
NCKIPSD-203ENST00000415281 PXDNQ92626 1479 aa18.53■□□□□ 0.56
NCKIPSD-203ENST00000415281 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
NCKIPSD-203ENST00000415281 FMN2Q9NZ56 1722 aa18.52■□□□□ 0.56
NCKIPSD-203ENST00000415281 RXRBP28702 533 aa18.52■□□□□ 0.56
NCKIPSD-203ENST00000415281 UPF1Q92900 1129 aaKnown RBP eCLIP18.52■□□□□ 0.56
NCKIPSD-203ENST00000415281 RGPD8O14715 1765 aaPredicted RBP18.52■□□□□ 0.55
NCKIPSD-203ENST00000415281 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
NCKIPSD-203ENST00000415281 C8orf37Q96NL8 207 aa18.51■□□□□ 0.55
NCKIPSD-203ENST00000415281 CDK12Q9NYV4 1490 aaPredicted RBP18.51■□□□□ 0.55
NCKIPSD-203ENST00000415281 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
NCKIPSD-203ENST00000415281 ESCO1Q5FWF5 840 aa18.5■□□□□ 0.55
NCKIPSD-203ENST00000415281 SIRT1Q96EB6 747 aa18.5■□□□□ 0.55
NCKIPSD-203ENST00000415281 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
NCKIPSD-203ENST00000415281 QTRT2Q9H974 415 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-203ENST00000415281 MYOM2P54296 1465 aa18.49■□□□□ 0.55
NCKIPSD-203ENST00000415281 FOXO3O43524 673 aa18.48■□□□□ 0.55
NCKIPSD-203ENST00000415281 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-203ENST00000415281 RGS12O14924 1447 aa18.47■□□□□ 0.55
NCKIPSD-203ENST00000415281 FNBP4Q8N3X1 1017 aaPredicted RBP18.46■□□□□ 0.55
NCKIPSD-203ENST00000415281 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-203ENST00000415281 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
NCKIPSD-203ENST00000415281 ADGRB1O14514 1584 aa18.45■□□□□ 0.54
NCKIPSD-203ENST00000415281 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-203ENST00000415281 RBM6P78332 1123 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-203ENST00000415281 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
NCKIPSD-203ENST00000415281 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
NCKIPSD-203ENST00000415281 BCL9LQ86UU0 1499 aa18.42■□□□□ 0.54
NCKIPSD-203ENST00000415281 USP21Q9UK80 565 aa18.41■□□□□ 0.54
NCKIPSD-203ENST00000415281 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
NCKIPSD-203ENST00000415281 ATRNO75882 1429 aa18.4■□□□□ 0.54
NCKIPSD-203ENST00000415281 DLC1Q96QB1 1528 aa18.4■□□□□ 0.54
NCKIPSD-203ENST00000415281 SPATA31A3Q5VYP0 1347 aa18.4■□□□□ 0.54
NCKIPSD-203ENST00000415281 KIF1AQ12756 1690 aa18.4■□□□□ 0.54
NCKIPSD-203ENST00000415281 HRCP23327 699 aa18.39■□□□□ 0.53
NCKIPSD-203ENST00000415281 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
NCKIPSD-203ENST00000415281 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
NCKIPSD-203ENST00000415281 EP400Q96L91 3159 aa18.38■□□□□ 0.53
NCKIPSD-203ENST00000415281 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
NCKIPSD-203ENST00000415281 PHF8Q9UPP1 1060 aa18.36■□□□□ 0.53
NCKIPSD-203ENST00000415281 ADGRB2O60241 1585 aa18.35■□□□□ 0.53
NCKIPSD-203ENST00000415281 TRPC5Q9UL62 973 aaPredicted RBP18.35■□□□□ 0.53
NCKIPSD-203ENST00000415281 PRR36Q9H6K5 1346 aa18.34■□□□□ 0.53
NCKIPSD-203ENST00000415281 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
NCKIPSD-203ENST00000415281 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
NCKIPSD-203ENST00000415281 SLIT2O94813 1529 aa18.33■□□□□ 0.53
NCKIPSD-203ENST00000415281 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.52
NCKIPSD-203ENST00000415281 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.52
NCKIPSD-203ENST00000415281 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
NCKIPSD-203ENST00000415281 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
NCKIPSD-203ENST00000415281 CABLES1Q8TDN4 633 aa18.32■□□□□ 0.52
NCKIPSD-203ENST00000415281 GLI3P10071 1580 aa18.32■□□□□ 0.52
NCKIPSD-203ENST00000415281 PMFBP1Q8TBY8 1022 aa18.3■□□□□ 0.52
NCKIPSD-203ENST00000415281 HIRIP3Q9BW71 556 aaPredicted RBP18.3■□□□□ 0.52
NCKIPSD-203ENST00000415281 TNS3Q68CZ2 1445 aa18.3■□□□□ 0.52
NCKIPSD-203ENST00000415281 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
NCKIPSD-203ENST00000415281 GJD4Q96KN9 370 aaPredicted RBP18.29■□□□□ 0.52
NCKIPSD-203ENST00000415281 POGKQ9P215 609 aa18.29■□□□□ 0.52
NCKIPSD-203ENST00000415281 ANKARQ7Z5J8 1434 aa18.29■□□□□ 0.52
NCKIPSD-203ENST00000415281 ARHGEF28Q8N1W1 1705 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-203ENST00000415281 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
NCKIPSD-203ENST00000415281 MINK1Q8N4C8 1332 aaPredicted RBP18.27■□□□□ 0.52
NCKIPSD-203ENST00000415281 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
NCKIPSD-203ENST00000415281 BRWD3Q6RI45 1802 aa18.27■□□□□ 0.52
NCKIPSD-203ENST00000415281 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
NCKIPSD-203ENST00000415281 RALGAPBQ86X10 1494 aa18.26■□□□□ 0.51
NCKIPSD-203ENST00000415281 PLCH1Q4KWH8 1693 aa18.25■□□□□ 0.51
NCKIPSD-203ENST00000415281 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
NCKIPSD-203ENST00000415281 PSME1Q06323 249 aa18.25■□□□□ 0.51
NCKIPSD-203ENST00000415281 STAC3Q96MF2 364 aa18.25■□□□□ 0.51
NCKIPSD-203ENST00000415281 TULP4Q9NRJ4 1543 aa18.24■□□□□ 0.51
NCKIPSD-203ENST00000415281 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
NCKIPSD-203ENST00000415281 FAM83GA6ND36 823 aa18.23■□□□□ 0.51
NCKIPSD-203ENST00000415281 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
NCKIPSD-203ENST00000415281 NWD2Q9ULI1 1742 aa18.23■□□□□ 0.51
NCKIPSD-203ENST00000415281 NRAPQ86VF7 1730 aa18.21■□□□□ 0.51
NCKIPSD-203ENST00000415281 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
NCKIPSD-203ENST00000415281 ONECUT3O60422 494 aaPredicted RBP18.21■□□□□ 0.51
NCKIPSD-203ENST00000415281 PLEKHG5O94827 1062 aa18.21■□□□□ 0.51
NCKIPSD-203ENST00000415281 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
NCKIPSD-203ENST00000415281 ATP7BP35670 1465 aa18.2■□□□□ 0.5
NCKIPSD-203ENST00000415281 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
NCKIPSD-203ENST00000415281 VPS72Q15906 364 aa18.19■□□□□ 0.5
NCKIPSD-203ENST00000415281 LMOD2Q6P5Q4 547 aa18.18■□□□□ 0.5
NCKIPSD-203ENST00000415281 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
NCKIPSD-203ENST00000415281 TOPAZ1Q8N9V7 1692 aa18.17■□□□□ 0.5
NCKIPSD-203ENST00000415281 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
NCKIPSD-203ENST00000415281 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
NCKIPSD-203ENST00000415281 SEPT12Q8IYM1 358 aa18.14■□□□□ 0.49
NCKIPSD-203ENST00000415281 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
NCKIPSD-203ENST00000415281 EIF3AQ14152 1382 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms